Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_06g0024320 | OGI:06075560 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr06:27676048-27678272 | ||||||||
| Gene Symbol | RLCK210, OsRLCK210 | ||||||||||
| DNA seq | atggggtcggcggcgagctcctgctgcggtggatcgaagaaggtggaacaagggtatatatggacagaatggcacagaatttggttgtaaatgagatgattttgtagtggcattttgggttgattttgtgaatgaattaggtgcgtgagcgcgtcgatgagcagcaatacgtggaggatattcagctacaaggagctgcacgcggcgacgaacgggttcagcgaggagaacaagctcggcgagggcggcttcggcagcgtctactggggcaagacctccgacggcctccaggttattacacttgatagccaatcggggaaaactattttttgatccctcgagatgagcatgtccctcgtttctttgaagaatatccaaacggttataaaaacttcttaaacattcgacaatactcatacaacacacatatatattattctacaaaattttaggtccaaactcaactgacacatttgtgatatgaaaaaataaataaattgggcttatgaatagtaacactttttttttatttttttaatatgcataagtcgaatttgaacttggttttaagtcgaatttgaacttggttttcggtgtactgataggtgtcaatatactctgcattatcaaatttttcaaaaaatattttatcactatttacattggatttgtaagaaaaaaaaaggtgaacgagggatatctctcgagagattagaatcaattcccgctaatcagtcccgctaatcagtgacagcttgatgagcttcaccgccgagttgtttttctaatggcgatcgggttttttttttgtgtgtgtgtgttgcagatcgcggtgaagaagctgaaggcgacgaacacctccaaggcggagatggagttcgcggtggaggtggaggtgctcgccagggtgcgccacaagaacctccttggcctccgcggctactgcgccggcggcgccgccggcgaccagcggatgatcgtctacgactacatgccgaacctcagcctcctctcccacctccacggccagttcgctgccgacgtccggctcgactgggcgcgccgcatggccgtcgccgtcggcgccgccgagggcctcgtccacctccaccacgaggcgaccccccacatcatccaccgcgacatcaaggccagcaacgtcctcctcgactccggcttcgcgccgctcgtcgccgacttcgggttcgccaagctggtgccggagggggtgtcgcacatgaccaccaggcaaggttttaaatctcccgctaaactgccgctatcttctgctacagctatttgagaagggtctagctatttgctttcatgtacttccttcttctctcaatgtttgacatcgttggttttcttaaacatgtttgaccgtccgtcttattcaaaaacttttatgaaatatgtaaaactatatgtatatataaaagtatatttaacaataaatcaaatgatagaaaaagaattaataattacttaaattttttgaataagacgaacggtcaaacattttttaaaaagtcaacagcatcaaatattttggaatagagggagtacaatttagccgctatagaggctaaatgtcttagcctactatttgaaacattgccatcagggtgaagggcaccctggggtacctcgcgccggagtacgccatgtgggggaaggtctccggcgcctgcgacgtctacagcttcggcatcctcctcctcgagctcgtctccggcaggaagcccatcgagcgcctcccctcgggggccaagcgcaccgtcaccgagtgggcggagccgctcatcgcccgcggccgcctcgcggacctcgtcgacccgcgcctccgcggcgcgttcgacgccgcgcagctcgcccgcgccgtcgaggccgccgcgctctgcgtccaggccgagcccgagcgccgccccgacatgcgcgccgtcgtccgcatcctccgcggcgacgccgacgccaagccggtgaggatgaagagcatcaagtacgcggatcacctcatggagatggacaagagcagcgtgtactacggcgaggacggcggcggcgacggcgaggaagacatggacgacgaggaggtggaggagtactcgctgatggaggacaagagcagcgtgaacttcggggtgttcggcgccatgccggtgcagaccatgcacgatccctacgtcaggaggtttggaggaggagatggtatcaagatctga
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| CDS seq | atggggtcggcggcgagctcctgctgcggtggatcgaagaaggtggaacaagggtgcgtgagcgcgtcgatgagcagcaatacgtggaggatattcagctacaaggagctgcacgcggcgacgaacgggttcagcgaggagaacaagctcggcgagggcggcttcggcagcatcgcggtgaagaagctgaaggcgacgaacacctccaaggcggagatggagttcgcggtggaggtggaggtgctcgccagggtgcgccacaagaacctccttggcctccgcggctactgcgccggcggcgccgccggcgaccagcggatgatcgtctacgactacatgccgaacctcagcctcctctcccacctccacggccagttcgctgccgacgtccggctcgactgggcgcgccgcatggccgtctccggcgcctgcgacgtctacagcttcggcatcctcctcctcgagctcgtctccggcaggaagcccatcgagcgcctcccctcgggggccaagcgcaccgtcaccgagtgggcggagccgctcatcgcccgcggccgcctcgcggacctcgtcgacccgcgcctccgcggcgcgttcgacgccgcgcagctcgcccgcgccgtcgaggccgccgcgctctgcgtccaggccgagcccgagcgccgccccgacatgcgcgccgtcgtccgcatcctccgcggcgacgccgacgccaagccggtgaggatgaagagcatcaagtacgcggatcacctcatggagatggacaagagcagcgtgtactacggcgaggacggcggcggcgacggcgaggaagacatggacgacgaggaggtggaggagtactcgctgatggaggacaagagcagcgtgaacttcggggtgttcggcgccatgccggtgcagaccatgcacgatccctacgtcaggaggtttggaggaggagatggtatcaagatctga
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| Protein seq | MGSAASSCCGGSKKVEQGCVSASMSSNTWRIFSYKELHAATNGFSEENKLGEGGFGSIAVKKLKATNTSKAEMEFAVEVEVLARVRHKNLLGLRGYCAGGAAGDQRMIVYDYMPNLSLLSHLHGQFAADVRLDWARRMAVSGACDVYSFGILLLELVSGRKPIERLPSGAKRTVTEWAEPLIARGRLADLVDPRLRGAFDAAQLARAVEAAALCVQAEPERRPDMRAVVRILRGDADAKPVRMKSIKYADHLMEMDKSSVYYGEDGGGDGEEDMDDEEVEEYSLMEDKSSVNFGVFGAMPVQTMHDPYVRRFGGGDGIKI |
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| Function | PTI1-like tyrosine-protein kinase At3g15890 [UniProtKB/Swiss-Prot:Q9LSC2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_06g0024320 | OsARC_06g0024320.01 | Chr06 | 27676048 | 27678272 | + | NAM | ||
| CDS seq | atggggtcggcggcgagctcctgctgcggtggatcgaagaaggtggaacaagggtgcgtgagcgcgtcgatgagcagcaatacgtggaggatattcagctacaaggagctgcacgcggcgacgaacgggttcagcgaggagaacaagctcggcgagggcggcttcggcagcatcgcggtgaagaagctgaaggcgacgaacacctccaaggcggagatggagttcgcggtggaggtggaggtgctcgccagggtgcgccacaagaacctccttggcctccgcggctactgcgccggcggcgccgccggcgaccagcggatgatcgtctacgactacatgccgaacctcagcctcctctcccacctccacggccagttcgctgccgacgtccggctcgactgggcgcgccgcatggccgtctccggcgcctgcgacgtctacagcttcggcatcctcctcctcgagctcgtctccggcaggaagcccatcgagcgcctcccctcgggggccaagcgcaccgtcaccgagtgggcggagccgctcatcgcccgcggccgcctcgcggacctcgtcgacccgcgcctccgcggcgcgttcgacgccgcgcagctcgcccgcgccgtcgaggccgccgcgctctgcgtccaggccgagcccgagcgccgccccgacatgcgcgccgtcgtccgcatcctccgcggcgacgccgacgccaagccggtgaggatgaagagcatcaagtacgcggatcacctcatggagatggacaagagcagcgtgtactacggcgaggacggcggcggcgacggcgaggaagacatggacgacgaggaggtggaggagtactcgctgatggaggacaagagcagcgtgaacttcggggtgttcggcgccatgccggtgcagaccatgcacgatccctacgtcaggaggtttggaggaggagatggtatcaagatctga
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| Protein seq | MGSAASSCCGGSKKVEQGCVSASMSSNTWRIFSYKELHAATNGFSEENKLGEGGFGSIAVKKLKATNTSKAEMEFAVEVEVLARVRHKNLLGLRGYCAGGAAGDQRMIVYDYMPNLSLLSHLHGQFAADVRLDWARRMAVSGACDVYSFGILLLELVSGRKPIERLPSGAKRTVTEWAEPLIARGRLADLVDPRLRGAFDAAQLARAVEAAALCVQAEPERRPDMRAVVRILRGDADAKPVRMKSIKYADHLMEMDKSSVYYGEDGGGDGEEDMDDEEVEEYSLMEDKSSVNFGVFGAMPVQTMHDPYVRRFGGGDGIKI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0654600 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g44430 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0654600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0024760 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0024560 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0024750 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0006410 | SBH | 0.043644 | 1.317579 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0024780 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0420400 | RBH | 0.011052 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0024290 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0402400 | RBH | 0.0066615 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0024710 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0024680 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0024360 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0024950 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0024590 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G024430 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0024570 | RBH | 0.0 | 0.0 | 0.0 |
