Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_07g0021400 | OGI:07066880 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr07:23925031-23925920 | ||||||||
| Gene Symbol | DLN193, OsDLN193, DLN194, OsDLN194 | ||||||||||
| DNA seq | gcaatcgcatgcaaacgtatcgccttcaattttcacgacacgagctgtgtgtgttggatagcgtgacgtgatggagcaaggcggcggcgccgccgacggcggcgacctcatctccctgtgcctcatggcgctcgccgccgcggcgcgcggggagagcaccgcgctggcgctggcgctggcgccgccgccgccggagctccacttccggtgctcgctctgcggcaaggcgttcgcgtcgtaccaggcgctcggcggacacaaggcgagccaccgcaagccatcggcggcggcggcggcgccgcccgcgcacagagacgtcgtcgttgctgctgctccggcatcatcaggccgcgtcgccgccgacgccgacgccgcctcggaggcggacgggcggcggcggcggcacgtctgctcgctgtgccggcgaggattcgccaccgggcaggcgctgggcgggcacaagaggttccactacttgcatggcccatcggtgtcggcgacggtctccagtgcagcgacggcggcgagcgtgggcgccgctttcgacctaaacgtggcgcccatcaaggagatcgccggcgagcaacgacggtgcggcgaggaggccgacgacgacgatgaggcggagagcccttcaccggccaagaagccacgacgccggccaggatgagatcctccacgttagtatatatgaagtactaaccatccaattatatacatatagctcgttgagcatgtatgtatacaaccggtagagaaagcagaggctgctcacgtcgtcacgcgtgtgctccgatcgataactttagggtgtgcaattgtaaataaaaaaagggagattcggagggaaagacgtcctccagacagagattaaacacgggctcgatgtt
More
|
||||||||||
| CDS seq | atggagcaaggcggcggcgccgccgacggcggcgacctcatctccctgtgcctcatggcgctcgccgccgcggcgcgcggggagagcaccgcgctggcgctggcgctggcgccgccgccgccggagctccacttccggtgctcgctctgcggcaaggcgttcgcgtcgtaccaggcgctcggcggacacaaggcgagccaccgcaagccatcggcggcggcggcggcgccgcccgcgcacagagacgtcgtcgttgctgctgctccggcatcatcaggccgcgtcgccgccgacgccgacgccgcctcggaggcggacgggcggcggcggcggcacgtctgctcgctgtgccggcgaggattcgccaccgggcaggcgctgggcgggcacaagaggttccactacttgcatggcccatcggtgtcggcgacggtctccagtgcagcgacggcggcgagcgtgggcgccgctttcgacctaaacgtggcgcccatcaaggagatcgccggcgagcaacgacggtgcggcgaggaggccgacgacgacgatgaggcggagagcccttcaccggccaagaagccacgacgccggccaggatga
More
|
||||||||||
| Protein seq | MEQGGGAADGGDLISLCLMALAAAARGESTALALALAPPPPELHFRCSLCGKAFASYQALGGHKASHRKPSAAAAAPPAHRDVVVAAAPASSGRVAADADAASEADGRRRRHVCSLCRRGFATGQALGGHKRFHYLHGPSVSATVSSAATAASVGAAFDLNVAPIKEIAGEQRRCGEEADDDDEAESPSPAKKPRRRPG |
||||||||||
| Function | Zinc finger protein 36 [UniProtKB/Swiss-Prot:Q75KE5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_07g0021400 | OsARC_07g0021400.01 | Chr07 | 23925031 | 23925920 | + | NAM | ||
| CDS seq | atggagcaaggcggcggcgccgccgacggcggcgacctcatctccctgtgcctcatggcgctcgccgccgcggcgcgcggggagagcaccgcgctggcgctggcgctggcgccgccgccgccggagctccacttccggtgctcgctctgcggcaaggcgttcgcgtcgtaccaggcgctcggcggacacaaggcgagccaccgcaagccatcggcggcggcggcggcgccgcccgcgcacagagacgtcgtcgttgctgctgctccggcatcatcaggccgcgtcgccgccgacgccgacgccgcctcggaggcggacgggcggcggcggcggcacgtctgctcgctgtgccggcgaggattcgccaccgggcaggcgctgggcgggcacaagaggttccactacttgcatggcccatcggtgtcggcgacggtctccagtgcagcgacggcggcgagcgtgggcgccgctttcgacctaaacgtggcgcccatcaaggagatcgccggcgagcaacgacggtgcggcgaggaggccgacgacgacgatgaggcggagagcccttcaccggccaagaagccacgacgccggccaggatga
More
|
|||||||
| Protein seq | MEQGGGAADGGDLISLCLMALAAAARGESTALALALAPPPPELHFRCSLCGKAFASYQALGGHKASHRKPSAAAAAPPAHRDVVVAAAPASSGRVAADADAASEADGRRRRHVCSLCRRGFATGQALGGHKRFHYLHGPSVSATVSSAATAASVGAAFDLNVAPIKEIAGEQRRCGEEADDDDEAESPSPAKKPRRRPG |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0590100 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g40080 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0590100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0021620 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0021640 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0021550 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0022740 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0021490 | RBH | 0.000000 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0393200 | RBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0021920 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0406300 | RBH | 0 | 0.1258565 | 0.0121285 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0021230 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0021390 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0021290 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0021540 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0021260 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G021160 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0021230 | RBH | 0.0 | 0.0 | 0.0 |
