Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_08g0008040 | OGI:08023430 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr08:8875815-8882446 | ||||||||
| Gene Symbol | SCR8, OsSCR8 | ||||||||||
| DNA seq | ATGGCGGAGATCGCCGTGAGTTTGGTTGGGAGTTTGATCGCCGGCATCTCGACGCTGGTGGAGAAGGAGGCCACCTTGCTGCAGAGCGTGCCGGAGAATACCAGGTAATCAATTAGGATGAGCCGGCGCCGCACATAGAGTTTTTCTGTCTCCTCCACTCGCTTTTCTTCATGAACATGAGCATCGGTTCTTGCAATGTGCCAACAGAACTGACAAATGGAGAAGACAAAACACATCAGACCATTATCTAAGAAAAAAAAACACATTAGATCATGAGAGCAATTAGCTCTTTTATGACAATTTCACTGTTAAGAGCATGTGACAGTCATTTTCTTTTTTTGCTTTGTTCTAATATCCCTAAATTAGTCACTTTTAAAAATTAATTATTGAGTAATCATTATGGACAAAAGGTTAAAATTGGACAATATTTAAGGCAGTATGATGCAGAAATAGGTAAAAGTTTATTAGCTTATGGCTTTATGAAAATAGCGCATTTGGAGTACAGAACAAAATGCATTTGTAAAATATAGAGTCAATATATGTAAGGTGGTGTTGGTCACAAACTCCTACTTTGGATAATCTTCAAAAGTTCCCTGAATGTCCACAGTTATTACAGAGAAAACCAAATAACAGTAGACAGTTCCCAGAAAGCAAACAACAAACAAATCTAAATATTTATGTGTATTATGGTATATCACGAACTAATAGGAGTTTGGTGAAGCGATCTAAGTTTTAAAAAGATATTAGATCCTAAAAAGAAAAAAAAAGGGAAAACACTGTGCATGATCTTAAATCAATTTTGCACTACCTCCGGTCAGGAATATTTAACACCTGCGCTGCTGCGATTAGTGACACTGGCATCAAATATTCTTGACTGGATGGAGTACTTATCTTTCTGAAGAAATCCTAATGTTTCTATGTTCAGAGGCAGACAGGTAGGTCCCTAAACTATACAAATAAATATTTAGACCTATAATGTTTTAGTGTGAACAATAACTACATATATAAGTATACAAGATAATATATAGGGCTAAAAGATGTTATATTATACACAACTAAATAATAATAGGCATTAGATTTGATTGTGTGACTAATTAGTATCGGTATCATAATAACAAGTTGGCTCGAGTTTTTAACGAGCTGAACTGAGCTCTACTTTCAGTTCAGTTATCTAAACGGCCAAGCCAAGCAAGCTTATTCTCCTATCAAGTTTTAACAAGCTGAGCCGAGTAAAGCCAACTTGTTAATTGTTATCCACCCCTAGTAGTTGTGTCCCCATGCCAATGACTCAAGATATAAACAATGACTGAATAGAAACTAGGGATGGTTTAGCAGTTATTTTCCACCATTAGGAGTAAATGGCATGAGCTGACAATTAGGGCCTGCTGGTCAGCGATACAGAGAAAATTAATATAGAATCGCGAATCAACTTGATTCAGCTTGCTGGTGGGGAGGATTTGTTGGGGCTCAGGATGACTAGAGGGAAGGGAAGCTGTTCAGTGTTCACCTGTCACGCGGACCAATGCTCACTGAAACAATTGAATCAATAAAATTAGGAAAGTTATGTGGAAACGAACTTGGAATAAGAACAATTGTTTCGATAAAACTAGCAGGGTGGCCCGCGCAATTGCGCGGCTAGCACCCAAACAAAATCATTTTTTTTTAAGTATGATTTTACTTAAAAATTTATTAAATAGCTATCTCATTGTCTTAAGAGTTTGAAAGACCAAACCTTATAATCCCCGTGTTTCTAATTATATTGTTTTTTAAAAGTCACACCAGTTGCTACCCCTTATGTCATCTCCTTCTTTATTTGCTTGCTCGATCTACCACTATTTCTATTCATTCTCCTTGGAACCTTTAAAAATTGGATCTTATAGTTTTTAGAGTTTATTGTCACGTTGGGTTTCGTTTTTATAATTTCTAGACCTCCCGTCAAATGTTGCCATTTTACTCCTCTATGGCACATCCTCTGTCTCTTCTCTTTATTGTCATTGAGATTTTAAAAATCGAACATAATTATCGTTTGGATTCATTTTTACTTTCTAGAAGTCCCGCCAAACCGTAAGCGGCTTTGCCATTGTAGTTCTCTACGGCTCGCCCGCTGCCTCCCTTCTTTATTGTCATTGAGATTTTAAAATCGAACATTATTATCATTGTTTTTTTTTACTTTTAGAAGTTCCGAACCTTTAAAAATTGAACCATGTAGTTTTTAGAGTTTATTGTCTTGTTGGGTTTCATTTTTTATAATTTTTAGAAGTCTCGTCAAACGATGCCACTGTGCTCCTCTACGGCCCGTCCACCGCCTACTCTTTATTATCATTGTGATTCTAAAAATTGAACATAACTATCGTTGGAATTCATTTTTTATTTTCTAGAAGTCCCGTCAACTGTCGGCAGCTCTGCAACTATACTCCTATACACCCCGCCCGCTGCTTCTCTTTTTTATTTTCATTGAGATTTTAAAATTCGAATATGATTATCAATAGTTTTTTTTTTACTTTCTATAAGTCCCGGCAATCGCCTTGCTCGTTTGCTTCACAGCATGCCTGTCGTCCCTCCTTTTAATCGTCATTAGGATTCTATTTGGTGTTTTGTTAACAGTTTTTATATGTCGTATCAACCGCCAGCACTCTACTCCTTTATAGCCATGATACTTAATTTATGTCGTCGTGTGTTTTAGATGGTCTTTTCTTTCAATAGTCTTTATTTTTATCACAAATTTTAGTTATTTATAAATTGTATTCCTAATTGAAATCTTTTTTCTTTTTCTAATTTCTGAATTTATTTTTTTCGTATTGTGTTCTTTTGATATTTTTATTTTTTATTTTCATTTTTAGTTGTTTCAAAATTGTATTCCTACTTTAACTCTCTTTTTTATTTGCCTAATTTTGGATTTTATTTTATTTTTATTCCGAATTTAATTAATCTACCAATTTTAATTAATCTCGTATTGGGTTCTTATATGGACTCTTCTTTTAATATTCCTTATTTTTAATTCCGAATTTCAGCTATTTTAAAATTGTAGCCCTACTTGAACTATCCTTTTCTTTTCAAATTTTGGATTTTATTTTATTTTTATTTCAAATTTTGATTGATCTCGTATTGGGTTCTTATATGGAAACTTCTTTCAATATTGCTTATTTTTAATTCCGAATTTCAGCTATTTTTAAATTATATTTCTACTTTTTTTTCTCCTTTTATTTTTTTCTAATTTTGAATTTTATTTTATTTTTATTTCGAATTTTGATTAATCTCGTATTGGGTTCTTATATGGAAACTTGTTCAATATTGCTTCTTTTTAATTCCGAATTTCAGCTATTTTTAGATTGTATTTCTACTTGGACTCTCCTTCCTTTTTTGACAAAAACTTTTGGTAGGCTACAGAATTATTTCCAGTGATCTATCGTGTAGGTGTTGATAGCAAGATGGATGAATGCACGTGATTTTAGAGTGGCAGCAAGATTATCTGGGCAAGTGAACTTTTGGTAGCTACAAAATACTCTTCCGTGGACTGTGCATCTTTTTTGTTTTCCTTTCCTTCTGTGGATTGTGTTTTTTTTTCCTTTTTGTCCACACCCAATCGGACATACCCTTGCCTAGATACTATTAGGACTCTGACATGCATGATGCATGCTCGTTAGAATTTTTGTTTCGTACTTATACCTTTCCTATTTATGTATTATATAAATAGAGTTTGTTTCGTACCAATAGAAATATTGCCCAACAAATCTACACCCTTTAATCTATATGCACTATATAATCTAAAGGTGTAGCTTTTTTCTCTTTTTCTCCGATTAATGTGGGAATTTCTAGCCTCAACAGCGAACGTGATGCCTCCTTTCAAGACTGTTTTAATAATATAATAGATAGATTCCTGGTAAATTACGGAAACTATATGTTGTCTAAAATTTTTATTTTTGTTTGTTCTACAAAAAAAAGTGAATACACTGAGGAACATTTAGTTGTTTCCAACAAGCAGGTTCGTCAAGGATGAGCTTCAAACAATTGGAGCATTTCTTGGTGTTGTTGAAAACATGAAGGAGGATTCCCCGAAGTATCAGATGGCTAGAGTTTGGGCGGAGCAAGTGAAGGATTTGGCTTATGATATGGAAGATTGCCTAGAGGAACAAATCACTGCCCTCACTACTAGAAATTCAAGTTGGTCTCAATATGTAACCAATTACAGAGCTCTCCGTCCTTTTGCTGCCAAGTTAAGTGATCTCAAATCAAGGATAGTTGAGGTGAGCGAGAGAAATATGCGTTATCATCTTGTCATTGCTGACCAAGTCATCGACAATCATATGAATTTTATGGTGGCTTTGAACAAAGTGTTGTCTCGCTCTGTGGAAGGCACTACTGACAATTGGACGCAAAATGTGGTTACATGGGCTGAAGCTCCTGAAGAATCTGCATCAAACGACAAAACCTGTGCTCCCAAAGTGACTGCAGTAGTTGGCATGTTTGGCTCAGGCTCTACTCGTGTTTCTGAGATATACAAGAGGCATAAAGCTGATAAAAAATATGATTCCTATGTGTGGATCGAATTGTCGCAAGATGTGAATGTCACAAAGGTATTCAAGGATATGATGAAGCAACTCTTTGATGATTCTTCAAGTCAGCCTGAATATACTGGAGAAGATGAGCTAGCCCATGGTATTCAACACGAACTCAAACAAAAACGGTTCTTGGTCGTGTTTGATGAGTTGTGGACGACACATGCATGGCATAGCATAAAAAAGGCACTCCCTCATGTTAGTAGAAGTGGCAGCCAGGTCATTGTAACAACAGAGATCGTTCATGTTGCAAAAGGCTGCACCGAATCAGATGATCATGTTTATTGGGTCCAACTGTTATCAAAACAAGAATCATTTGAGCGTTTTAAGAATTTGATTCTTGTAACAGAAAACTCAAAAATGACTCATGAAGATAGAGAGGACTTCGAAGACCTGGACCTAAAGGAACTAGACAGACTCAAGGTACTTGAACCGCCCTTCAATACAATTGAACAGATACTAAGAAAATGTCGTGGACTAGAATTGGCTATAGGAACTGTAGCCAAGTTACTTGCCTCAAAGTCTCCTCACAAGTGGGGAAAACTATGTGATGATCTTCCTTCATTACTCTACAGTAACCACCCAATGCTCAAAGATATATGGAAAGTAATGATTCAGAGGTACAAAGATCTACCGCCTTATCTCAAGCCATGCTTCTTATACCTGAGCATTTTCCCAGAGAACTCTGACATCAATGTGGAGACTATAATAGACCGATGGTTAGCTGAAGGGCTTGTGAGGGATAGAACTGGAATGAGCCCTAGGACTGTTGCAAAATGGTATTTGTTGTGGCTCATTGATCGAAGCATGATTATGGTATCCAACCTGAGAAAGAACAGATCATTTAAGACATGCTGGATCCATCCCATGATGCGAGATATCCTGGTCATGATTTCACAAGAGGAGAAATTTTCAATCACTGTTGGTCCAAGAAAGAGTTCAAGTTTGTTAGTAAAGCGTTTGCCCCATGTAACACTTGATGGTGGGAGTGGCAGGAAGTTAGCTAGATATGTGGATCTTTCTGGCATCAGGTCACTAACAGTGTTCAACGAACCATCAGAATCCATTGCTGCACTTATTTGCTCCTCTAAACTTAGAGCAGTACGCATTTTAGATTTGTCAAATGCCAATGAGTTTAAAATCACTAGAAGAGATATAGAGCGCGTAGGAGAACTGTGTCACTTGAGGTACCTAAATCTTTACAAAACAAATATTTGTGAGCTTCCTTCGTCAATAGGCATGCTCCCGTTCCTGCAACTGCTAAACGTGAGAAAGACAAGGATCACAAAACTTCCTAATGAGGTCACTCAACTCGGCAAGCTACAACTCCTTCGTGCTAGCAGAAGAACAGAAGATTCCTGTCACAATAGAAGGAACCGATGCTGCATTGATTCAGCTCTAACAGTGCCTAAAGGGATAGAGAACCTGCAGGACATAGAAAGGCTGGATATCATGGATATCAAGGACAACAGTGGCTCAGAAATTGAAGCTTTGGGGAAACTTGCTAGGTTGGAGCACCTTGGATTGGCAGGCATTACAATTGGCAACAGCAAACAAGTCTCCAAAACCCTAAAAAGGATTTCTTCTTCGCTGACCTATTTGTACCTCGGAGCATGCCAAAGTGATGGAACACTTGCTTGCCTGCCCATCTCTGAAAAGAAAAGGAAGAAGCCACTGGAGTTTCCACGCCTCCAAACCATAAAGCTTGACGGTCATATTGGAAAAATGCCATACTGGATTTCTAACTCATGGACACTTGCGGTTATTAAACTTTACAGGACTAATCTCCAACAGAATCATATAATGTCCCTTGAGAAACTACCCTGCTTGGTCACACTTGCTCTCCTAGACAATTCATATATTAGCGAGACATTGGTTTTCTATGATAAGGCCTTCAGAGAGCTCAAGACCCTGGAGATTATTAGGCTAACCAAGTTGAAAACAGTTATATTTACAGAAGAAGCAGTGCCCCAGCTTCGAAGTTTAGCCATCAGATGTTGCGAATTGAGATTAAAAGGAAAAAACAACCTTAAACTCCGGAAGGTTGATCTTGATGATGGTGTCGAAGAGGTATAA
More
|
||||||||||
| CDS seq | ATGGCGGAGATCGCCGTGAGTTTGGTTGGGAGTTTGATCGCCGGCATCTCGACGCTGGTGGAGAAGGAGGCCACCTTGCTGCAGAGCGTGCCGGAGAATACCAGGTTCGTCAAGGATGAGCTTCAAACAATTGGAGCATTTCTTGGTGTTGTTGAAAACATGAAGGAGGATTCCCCGAAGTATCAGATGGCTAGAGTTTGGGCGGAGCAAGTGAAGGATTTGGCTTATGATATGGAAGATTGCCTAGAGGAACAAATCACTGCCCTCACTACTAGAAATTCAAGTTGGTCTCAATATGTAACCAATTACAGAGCTCTCCGTCCTTTTGCTGCCAAGTTAAGTGATCTCAAATCAAGGATAGTTGAGGTGAGCGAGAGAAATATGCGTTATCATCTTGTCATTGCTGACCAAGTCATCGACAATCATATGAATTTTATGGTGGCTTTGAACAAAGTGTTGTCTCGCTCTGTGGAAGGCACTACTGACAATTGGACGCAAAATGTGGTTACATGGGCTGAAGCTCCTGAAGAATCTGCATCAAACGACAAAACCTGTGCTCCCAAAGTGACTGCAGTAGTTGGCATGTTTGGCTCAGGCTCTACTCGTGTTTCTGAGATATACAAGAGGCATAAAGCTGATAAAAAATATGATTCCTATGTGTGGATCGAATTGTCGCAAGATGTGAATGTCACAAAGGTATTCAAGGATATGATGAAGCAACTCTTTGATGATTCTTCAAGTCAGCCTGAATATACTGGAGAAGATGAGCTAGCCCATGGTATTCAACACGAACTCAAACAAAAACGGTTCTTGGTCGTGTTTGATGAGTTGTGGACGACACATGCATGGCATAGCATAAAAAAGGCACTCCCTCATGTTAGTAGAAGTGGCAGCCAGGTCATTGTAACAACAGAGATCGTTCATGTTGCAAAAGGCTGCACCGAATCAGATGATCATGTTTATTGGGTCCAACTGTTATCAAAACAAGAATCATTTGAGCGTTTTAAGAATTTGATTCTTGTAACAGAAAACTCAAAAATGACTCATGAAGATAGAGAGGACTTCGAAGACCTGGACCTAAAGGAACTAGACAGACTCAAGGTACTTGAACCGCCCTTCAATACAATTGAACAGATACTAAGAAAATGTCGTGGACTAGAATTGGCTATAGGAACTGTAGCCAAGTTACTTGCCTCAAAGTCTCCTCACAAGTGGGGAAAACTATGTGATGATCTTCCTTCATTACTCTACAGTAACCACCCAATGCTCAAAGATATATGGAAAGTAATGATTCAGAGGTACAAAGATCTACCGCCTTATCTCAAGCCATGCTTCTTATACCTGAGCATTTTCCCAGAGAACTCTGACATCAATGTGGAGACTATAATAGACCGATGGTTAGCTGAAGGGCTTGTGAGGGATAGAACTGGAATGAGCCCTAGGACTGTTGCAAAATGGTATTTGTTGTGGCTCATTGATCGAAGCATGATTATGGTATCCAACCTGAGAAAGAACAGATCATTTAAGACATGCTGGATCCATCCCATGATGCGAGATATCCTGGTCATGATTTCACAAGAGGAGAAATTTTCAATCACTGTTGGTCCAAGAAAGAGTTCAAGTTTGTTAGTAAAGCGTTTGCCCCATGTAACACTTGATGGTGGGAGTGGCAGGAAGTTAGCTAGATATGTGGATCTTTCTGGCATCAGGTCACTAACAGTGTTCAACGAACCATCAGAATCCATTGCTGCACTTATTTGCTCCTCTAAACTTAGAGCAGTACGCATTTTAGATTTGTCAAATGCCAATGAGTTTAAAATCACTAGAAGAGATATAGAGCGCGTAGGAGAACTGTGTCACTTGAGGTACCTAAATCTTTACAAAACAAATATTTGTGAGCTTCCTTCGTCAATAGGCATGCTCCCGTTCCTGCAACTGCTAAACGTGAGAAAGACAAGGATCACAAAACTTCCTAATGAGGTCACTCAACTCGGCAAGCTACAACTCCTTCGTGCTAGCAGAAGAACAGAAGATTCCTGTCACAATAGAAGGAACCGATGCTGCATTGATTCAGCTCTAACAGTGCCTAAAGGGATAGAGAACCTGCAGGACATAGAAAGGCTGGATATCATGGATATCAAGGACAACAGTGGCTCAGAAATTGAAGCTTTGGGGAAACTTGCTAGGTTGGAGCACCTTGGATTGGCAGGCATTACAATTGGCAACAGCAAACAAGTCTCCAAAACCCTAAAAAGGATTTCTTCTTCGCTGACCTATTTGTACCTCGGAGCATGCCAAAGTGATGGAACACTTGCTTGCCTGCCCATCTCTGAAAAGAAAAGGAAGAAGCCACTGGAGTTTCCACGCCTCCAAACCATAAAGCTTGACGGTCATATTGGAAAAATGCCATACTGGATTTCTAACTCATGGACACTTGCGGTTATTAAACTTTACAGGACTAATCTCCAACAGAATCATATAATGTCCCTTGAGAAACTACCCTGCTTGGTCACACTTGCTCTCCTAGACAATTCATATATTAGCGAGACATTGGTTTTCTATGATAAGGCCTTCAGAGAGCTCAAGACCCTGGAGATTATTAGGCTAACCAAGTTGAAAACAGTTATATTTACAGAAGAAGCAGTGCCCCAGCTTCGAAGTTTAGCCATCAGATGTTGCGAATTGAGATTAAAAGGAAAAAACAACCTTAAACTCCGGAAGGTTGATCTTGATGATGGTGTCGAAGAGGTATAA
More
|
||||||||||
| Protein seq | MAEIAVSLVGSLIAGISTLVEKEATLLQSVPENTRFVKDELQTIGAFLGVVENMKEDSPKYQMARVWAEQVKDLAYDMEDCLEEQITALTTRNSSWSQYVTNYRALRPFAAKLSDLKSRIVEVSERNMRYHLVIADQVIDNHMNFMVALNKVLSRSVEGTTDNWTQNVVTWAEAPEESASNDKTCAPKVTAVVGMFGSGSTRVSEIYKRHKADKKYDSYVWIELSQDVNVTKVFKDMMKQLFDDSSSQPEYTGEDELAHGIQHELKQKRFLVVFDELWTTHAWHSIKKALPHVSRSGSQVIVTTEIVHVAKGCTESDDHVYWVQLLSKQESFERFKNLILVTENSKMTHEDREDFEDLDLKELDRLKVLEPPFNTIEQILRKCRGLELAIGTVAKLLASKSPHKWGKLCDDLPSLLYSNHPMLKDIWKVMIQRYKDLPPYLKPCFLYLSIFPENSDINVETIIDRWLAEGLVRDRTGMSPRTVAKWYLLWLIDRSMIMVSNLRKNRSFKTCWIHPMMRDILVMISQEEKFSITVGPRKSSSLLVKRLPHVTLDGGSGRKLARYVDLSGIRSLTVFNEPSESIAALICSSKLRAVRILDLSNANEFKITRRDIERVGELCHLRYLNLYKTNICELPSSIGMLPFLQLLNVRKTRITKLPNEVTQLGKLQLLRASRRTEDSCHNRRNRCCIDSALTVPKGIENLQDIERLDIMDIKDNSGSEIEALGKLARLEHLGLAGITIGNSKQVSKTLKRISSSLTYLYLGACQSDGTLACLPISEKKRKKPLEFPRLQTIKLDGHIGKMPYWISNSWTLAVIKLYRTNLQQNHIMSLEKLPCLVTLALLDNSYISETLVFYDKAFRELKTLEIIRLTKLKTVIFTEEAVPQLRSLAIRCCELRLKGKNNLKLRKVDLDDGVEEV |
||||||||||
| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_08g0008040 | OsARC_08g0008040.01 | Chr08 | 8875815 | 8882446 | + | NAM | ||
| CDS seq | ATGGCGGAGATCGCCGTGAGTTTGGTTGGGAGTTTGATCGCCGGCATCTCGACGCTGGTGGAGAAGGAGGCCACCTTGCTGCAGAGCGTGCCGGAGAATACCAGGTTCGTCAAGGATGAGCTTCAAACAATTGGAGCATTTCTTGGTGTTGTTGAAAACATGAAGGAGGATTCCCCGAAGTATCAGATGGCTAGAGTTTGGGCGGAGCAAGTGAAGGATTTGGCTTATGATATGGAAGATTGCCTAGAGGAACAAATCACTGCCCTCACTACTAGAAATTCAAGTTGGTCTCAATATGTAACCAATTACAGAGCTCTCCGTCCTTTTGCTGCCAAGTTAAGTGATCTCAAATCAAGGATAGTTGAGGTGAGCGAGAGAAATATGCGTTATCATCTTGTCATTGCTGACCAAGTCATCGACAATCATATGAATTTTATGGTGGCTTTGAACAAAGTGTTGTCTCGCTCTGTGGAAGGCACTACTGACAATTGGACGCAAAATGTGGTTACATGGGCTGAAGCTCCTGAAGAATCTGCATCAAACGACAAAACCTGTGCTCCCAAAGTGACTGCAGTAGTTGGCATGTTTGGCTCAGGCTCTACTCGTGTTTCTGAGATATACAAGAGGCATAAAGCTGATAAAAAATATGATTCCTATGTGTGGATCGAATTGTCGCAAGATGTGAATGTCACAAAGGTATTCAAGGATATGATGAAGCAACTCTTTGATGATTCTTCAAGTCAGCCTGAATATACTGGAGAAGATGAGCTAGCCCATGGTATTCAACACGAACTCAAACAAAAACGGTTCTTGGTCGTGTTTGATGAGTTGTGGACGACACATGCATGGCATAGCATAAAAAAGGCACTCCCTCATGTTAGTAGAAGTGGCAGCCAGGTCATTGTAACAACAGAGATCGTTCATGTTGCAAAAGGCTGCACCGAATCAGATGATCATGTTTATTGGGTCCAACTGTTATCAAAACAAGAATCATTTGAGCGTTTTAAGAATTTGATTCTTGTAACAGAAAACTCAAAAATGACTCATGAAGATAGAGAGGACTTCGAAGACCTGGACCTAAAGGAACTAGACAGACTCAAGGTACTTGAACCGCCCTTCAATACAATTGAACAGATACTAAGAAAATGTCGTGGACTAGAATTGGCTATAGGAACTGTAGCCAAGTTACTTGCCTCAAAGTCTCCTCACAAGTGGGGAAAACTATGTGATGATCTTCCTTCATTACTCTACAGTAACCACCCAATGCTCAAAGATATATGGAAAGTAATGATTCAGAGGTACAAAGATCTACCGCCTTATCTCAAGCCATGCTTCTTATACCTGAGCATTTTCCCAGAGAACTCTGACATCAATGTGGAGACTATAATAGACCGATGGTTAGCTGAAGGGCTTGTGAGGGATAGAACTGGAATGAGCCCTAGGACTGTTGCAAAATGGTATTTGTTGTGGCTCATTGATCGAAGCATGATTATGGTATCCAACCTGAGAAAGAACAGATCATTTAAGACATGCTGGATCCATCCCATGATGCGAGATATCCTGGTCATGATTTCACAAGAGGAGAAATTTTCAATCACTGTTGGTCCAAGAAAGAGTTCAAGTTTGTTAGTAAAGCGTTTGCCCCATGTAACACTTGATGGTGGGAGTGGCAGGAAGTTAGCTAGATATGTGGATCTTTCTGGCATCAGGTCACTAACAGTGTTCAACGAACCATCAGAATCCATTGCTGCACTTATTTGCTCCTCTAAACTTAGAGCAGTACGCATTTTAGATTTGTCAAATGCCAATGAGTTTAAAATCACTAGAAGAGATATAGAGCGCGTAGGAGAACTGTGTCACTTGAGGTACCTAAATCTTTACAAAACAAATATTTGTGAGCTTCCTTCGTCAATAGGCATGCTCCCGTTCCTGCAACTGCTAAACGTGAGAAAGACAAGGATCACAAAACTTCCTAATGAGGTCACTCAACTCGGCAAGCTACAACTCCTTCGTGCTAGCAGAAGAACAGAAGATTCCTGTCACAATAGAAGGAACCGATGCTGCATTGATTCAGCTCTAACAGTGCCTAAAGGGATAGAGAACCTGCAGGACATAGAAAGGCTGGATATCATGGATATCAAGGACAACAGTGGCTCAGAAATTGAAGCTTTGGGGAAACTTGCTAGGTTGGAGCACCTTGGATTGGCAGGCATTACAATTGGCAACAGCAAACAAGTCTCCAAAACCCTAAAAAGGATTTCTTCTTCGCTGACCTATTTGTACCTCGGAGCATGCCAAAGTGATGGAACACTTGCTTGCCTGCCCATCTCTGAAAAGAAAAGGAAGAAGCCACTGGAGTTTCCACGCCTCCAAACCATAAAGCTTGACGGTCATATTGGAAAAATGCCATACTGGATTTCTAACTCATGGACACTTGCGGTTATTAAACTTTACAGGACTAATCTCCAACAGAATCATATAATGTCCCTTGAGAAACTACCCTGCTTGGTCACACTTGCTCTCCTAGACAATTCATATATTAGCGAGACATTGGTTTTCTATGATAAGGCCTTCAGAGAGCTCAAGACCCTGGAGATTATTAGGCTAACCAAGTTGAAAACAGTTATATTTACAGAAGAAGCAGTGCCCCAGCTTCGAAGTTTAGCCATCAGATGTTGCGAATTGAGATTAAAAGGAAAAAACAACCTTAAACTCCGGAAGGTTGATCTTGATGATGGTGTCGAAGAGGTATAA
More
|
|||||||
| Protein seq | MAEIAVSLVGSLIAGISTLVEKEATLLQSVPENTRFVKDELQTIGAFLGVVENMKEDSPKYQMARVWAEQVKDLAYDMEDCLEEQITALTTRNSSWSQYVTNYRALRPFAAKLSDLKSRIVEVSERNMRYHLVIADQVIDNHMNFMVALNKVLSRSVEGTTDNWTQNVVTWAEAPEESASNDKTCAPKVTAVVGMFGSGSTRVSEIYKRHKADKKYDSYVWIELSQDVNVTKVFKDMMKQLFDDSSSQPEYTGEDELAHGIQHELKQKRFLVVFDELWTTHAWHSIKKALPHVSRSGSQVIVTTEIVHVAKGCTESDDHVYWVQLLSKQESFERFKNLILVTENSKMTHEDREDFEDLDLKELDRLKVLEPPFNTIEQILRKCRGLELAIGTVAKLLASKSPHKWGKLCDDLPSLLYSNHPMLKDIWKVMIQRYKDLPPYLKPCFLYLSIFPENSDINVETIIDRWLAEGLVRDRTGMSPRTVAKWYLLWLIDRSMIMVSNLRKNRSFKTCWIHPMMRDILVMISQEEKFSITVGPRKSSSLLVKRLPHVTLDGGSGRKLARYVDLSGIRSLTVFNEPSESIAALICSSKLRAVRILDLSNANEFKITRRDIERVGELCHLRYLNLYKTNICELPSSIGMLPFLQLLNVRKTRITKLPNEVTQLGKLQLLRASRRTEDSCHNRRNRCCIDSALTVPKGIENLQDIERLDIMDIKDNSGSEIEALGKLARLEHLGLAGITIGNSKQVSKTLKRISSSLTYLYLGACQSDGTLACLPISEKKRKKPLEFPRLQTIKLDGHIGKMPYWISNSWTLAVIKLYRTNLQQNHIMSLEKLPCLVTLALLDNSYISETLVFYDKAFRELKTLEIIRLTKLKTVIFTEEAVPQLRSLAIRCCELRLKGKNNLKLRKVDLDDGVEEV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0235651 | RBH | 0.101392 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g13800 | RBH | 0.056235 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0235651 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0007890 | RBH | 0.137735 | 0.0 | 0.918855 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0007960 | RBH | 0.046647 | 0.390490 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0008030 | RBH | 0.000000 | 0.881560 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0007910 | RBH | 0.0 | 0.0 | 1.018865 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0131700 | RBH | 0.178978 | 0.357427 | 0.338754 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0007890 | RBH | 0.0 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0125300 | RBH | 0.2313875 | 0.328739 | 0.9497725 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0007520 | RBH | 0.042991 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0007610 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0007450 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0008140 | RBH | 0.120674 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0007550 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G007840 | RBH | 0.112916 | 0.000000 | 0.128847 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0007680 | RBH | 0.000000 | 0.0 | 0.000000 |
