Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_08g0005400 | OGI:08011640 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr08:4641188-4646167 | ||||||||
| Gene Symbol | DGK2, OsDGK2 | ||||||||||
| DNA seq | TACACAAATATACAATCTAGAAAAATAAATATCAACAGTTTAATAACTTTATTTTCTTCCCAAAATAACACAAATTTCTGCTGAACAATAAACAAGAAATCAGAAATGTTACCAACTTGGGTTCTACTATAGATGTTCCAAACCTATGGTCTATACATTCCAAATTTTGCAGTGAACGAATTACTAAATTCCACTCTTATAATGTTGAAGGAATCGAAGACAAAAATCACTTTACTGAAGAAGATTATGAACATCAAGAATGCAACCTAGAAAAGATACCAATTCTGAGTTCAGCTGAGGTGAGCAATGTCAACCTCGTCAGGGATCTTGAACGTATCTGCGGCACCAAACTTCCTCCTGCCATCCTCCCACTCATCTTCGTCCTCCATGCTGTCCTTGTCGTCGTCGTTGTTGCCATGGCCGCTGTGTTGCGCGTGGGAGGATTGGTCGTCATGGACGCTCTTCGACTTGCAGGGCTCGTTGGCAAGCATGGTGACCTGACCAAGGTGGGAGATCTCCACAACAACAGTGTCGTCATCTTTTGGGAGGGGCTGCTTCCATGGCTCCCCATCGATCCTCATGAAGGTGTGCTCTGCTGCGCCTTTGTGGAACTCGAAACGGATCCTTTGGGCCTGATTTTGAAGGATGTCCACATAAGCTTGAATGGAGAGGACTATACTAGTTCTAGTTCTTGACGTAGAAAATTATGACTACGGCACAATGGGGAAGAAGTGGTTTTCAGTTCTGGGATGTCAAATGGACAAAATGGAAGCACTTTTACATATACTTCATACCTGCGCAAGGCGGGTACCATGTCCATTTGGGGCCAGCAAGACAAGTCCGTGCCAGGCATCACGGAATCCAACAACCTCAATAAGTCTATCATCGACAAAAGGTGCCGTCAGCTCCCTCTGTAGATTTTGTTTTTTCAAGACAGAGGTTTGATTATTAGTTCCTCTGAAGATTTCCAGTAAATAATCTGTGAATAGCTACAATGCGAAATTCACGTGTTGAATGACAAGCGTAGTGCATGTAAACTCACCTCTTCTACTTTCCTTGTGCCAGGTGTGCCCCAAGGATTCAGACCTCCAGAGAAACTAGGCAGGTTGAGACAGACGATTGATCGAATGCTGCAAGAGGCAGTAGTACACAGGTCACAACTTTGCTCATAGATTATGGTAGCATCCTCCATCAACAAGCAGAACATAAATCAGAAATGTTGCCAACATGTGCAAGCAAGAAATCCAAGGAACATATTGTAACTTGCAAGGAAGCAAAACTGAAACAGTATATCCGAGTTTTTCTTCTCTTCTGTTTTCTTTTCTTTTCGATTCAGTTCTTTTTACAGCTTTCAAAGTAATGTATACTGCTTCCAATCTTAATAGAAAAGATACGCAAGCCTTTTGCGTATCCCAAAAAAGAAACAGTATAAGCAAAATATTCCAAGTGCAAATGAGAAGCTTTCTTGTATCATATCATACTAGTAGGCTCAAATAACAGTACACGAGGGAAAAAATAATCCGTAGTACAACAAAAGGAATGAACAATGTTTACCTGTGGTGAATGTTAAGTTCTTGCCAGTGGCTACCGGCTCTTTTCATGATTTTCACACTTGCAAGTTGAGCAATATTCCTGGAAATGAAGCACTCAACCTTACAACCAAAACGAAAAGAAGGAAACAACTTGAACGCACACAAATTGATTACACCAAATTTCAAATTTAACATTGCCAAGTACAGGTTTAAGCTTTGACAATAAATTTTGTGGACTGAATCTATAAACTGCAAGGATAGTGCTAATATGAAGGAACAAAAAAGGGCACAAATGAATTGATTGGTGTAGTTTGTAAATGCAATGTACATTGAACACCCCCAAAAATGCTGGAGTGGGTATACTCCCTATAACTTCTCTCTCCACATTACTCACAGATATTTATAGGAGTTAGGTGGTATAATATTAAATAAGAGACACCTTGACTGCAAAGATAACACAATACAAGTATACAACTAGCACAACAGGTATACCATGAAATATGTTAATGATAAATCAACAAGCTACCTTGAAGATGGATGACTTAAAGAAGCACAAAACCATCCTTGTTTAAGTCCAACCTTAGCATATGTACCCTGTATAGATTAAATGGATTAACACCTGGCAAAGTTAAGTCATTCAGCCAGATTGAAATTGACTAGAGGGACATTTATCTAAATCAATATAGAAGTAAATTTCACATATTTACAGGTATATTAGCTATCAAGGATTACATATTTAGGAATCAATTTGACAGAACTAGAGATGTAAGTGCAATATTTTGTAACAACTACAGTTAAGAATTCCAGTAACATGCAATGGGTATTGGTCCCATTCGACACTTCCTCACTTCTCATAGCTCATAAAAGTTCTCTATAGTAAGATCCCACAGGAAGACATAAGAAATGGGTGTTGAGCACATAGAGAATCTAAATAAGGTCAATTGTACGTCTCAAGTCTCTGCCTGCCAAATAAAGAGGCAGTTCAGTTGGAACAATTTTAAACTTACGAGTAATTCAGAATCTGCAGCACAGCGAAACAGTACAAAAGAAACCATCACAATGCACAATAATAAGAATATAATATACCTGATTTGTCAGCTGGTTTTTGAATTTCTCTGGATTTTTCTTCCTTTCAGAATGAAATCCGTAAGAAATTTCTGCATCCATACCTGCAAAGATCATCACGTATGAAATTTTGAATTTCTGAGTCATTGAATCAATATATGCTCTAGGTTCTTGAAGAAACTTGGGATCTTTTTTCCAAATATAATAAACTACGACAGTAGTGATCATGAGTCCCACAGTACTTGCCGTACATGGAACCAGCAGGTGCCTGCATCTTCATAGCACAAACTAGCATGCAACATCAAGTACCACGGTAAACTAGAAACCAAACCATCAGACTGTTTAGGGTCCATAACTGGAAGTGGCCATGAACAGACAAAGCCTTACCCATACTAAAGTAATTCCAAAATCCTCCACGGAATGTGTGGTAACCTTCCTGAAGGGGAAAAAAAAAGACCAATTGAGGAAATGAATTAAATTCAATGCCACTTGGGTCTTGACATATAACAATTTTCGTCAACAAGAAACATAGTAACTTAGAAAAACTAGACAGATTGTCTTACCATATTGAGGGAATCACTACTTGACACACGGTGAAATGCATGTAATGAATGAGGCAACTCTAAGGGGGCGATTGGATCACATGGACCTTCCTTTGTAGCTCGCATCCTCAACATGATATGCCAGCTGAAACATTCATGTGCACATTACATTGTAGTCTTCTGTTGTGTTTGAATGAGGTATAAAAGGGAAATCATGTTTTAGACTGGGAGGAAGGACAAACAGATTTGAAGAGGTAATTATTCAACTACTTAAGGTTCATTAAAAGAGTTCAGTATTGATTGATTGCAAGTTTGGGGGTTTATGGCAAATATTAAATAAGTTAATCAGCCGCTTAACCCTTATGAGCAGGATCAAGGCAAAAGTCAAAGCTTGAAGTAAAGTGATATCTTTATGGCATTACCTATCAATTTTCATCTCTTTTGCATGCCTCACTAGCCCAAGGAATGATTTTACTGACTCTTGGTCAGTACAAGGATTCTTCTTTCCCTGCGATGTTTAATTCAGCAAAAGTATACAAGACCATGATCAGGAACAGGTTAAAGTTCAGGCAAGAATCATTTAAAAGATCATTTAACACAGAACAACTTATACATAATGGACTCTAGTTTAAGTACATCACTTTTGCCACCTCCCTTCAAAAACTAATTGACACAAGAAGATGATTTGTTAAGTACACATTAATTTCTGACCACTTACCCATCCAAATGAAAATGGAAGGTTGTTTCCGGTTCCCAGAGGCACAGTAGCAATTGGAGGAGGGTGTGAAAGCTTGAGATCACTGACTACCCCAAGCAGCCAGCTTGCCGTACCATCGCCACCTGCAACCTAATTGAAACCTCTTTTAAGTCAACAGAAATGGAAATGGAAAGCCAAAGAGACTTCCTACTCTGCAAATCTGCATAATATAACCTCAAAGCATCATCACTCACAATTATTCTGAGAGTTCTCCAAATTTGAACAGCAAGAATGTCTCCCTCCATCTTGAGCTTCTCAAGGTTGACATTCAAACGGTGCAACACTTTATCCGGAGCCTCTTCGGAGACATCGAAAACCTGAAAAGAACACAGCAGCCATCAACAACTGATATAACAAAAGCCACATTCCTTTCCTGACGCCACAAGGAAAGAAAGGAAATCACATTTCCAAACACGCAGACGATATACCTGCGCTTCACCGAGAAGTTCACGGTAGGTTTTGATCAGGCTGCTCCCGAGCTGACCACCAGATCCAGAATTGATGAACACCAGCACGGGGCACGGGGGCGCATGATCAAGAAGCACCCGCTGCGCATCCGGCCTCAGGATGTAATCCGGAATGCGGTAATCCGTCAGCGGCCCGCATGGCTTGGATGATGAACCCACCACAGTATCCATCTCCCCTTCCATCCTGCTCCTGCAAATCGATTCAATTCCCCTAAAAAGAACACCACAACAAATGCCACCACCACAAATTCAATTCCTTCTCCTGAGATGATTCAGGCCAAGAAACAGTCGAATCCAACACACCAAACCCACAAACACCCGTGTCGATTTGTCTCGCAACACATCATAAATCGCAGGAGGCCATGGATGAAAGGGAAAAATTCGAACTTATCATCCACAAGAGAAGATAAAAAAAGAAACCGCCTTTGGATCGTTACCCAGGACTGGAAAAGGAACTACCTTTCTCGGCCGGTGGCGCGGGCGCCAGTGTCAGATCGCCGGCGGCGGCGGAGGGAGGCCGCTGTCGCCGGGAAATGGGTGGCTCGCGAGCGGAGGCGGAGGCGGGAGGCCGCGCGGGGATGAGGGAAGAAGAAGAGAGAGAAGGAGAAGTGTTCGCT
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| CDS seq | ATGGAAGGGGAGATGGATACTGTGGTGGGTTCATCATCCAAGCCATGCGGGCCGCTGACGGATTACCGCATTCCGGATTACATCCTGAGGCCGGATGCGCAGCGGGTTTTCGATGTCTCCGAAGAGGCTCCGGATAAAGTGTTGCACCGTTTGAATGTCAACCTTGAGAAGCTCAAGATGGAGGGAGACATTCTTGCTGTTCAAATTTGGAGAACTCTCAGAATAATTGTTGCAGGTGGCGATGGTACGGCAAGCTGGCTGCTTGGGGTAGTCAGTGATCTCAAGCTTTCACACCCTCCTCCAATTGCTACTGTGCCTCTGGGAACCGGAAACAACCTTCCATTTTCATTTGGATGGGGAAAGAAGAATCCTTGTACTGACCAAGAGTCAGTAAAATCATTCCTTGGGCTAGTGAGGCATGCAAAAGAGATGAAAATTGATAGCTGGCATATCATGTTGAGGATGCGAGCTACAAAGGAAGGTCCATGTGATCCAATCGCCCCCTTAGAGTTGCCTCATTCATTACATGCATTTCACCGTGTGTCAAGTAGTGATTCCCTCAATATGGAAGGTTACCACACATTCCGTGGAGGATTTTGGAATTACTTTAGTATGGGTATGGATGCAGAAATTTCTTACGGATTTCATTCTGAAAGGAAGAAAAATCCAGAGAAATTCAAAAACCAGCTGACAAATCAGGGTACATATGCTAAGGTTGGACTTAAACAAGGATGGTTTTGTGCTTCTTTAAGTCATCCATCTTCAAGGAATATTGCTCAACTTGCAAGTGTGAAAATCATGAAAAGAGCCGGTAGCCACTGGCAAGAACTTAACATTCACCACAGCATTCGATCAATCGTCTGTCTCAACCTGCCTAGTTTCTCTGGAGGTCTGAATCCTTGGGGCACACCTGGCACAAGGAAAGTAGAAGAGAGGGAGCTGACGGCACCTTTTGTCGATGATAGACTTATTGAGGTTGTTGGATTCCGTGATGCCTGGCACGGACTTGTCTTGCTGGCCCCAAATGGACATGGTACCCGCCTTGCGCAGGCCCAAAGGATCCGTTTCGAGTTCCACAAAGGCGCAGCAGAGCACACCTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCCCTCCCAAAAGATGACGACACTGTTGTTGTGGAGATCTCCCACCTTGGTCAGGTCACCATGCTTGCCAACGAGCCCTGCAAGTCGAAGAGCGTCCATGACGACCAATCCTCCCACGCGCAACACAGCGGCCATGGCAACAACGACGACGACAAGGACAGCATGGAGGACGAAGATGAGTGGGAGGATGGCAGGAGGAAGTTTGGTGCCGCAGATACGTTCAAGATCCCTGACGAGGTTGACATTGCTCACCTCAGCTGA
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| Protein seq | MEGEMDTVVGSSSKPCGPLTDYRIPDYILRPDAQRVFDVSEEAPDKVLHRLNVNLEKLKMEGDILAVQIWRTLRIIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGKKNPCTDQESVKSFLGLVRHAKEMKIDSWHIMLRMRATKEGPCDPIAPLELPHSLHAFHRVSSSDSLNMEGYHTFRGGFWNYFSMGMDAEISYGFHSERKKNPEKFKNQLTNQGTYAKVGLKQGWFCASLSHPSSRNIAQLASVKIMKRAGSHWQELNIHHSIRSIVCLNLPSFSGGLNPWGTPGTRKVEERELTAPFVDDRLIEVVGFRDAWHGLVLLAPNGHGTRLAQAQRIRFEFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLGQVTMLANEPCKSKSVHDDQSSHAQHSGHGNNDDDKDSMEDEDEWEDGRRKFGAADTFKIPDEVDIAHLS |
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| Function | Diacylglycerol kinase 5 [UniProtKB/Swiss-Prot:Q9C5E5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_08g0005400 | OsARC_08g0005400.01 | Chr08 | 4641206 | 4646167 | - | NAM | ||
| CDS seq | ATGGAAGGGGAGATGGATACTGTGGTGGGTTCATCATCCAAGCCATGCGGGCCGCTGACGGATTACCGCATTCCGGATTACATCCTGAGGCCGGATGCGCAGCGGGTTTTCGATGTCTCCGAAGAGGCTCCGGATAAAGTGTTGCACCGTTTGAATGTCAACCTTGAGAAGCTCAAGATGGAGGGAGACATTCTTGCTGTTCAAATTTGGAGAACTCTCAGAATAATTGTTGCAGGTGGCGATGGTACGGCAAGCTGGCTGCTTGGGGTAGTCAGTGATCTCAAGCTTTCACACCCTCCTCCAATTGCTACTGTGCCTCTGGGAACCGGAAACAACCTTCCATTTTCATTTGGATGGGGAAAGAAGAATCCTTGTACTGACCAAGAGTCAGTAAAATCATTCCTTGGGCTAGTGAGGCATGCAAAAGAGATGAAAATTGATAGCTGGCATATCATGTTGAGGATGCGAGCTACAAAGGAAGGTCCATGTGATCCAATCGCCCCCTTAGAGTTGCCTCATTCATTACATGCATTTCACCGTGTGTCAAGTAGTGATTCCCTCAATATGGAAGGTTACCACACATTCCGTGGAGGATTTTGGAATTACTTTAGTATGGGTATGGATGCAGAAATTTCTTACGGATTTCATTCTGAAAGGAAGAAAAATCCAGAGAAATTCAAAAACCAGCTGACAAATCAGGGTACATATGCTAAGGTTGGACTTAAACAAGGATGGTTTTGTGCTTCTTTAAGTCATCCATCTTCAAGGAATATTGCTCAACTTGCAAGTGTGAAAATCATGAAAAGAGCCGGTAGCCACTGGCAAGAACTTAACATTCACCACAGCATTCGATCAATCGTCTGTCTCAACCTGCCTAGTTTCTCTGGAGGTCTGAATCCTTGGGGCACACCTGGCACAAGGAAAGTAGAAGAGAGGGAGCTGACGGCACCTTTTGTCGATGATAGACTTATTGAGGTTGTTGGATTCCGTGATGCCTGGCACGGACTTGTCTTGCTGGCCCCAAATGGACATGGTACCCGCCTTGCGCAGGCCCAAAGGATCCGTTTCGAGTTCCACAAAGGCGCAGCAGAGCACACCTTCATGAGGATCGATGGGGAGCCATGGAAGCAGCCCCTCCCAAAAGATGACGACACTGTTGTTGTGGAGATCTCCCACCTTGGTCAGGTCACCATGCTTGCCAACGAGCCCTGCAAGTCGAAGAGCGTCCATGACGACCAATCCTCCCACGCGCAACACAGCGGCCATGGCAACAACGACGACGACAAGGACAGCATGGAGGACGAAGATGAGTGGGAGGATGGCAGGAGGAAGTTTGGTGCCGCAGATACGTTCAAGATCCCTGACGAGGTTGACATTGCTCACCTCAGCTGA
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| Protein seq | MEGEMDTVVGSSSKPCGPLTDYRIPDYILRPDAQRVFDVSEEAPDKVLHRLNVNLEKLKMEGDILAVQIWRTLRIIVAGGDGTASWLLGVVSDLKLSHPPPIATVPLGTGNNLPFSFGWGKKNPCTDQESVKSFLGLVRHAKEMKIDSWHIMLRMRATKEGPCDPIAPLELPHSLHAFHRVSSSDSLNMEGYHTFRGGFWNYFSMGMDAEISYGFHSERKKNPEKFKNQLTNQGTYAKVGLKQGWFCASLSHPSSRNIAQLASVKIMKRAGSHWQELNIHHSIRSIVCLNLPSFSGGLNPWGTPGTRKVEERELTAPFVDDRLIEVVGFRDAWHGLVLLAPNGHGTRLAQAQRIRFEFHKGAAEHTFMRIDGEPWKQPLPKDDDTVVVEISHLGQVTMLANEPCKSKSVHDDQSSHAQHSGHGNNDDDKDSMEDEDEWEDGRRKFGAADTFKIPDEVDIAHLS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_08g0005400 | OsARC_08g0005400.02 | Chr08 | 4641188 | 4646167 | - | IsoSeq | ||
| CDS seq | ATGGGGAGCCATGGAAGCAGCCCCTCCCAAAAGATGACGACACTGTTGTTGTGGAGATCTCCCACCTTGGTCAGGTCACCATGCTTGCCAACGAGCCCTGCAAGTCGAAGAGCGTCCATGACGACCAATCCTCCCACGCGCAACACAGCGGCCATGGCAACAACGACGACGACAAGGACAGCATGGAGGACGAAGATGAGTGGGAGGATGGCAGGAGGAAGTTTGGTGCCGCAGATACGTTCAAGATCCCTGACGAGGTTGACATTGCTCACCTCAGCTGAACTCAGAATTGGTATCTTTTCTAGGTTGCAT
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| Protein seq | MGSHGSSPSQKMTTLLLWRSPTLVRSPCLPTSPASRRASMTTNPPTRNTAAMATTTTTRTAWRTKMSGRMAGGSLVPQIRSRSLTRLTLLTSAELRIGIFSRLH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr08 | 4645740 | 4646010 | - | OsARC_08g0005400.02 | OsARC_08g0005400.02,OsARC_08g0005400.01 | All |
| A5 | Chr08 | 4645400 | 4645629 | - | OsARC_08g0005400.02 | OsARC_08g0005400.02,OsARC_08g0005400.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.072058 | 0.788078 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0178700 | RBH | 1.253360 | 0.597315 | 5.821671 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g08110 | RBH | 0.841511 | 0.398864 | 1.487869 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0178700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0005360 | RBH | 0.389925 | 21.120594 | 7.344782 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0005380 | RBH | 0.255842 | 3.884160 | 4.628669 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0005420 | RBH | 1.500708 | 11.415051 | 10.191892 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0028140 | RBH | 0.000000 | 0.183126 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0005100 | RBH | 9.373198 | 2.036927 | 26.361437 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0068500 | RBH | 5.9719975 | 9.473691 | 6.473256 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0004940 | RBH | 0.293899 | 0.776294 | 2.259831 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0074500 | RBH | 18.4508725 | 13.289641 | 8.346256 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0005060 | RBH | 0.374744 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0005130 | RBH | 0.751727 | 11.905612 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0004920 | RBH | 4.062380 | 22.610651 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0005200 | RBH | 0.518929 | 2.824915 | 2.412849 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0005110 | RBH | 0.364777 | 16.490456 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G005050 | RBH | 0.276220 | 3.386670 | 3.263248 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0005020 | RBH | 0.470076 | 4.427927 | 10.948634 |
