Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_06g0018190 OGI:06055620 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr06:20855974-20871590
Gene Symbol -
DNA seq

atgcccgacgactcggcgtcgtcgacgctgcagtacacgggcatcggcgcattcgtcgccatcgtcggcatcgtcgtcctggccgtcatcttctacacccgttcgtccgcccgtcacgccgcccccggcgcggcgcccgacgcggtcaccgcgctccaggggcagcagcagcagcgcggcgtcggcctcggccccgacgacgtctccgtgctcccgacgttcacgtaccacgccgccgccaccgcctcgcccggccgatgcggcctgatcggacgcggggacgcgaaggcggcggcggactgctgcgccgtctgcctcgacgagctcggcgagggcgccgtcgtgcgcatgctgccgtcgtgcaagcactacttccacgccacctgcgtcgacgtctggctgctgtcgcgggccacgtgcccggtgtgccgggggagcccagggcaggagaaggtccgcctcggcctcgcgtccctctcaccgccgctgccgcagctgcgccggtgcgcgccgtcgccgcccaaggaggccgccgccgccgccgctgccgatacgtcgagagccaacgacgatgactcctccgcagccgcgtcgaggtcgccatccccgataagatcgagcacgcgtttcgacctcgcggccgccgccattgacgccgccgcccgtagtccggcaatgtcgccgtcgccgactagcccgtggactccggagagtgtggcgcgggtgtcaaggtcaccgtctcccgtgacgacgacggcgatgaccgatttgcacgtggtcgaagtgtagagtacacggaatgatggaagcgtactaatttacgctttcgcaagaggatgtcacattattgacttttcagttattaagatgtttataaccacgaaattcatgtaagcaaatgagccgattggctcaaatgtgcattcaccaatttgacgctgatataagaggttagaaataatacaaaaattcattttttttttctactcttgtttgtttggtgttcatgctgccgaaggtgatcgtgacaacttgattctttcctatacttgactgcttatttggtacgcaagtggacatttgtcagaacagactgacttgtcatgtagcctaccctttgactttatttacaagacattttatgttttttttagaacagacattttaggttatcaacccatttcgacgatgcgctaaaaaaggcttattttcatttcagcaatattttttctctcaagcacatgctgcatcatcattaaaaaggaggaattaggacaatatggtacatgtctataaaaacgaaagaaataacaaatttgatccctcaagttcagcaaggttttgagcatgtttagaaagcttttggcagcaatagtttctcacagaatttccagctgatagaattcccccaatccgtcccaaaagaaaaatcaatatgtgtgtcaaggtttaaatctaggattggggtatttttggaacagagggagtatgtcagaacctagaaaattcagcgtttttagattcttacaagttggcttcttagaatcttctcctttagagtcttttttcgctccatattattttttatgttctaattgctgtgtttcgtattgtaaaagtgttttaggtttgttttaaatcaaacttatttagattttatcaaatttctattagaaaatgataccattttcaacccaaagcaaataattaaacatatattcaatgtattcaacagtaaatttaacgaaattaatttaatattatatatattggtatgttttttatcaacttcaaaaaacttaattaagtttaacttagaacgatattaaactccttatatatcttgaattaatggatgggccaagttccattcagagattaattataagaaaaacacaaaatcccacttcataagaagatatgcatgaggatgtttattatttgtcggtgatatggacccggggtacccatgttagggggaaggagtggaggagccctttcccctagccacctgtaagtagccgagaggcgccccacatccacctaggggcctcggggtatcccgtcgcacccctcgggcccgaagggttgcgccaccccgaggcccccgctcagctgccacgtggcggctgggcgggcggaggagggggcgccactggcacgtttacggacggcgtcccaaccacccacgcaatgcggcatggttggtcatgcgacgccgcccaagggattgacatgcgtcaatcgcttggaccagtctgtgaccggtgatagatggatgggacgggtggcagcgcacccacgccccgccctgtgtcaggcggcgtgggggcaagtatgccccgtcccatcagccattagggctcagcacgcacgtccagtgcgctcccggtatcatgagcccacaaaagtcttcaaggcttaataagggaatgacgggggttgtcccccatgtcagatgggagacggcgttgggacccacctcggagcaaacggccatgttgcttttggtctaagcatgagcgggaccagaactcgaggaagagagacccccccctccaggaagggtgagacgaatagaggcggtgcatgtggtatccccttgaattataaaaggaggaccttacccaccgagcaaagacgatgactttcgagaacttgaactctaggggaagcacagttaggttttcctaggagcccaagatttcttgtaagaactcgagcatagttccacacacacagtagtagggtattacgcttccgagcggcccgagcctatataatctctggcctcactcccgatcactttcgaccaccataaccaaatcctcagctaaggtcagctcttgatcactcgtgccttatcccctggccgaactcacaaagggggggggtctcacgtcctccaaccctcgacagtattataagaggagacattcttaaaaagaacagtgctcttctaaccacttgagacatgtgtggtggaaagaactaaagaaacacacgcgcttgttcacctcacctcgtctggcggtgcatgtacatgataagtgtgtgaatgattcatcaaaattggctcctaatccttgggcggacacggtttccttttgcaattttgttttccagcaaaattcaatatgtcttttgcagttttgtttcgctgcaaaattcggtgtttgttttttgaaacacaccaaataatccagtgcatggagtggagtggagtccgtataggttatgcacaacttatccagtttgattacacgttgtggagatcatgcaggcatcttgatcacgtatcctgttatctctatataaaccaagccatcgtctcctttcaagacagtgaaaagcaatctaggatttgcttcctcctctatgttgcattgttgctcgtagtctattccgtcctgcttgctgacatgcaccgactatcggtagagctagttttcggaaccttcgccttcgacctcctacaccgagagaaggcggcgtttttagcaagcgcttcgcacgacagctcactagtcttccataacggcttgtcttcctctatgctctagatgcgcaccaatgacaacatctgacaccgtgtgttgttcctgcggtgcgtgctactcctcgtcaacctgattcacagcacaaccacgatcctcggtacgtattcatcatgtttcgcctatttgatatgttcatgttttactatctagtttacatacttagatcgtatgatgtggttctactagtatttacaagtttaatgttatgattaatttatgaaataaactaaatttatatgttcttttatttccatcgatatatggaatgtttgcccccatttaccttcacctgagtcaaaccacacagcacaagtgaatgcatggagtggatatatggtgggtgggctagcatgatgaggtaagtcaaaccggcttttcactcttttttactactagctgatcagggagcatagttgttttctcaaagagagttcaccatcaaagttggcatacggttgccttgcaaagatggcactttagatgtgccccagggccactttgcgccaagggcaaactagcttggaggaccaagatagactaaggccttgtttagttaggcaaaatttttaggttttattattacatcggatatacggacatatatttgaagtattaaacgtagtctaataacaaaacaaattacatatttcgctaggaaactgcgagatgaatttattaagcctaattaatccgtcattagcaaatgtttactgtagcaccacattggcaaattatggcgtaattaggcttaaaagatttgtctcgcaatttacacgcaatctgcgtaattgattttttttcctacatttaatattccatgcatgtgtccaaacattcaatgtagcagcgtgaaaatttttgttttgggaactaaacaaagcctaaattaaatgtcatgaaccaggctgcgttcaaatgttaggagctttttcattgcacgtaaaaccagatgaaccattaggatataattaattaattattaattattataaacttagaaaatatatttatttaattttaaaaagatattttattttaaaaaatcgtaacgtttatcagttcaagaatatgctcactaaaaatatacaaaccatatatattgcaaaactaaaaactacaatttgataaaatccacgtcaccatatcttgtagaaaacgagtcctttaaatactttatgcttttttaaagtaaattggcatttgcttctaatatacataggagactgtcaaaaaagctcgaggctggcaagctgttcgagctcaacttgtcctaggctcgattcgagctcggctcgagctccaaacgagctgagcctgagcctctcccaaagctcgtgagctttgtcgagctgagatcgagcttctaacgagcctagctagtaatatatgatttttgttattatttaattaattaggatatcaaatatgttatttgtatatcttgtattggtattatatatttattttattctttttcctctgctattaatacgatgaacgagaaactaattatgttttaaagattatccttgaaatatgtattgttctactttaaaaacctaggcaggcgagctcgctcgatctcgactcgttgacagccctaagcacatgggtaaaatgatattcgtgccctcttcctgattaggcaaacattagataagactgctttagcctatgatagagtaataatgattgtcctgtatgtgtactactttgtccgctattctaatgcactcgtaatcttgctgtctctgcttcgttgctgccatcctatcttaagtcctatcctaggctcctagacatggttggggtagtgggccagaatatttatgcttttctggaaaattttatatggaatattgtccatatttgattattttcaacgttactcctctagtgcctaggatgttctaattgcaaatgtttttagtatttccagttctcgatgatgtcactgtcttaattgtcccaaaatatattttacaaaatgatacgtgcatctgttggttgcgaagttgacctcagccttatatttgatccctatccaggcattcaccagcatatgtcaagcaactcgcaatttcacaatgataaagtcaccaatcaaccatgactaacaaaatgcacaaaatcaccaccgaatgatttgaattcaagcatgaccagataatctaatagatgaaatttatttaaacaataccactacccagcaacccaatccaacacgaaattatcacaaaacgatgtcctaaaaaaatataataatccttctaaccaatcaaatactaatactccatggcgtggcgtctcatcatgtcatcgatagatcatccaagcccagcttagcttagcttagctagcgacccaactgaaaaaaccctatcatgcgcgaagcatgcatgcctcgatcgatctcgcacaatcgctttcgtgtgcacatataaatctcacgtcaaccaccctcttctcctcgatcgatcgaatggttggttcggtttggttttgattgatcgatattgcttttgtttaccattgccatgtccttgaaaccgggtggtgttcttggtcgccgccatgtcctcgccgccgtctgatccgagctccggtggtggcgatggcggctcggccgtgccggggacggcgagctccaacttcacgctgctgtacatcatcatcgccgtcctcgtcggcgtgatcctgtacatggcgatccggtacggccggtcggtgatgtcggagtggcgccagctgcaggccggcggcggcggcggcgagccgcgcgccgcgctgctcgggctgagctcggacgacatcgacgcgctccccacgttcacgtaccgggcgcgcggggcggcggcgtcgccgctggtcggcggcggcgggaggaggggcggcggcagcggcaaggggaagggggcgacgacggtggtggtggagtgcgtggtgtgcctgcaggagctcgccgacggcgacgtggtgcgcgtgctgccggcgtgcaggcacttcttccacggcggctgcatcgacctctggctgcgcgcccactccacgtgcccggtgtgccgcgcgcacccggagcccgacggcgtgcggctcagcgacgtcgtggccgtgtcgccgccgctgccgcagctgcgccggtgcggcctgtcgccggagcggcccacggcggcgtcgcgcgccctggcggacatcctggcacgttctccattgaggggcaacaccacctcgacgacgaccaccaccaccaccggcggaccgatcacgtcgacgtcgtcgaagtcgccgtcgtcaccggttcaagcggcgatcatcaactacgtgcaggcctcacgttcgccgtctccgacggcgtaccacagcctgaacgagcggtggccgagctcgccgacgccggttgtggttgtgcggtcgaagtcgccgtcgccgtcgtcgccaccgataggtggtctgagtctgcagacgacgacggcggcggcggcgagaggcgtcggcgtggtggaaggggtggatgcaggtgcaaccacgtcggcgtcggcgtcggcgccaacgcaggtggtggcgctgtcaagggaaggtggtggttcgcggtccaagtcgccgtcgccggtgccacattaataacgaggctgcagaagagacgccaggataaggctatagcttgacaggcaatttgattctctcttccTtttttttttttttttgtgtatgtctcttgtatagcttgtgggcttagatttgctccttgatcacattgtcttgacacgaagaatgtgtgtattttgatagaacggaaatgacaaagtcctgccaagcaggggttctcaacattaagagcccctttaaatcaaaagatttatggagaaatttcattggattaaaatcctataggaattttttcctatttggccattttattcgaaggattggacttttccaaatcctatacaattcctatgaaatgacttattgcatatgttttggaggaaatttagcaagaggtctaaccttttagaaaaatttctttgagtctatttcatttgattcatgcgtctttactacagcctaaacaaatgatcattcatatgttttttctttgttttgcaatcacctgttttacacttgcatttctatatcatgtgttttttatattcctacaattcaaaggggccctaatcagtttttgtgttttccataaaatcaccagttgtcggttttagctggtttttgtacaagttgatcaacatcgttcatttttatcacttattttaagccggtgagatgcggttttcatttgcaaaaggaaaagataaaccctacccaaaacactaagcaatcattttcagcccttgctacattgtgtccacctctctacctgctcaaactcagcccagcccaatccagctcacagtctaccaggccgggctgatgcccatagcttgggcctgcgttttcagctcgttttttctgaggcccagtccagaacctgacacaatcattagaacgtacgtattatggcaaattaaatgatcgagatgtttgtaactgtccattaattgaccaatttacaattatgcatatgtaactcaacaaatcagcgtgttttgctatttataggtacgactataccaagaccatttcagttggaattttcaggtgaaaaatcaatccaaaattttcaattttgagctttcaattctatgaaaagagacatggaaattaaaaaagaatgaatcagcgtcttcgtttcagattggcatatatggtgaacgtacaactaagcacttgaagaaactctcgaaatatctgcatctaaaacatgggcatctgcaaaaagatgcacataaaaagttgagttagagaacacagagaatagattgcagaaaatgcatgcaacttgtgctgtactctggggcaatttcgttcttaccccatgttcaatattgattttgcccctgttttttacggttttctttttacccttgtttttctgaatcgaaaccaaattttacccctgttttggatgggtatcttaacggtgttaaatctttgacaaaaagacatccttaccttacttgctatatattacacatttgacactatttttttatatgaattgtgtatttgttactatttatcagctcgcaattctgataaactttcacaagtatgacaattttgccagactgggcaaaattttgcttcaaaatttcacataattttgccaaaaaagtggacacattttgacaaaaaaaaaaagatagaatggcacaagtttcacacattcttaacacaacaagcggaagtatagcaaagcatcacaaagtcaaaaatttccaatcacaaagtgaagtaaatccaatcctacatcctcttgctcctcccatgccaagtgctcaaagtcaagcaaatcaagtcttagtgcctagtcgacactgctcgccatcgtgttcacctcccttgtgccaactcatcgtcgccttgcactgtctctgcgctctacttgttggcacgatgtcgcggtctcctgctcccccaccgccgcctccaagaccccttcccgtccccgccgctgccaagacccctccccgtcgtcgccgccaagaccctttcccattgtcgccgccaccaagatccatccttaccacggcgaagacccctccctaccacctggcagagtagccaccgcctcctccccacatcgggtcatcgtcgtggccgcttgcttcgcctgctagtgaagctgccgccaccgcctactccccactgcctcgccagggaaggaggtggctgctagttgccgccggcaagatcgccgccgccaccgccgagtcaccgccaccgcctaggtcctctagggttggagaaaattgattgggagggtaatggcgtcggagcctggctcccttcctttcttctctccctaggaggacaaaggtctaccaaaaaaatacataatcaatattccctctttttcttatttttttagctcaataattcaaggtccactaacttctgtcaaaaacaggggtagatatctacttcatttaaaaaaacaggaacaaaaacgaataccctaaaaagcagtgacaaaatcaatatttgacatcaaagcaaggataagaacgaaattgtccatagataaaaatatggatgaggctgctgacagtttgcaatgggccgtgcaggtgaaggagctttaggagcggaaaaagaaagaggtcgggaagcagcaccactgcataatttcacccaacgagataattacacacatgcaaataactttttaataggaattagcaagatcagagaaatacacggttgattttcatctctttgaacgtgtattagcagacacatttgtgaatgcgtgagttggaagttttgtgtgttcgggacgcattcacgagcgtgcgagcatagtggtgcacaaacataatacgtgtgcgtttgctacgtgataaaataataggaggaggtcaagataaataaaccttcaaatcctatagtaaagatgcacgttcagtcacagagtcactcatcggcaaaatatgcgaataagagtatcaactaacaaaatcacctccatttcggacaaaccaataaaaatatatcttaaggttttctttcggttttacattgaaggtaaaaaataaccgacttcatagttccgtagaaaatgagcttctaacaaagtacaagggctaaaattggattttacctttttctagtggagtctattttggcaagtgtgcatacaaatgtgcactgtgtaatgtccttttcattatccacatgtgtgcattgtataatgtcttgagttaggtcttgcgctgccatacatgcatcatgacagtgcggtaagtgaaacaaatgagtgagtgaggtaggtttccagcatgcaactagaccggctaatattttaacagctcacacaatggttcgttcttttggttacagtcttacagaattcaactgtacataatacccaagctggtgacactactatacgattgatttttctggacgcctcccctttttatttccgtgcggtttgtaagtggaaccgcacagaaaaattgagaaccagtgctggggtgtcgcccgcacgggaaaattggcgctgtagtagtgagatgaccgaaagaattccaaggccatctttgctcgatctgtgcttgctgatatgttttggataacggaactgatgaactcccaacctttgtaccaatcatggtctcatggatgcaaacactgtccttataactaaatgctaagcatttcatattgttttacggactcatcttttcgctatatttattagctaaaatttaaattttcagccttaaattatttaaggttgattttaggttttttcatcgaagtttatttttcagcctttgtttttaggtcgttaagaacacgtgtataaaaattttattcacaaattatttttcgtttgcaaatgtgccgtacgatgaggcccttagtgatgtaagcttcaaatcgaaatgaggatttacggttcggttactgatggggcccttatggtatcatgttttgctaagtcgacaatactaggctagctgtccaacagagccgctttacattgctgtctgacatttttcatacaacagggtctattaattatggattgcacaattgagcaattgcaggaactgatcttgaagaaaaatcctgtggataaaacattggaatctacaaaagttttgtgcggaaaattaaataaagactaaggtggttactccctccatccccatatataaaaataatatatgttgtaggagaaaaaattagtgatagagaaaaaagttataatcttctttatcaatgtaaagagtaacggtggttgttataagatttgaacaaatttaaatggatgcgattaataagacaattagtactctctaatccatcctatagggataattttcttttattaaattgtataaaactctactattatgatctaaatagcacaaaaccacggagattttggcatgtggaacataactcagggattatggttttaaaatttctcaaaaccctaccattgactattttgacatactcctaatcaaaagataaaatttgctacaggaaatttaaaatttatgtaatttgctggtaggcatcgttaaaatatgtcatgactgaaagacactttaaaaaactggtagtttgctggaagatttttttcagttcaattagagagagaaattcttcaaaaagacaagaatcccctagggtcaaaaacttttgagctgagaatagagtgaaggtgaaatatgatttatgctagtgatttacttatgttgattgtaaatttacagttgcataatttctaaacttttactctaatgccatgtctgaagcatgtggtcctaaggtcattctcgtatttcttaagaatttatttcttcaattgagtcgagagtatcctctagcaaattatcagttgtttagagtgtcttttagctgtaacacattttttcgatgtctatctgcaaattgcacaaattttgagtatcctataacaaaatttgccatatcaaaatgatcaatggtgtagttttgtgaaaattttatgaccaaaatatctaggcttatgtgccatatgcctaaatctatgtggtttttggttttgtacaacttaaactataataggtgtggttttataaaaaataccctctttgtacaacttaatcctgatttttggttcaggatttataaattatttaataaattattcttagaattatattaaatgttcattaatttacaagtgaagtaaaatgcgggaaataaaattttctaaatatatggctggatttaccatgcttctcaaatcaataaactgcatgttttattaaaaataaatctgtatagaagttttttcagaaaaatgaaaaaatatttttcaaatttatgatagttaatacttattaaccatgagctaataatccgctccattttttgagccgtgaatagccacaaccaaatactgagccgaactgagtctaaactatttcgtcacgcgtagaaatgatcattataaacaaacacacacatttagacacttggtagccattgccattcttttttttttacaaaccagcatttagaccatgaatagtttcattaaatatagtaaaagaaataagactataacatataaggtttatatataatatgagtggtgtagggttgccttgccttacatatgagtagtgatcacctctgcgctcctgtcgtcctcaccgccatctgtgcgcccatacaactacacaagcacccactacccctcttctctgccacgctcgctggcctattcttttcgccaccgctatcgcctcacatcacggagacatggtcacatatagatgaaggggaagaaaaaaaaagacgaaaggagccgcaatgtcattttcccctcaatttattgagttggcggttaaaatgtgataaaacttaaaaaaaatcaggtagtcattttccccttaatttgttggagtatgctattcaagaggataataagtaaaaaaaaaactatctctatgcgaatgaaggagttgttcagctgcctacggtgttgtttcgcagcctctaacaattttaacttatgtagcaagtaataaatagtaaccggctacgtggttgtgccgttaattgtagcagaacagccaaaaaaaaaactttattttgaaccacctattgaatgtatgaattattacgatttatacgaaaatcatgtaaaagcttttcggatccaagaaacaatttacaaggttacgaacaaacaaaactaaactatataaacacactataaaattcctgtgttctagtaataaacagcctgtgctgcgtgatcccacaacacaaaaggccacggtgacaaaaatatcgcgaatcgcctgatattttgagcgtacgaggagtgtgggcgtgcgtccctgccaagtctatccaactgaaacaagcgagcgagaaaggcaagtaggtccaccaaccagcagccgagtcccatcgatggcgacgcctcccaatcccaacgagataaacacgccgcgcgccccgccgccaccatccgcatccaccattccattcaccattccacccctcgcccgcggattcttggaacgctttgctgctgctcgcgcatggtggattggtggggctagtgctagcgatcgcgaggaggaggaggacggcaagattggcggccatgctgagggcggtgcggcctgcgccgtcggcggcggcggggcccgccgcaccgccgggcgacggcgaggcgcgcgcctgctacggcatcgtggtggcgtgcgtgtcgttgctgctgctgtgcgcgctcgtctccgccgtcggcgtcgccagggccttcgccgccaccggggtgctcgttctgctgctcggcctcgccggctggctcgcgcccacggacgccttcgccgtcgcgctggcccccgagctctacgcggggaacgccggcggcggcggcggtagcgcccgcgcggcgccggcggtgcggctgcaggtgcgccggtgcgcgtcgtgcgggctcgccgcccaggccatcgacgcgctgcccgcgttcgcgtacgagccccccgccgccgacgtcgaggacggcggcgagggcaagccgcgcggcggcggcgcgctgtgcgcggtgtgcctggaggacgtcgtggccggcgagacggtgcggcggctgccgtcgtgcgggcacctcttccacgtggactgcatcgacatgtggctgcacgcgcaccggacttgcccgctctgccgccgcgacctctcgccggagaaggtcaccgcgaaatcctccgccgccgccgtcgccgccgcgacggtctcctccaccgacgtgctgccgccggtgtgaaacgctaattcaccttgcttggtgttcactactaacatcacctagtgttgttattactgcgtcactgtacattacttccgaatgttctactacttggtatactaactaattagcatttccaaaccagaaaagtgtgccctgtaaccgtgttctgtaacccattattttcgggatcaacaggacataataatcaaccaagattccataagattgtgaccaaaccggctatttggaatttagccggcataggacaatacagaaatctctacaaactctcaaattaatatactctactaactttgtgattgatgcaaacgcaaccgatttggacaggtgtacgtacttaaaatggtacggtaacagcaacggacgtgcttgacacgtctggaactcgtcgcccacgtcgagagcgtgacgctgctggtgtaatccgccagctatgttcatgcagatcgtgtgctagctactcatttcctagtgtttcttgtattcggcgtcgtcgctgcatttcgaaaatttcgtagcatttcgtaggaatttggcacgaaataaatcagttcaaatcatcggagaaatcgctggtcgggatgcccgaggcggcggcggcggaggaggaaggcggtgatggctgctcgacgaggctagggtgctacggcttcatggcggtgaacgtcctgatggggctgtactgctccatcgcctacgccgtgagcgccaccgtggcgggcgccgtcgccgtcgcggtcgcgctcctcctgctggcgctcgccggcaggctggcgcagacgacgggaggaggctccgccgcggcggaagcgtcggggcggcggcggcggctgctgagctgcccgtgcgcgtgcgggctgatggcgcccggcgcgggggggatcggcgtgctgccggcgttcgcgtacgagcccggcggcggcggcggcggcgtgctgtgcgcggtgtgcctggaggacttgcgcggcggcgagatggtgcggcggctgccggcgtgcgggcacctgttccacgaggactgcgtcgacgtgtggctgcgcgtccgccggacttgcccgctctgccgccgcgtgctcccgccgcgcaagtccgtggcggccgcggcggcggcgtcggccgctgtgctgccgcctgtctga

More
CDS seq

atgcccgacgactcggcgtcgtcgacgctgcagtacacgggcatcggcgcattcgtcgccatcgtcggcatcgtcgtcctggccgtcatcttctacacccgttcgtccgcccgtcacgccgcccccggcgcggcgcccgacgcggtcaccgcgctccaggggcagcagcagcagcgcggcgtcggcctcggccccgacgacgtctccgtgctcccgacgttcacgtaccacgccgccgccaccgcctcgcccggccgatgcggcctgatcggacgcggggacgcgaaggcggcggcggactgctgcgccgtctgcctcgacgagctcggcgagggcgccgtcgtgcgcatgctgccgtcgtgcaagcactacttccacgccacctgcgtcgacgtctggctgctgtcgcgggccacgtgcccggtgtgccgggggagcccagggcaggagaaggtccgcctcggcctcgcgtccctctcaccgccgctgccgcagctgcgccggtgcgcgccgtcgccgcccaaggaggccgccgccgccgccgctgccgatacgtcgagagccaacgacgatgactcctccgcagccgcgtcgaggtcgccatccccgataagatcgagcacgcgtttcgacctcgcggccgccgccattgacgccgccgcccgtagtccggcaatgtcgccgtcgccgactagcccgtggactccggagagtgtggcgcgggtgtcaaggtcaccgtctcccgtgacgacgacggcgatgaccgatttgcacgtggtcgaagtctccggtggtggcgatggcggctcggccgtgccggggacggcgagctccaacttcacgctgctgtacatcatcatcgccgtcctcgtcggcgtgatcctgtacatggcgatccggtacggccggtcggtgatgtcggagtggcgccagctgcaggccggcggcggcggcggcgagccgcgcgccgcgctgctcgggctgagctcggacgacatcgacgcgctccccacgttcacgtaccgggcgcgcggggcggcggcgtcgccgctggtcggcggcggcgggaggaggggcggcggcagcggcaaggggaagggggcgacgacggtggtggtggagtgcgtggtgtgcctgcaggagctcgccgacggcgacgtggtgcgcgtgctgccggcgtgcaggcacttcttccacggcggctgcatcgacctctggctgcgcgcccactccacgtgcccggtgtgccgcgcgcacccggagcccgacggcgtgcggctcagcgacgtcgtggccgtgtcgccgccgctgccgcagctgcgccggtgcggcctgtcgccggagcggcccacggcggcgtcgcgcgccctggcggacatcctggcacgttctccattgaggggcaacaccacctcgacgacgaccaccaccaccaccggcggaccgatcacgtcgacgtcgtcgaagtcgccgtcgtcaccggttcaagcggcgatcatcaactacgtgcaggcctcacgttcgccgtctccgacggcgtaccacagcctgaacgagcggtggccgagctcgccgacgccggttgtggttgtgcggtcgaagtcgccgtcgccgtcgtcgccaccgataggtggtctgagtctgcagacgacgacggcggcggcggcgagaggcgtcggcgtggtggaaggggtggatgcaggtgcaaccacgtcggcgtcggcgtcggcgccaacgcaggtggtggcgctgtcaagggaaggtggtggttcgcggtccaagtcgccgtcgccgctctacgcggggaacgccggcggcggcggcggtagcgcccgcgcggcgccggcggtgcggctgcaggtgcgccggtgcgcgtcgtgcgggctcgccgcccaggccatcgacgcgctgcccgcgttcgcgtacgagccccccgccgccgacgtcgaggacggcggcgagggcaagccgcgcggcggcggcgcgctgtgcgcggtgtgcctggaggacgtcgtggccggcgagacggtgcggcggctgccgtcgtgcgggcacctcttccacgtggactgcatcgacatgtggctgcacgcgcaccggacttgcccgctctgccgccgcgacctctcgccggagaaggtcaccgcgaaatcctccgccgccgccgtcgccgccgcgacggtctcctccaccgacgtgctgccgccgcatttcgtaggaatttggcacgaaataaatcagttcaaatcatcggagaaatcgctggtcgggatgcccgaggcggcggcggcggaggaggaaggcggtgatggctgctcgacgaggctagggtgctacggcttcatggcggtgaacgtcctgatggggctgtactgctccatcgcctacgccgtgagcgccaccgtggcgggcgccgtcgccgtcgcggtcgcgctcctcctgctggcgctcgccggcaggctggcgcagacgacgggaggaggctccgccgcggcggaagcgtcggggcggcggcggcggctgctgagctgcccgtgcgcgtgcgggctgatggcgcccggcgcgggggggatcggcgtgctgccggcgttcgcgtacgagcccggcggcggcggcggcggcgtgctgtgcgcggtgtgcctggaggacttgcgcggcggcgagatggtgcggcggctgccggcgtgcgggcacctgttccacgaggactgcgtcgacgtgtggctgcgcgtccgccggacttgcccgctctgccgccgcgtgctcccgccgcgcaagtccgtggcggccgcggcggcggcgtcggccgctgtgctgccgcctgtctga

More
Protein seq

MPDDSASSTLQYTGIGAFVAIVGIVVLAVIFYTRSSARHAAPGAAPDAVTALQGQQQQRGVGLGPDDVSVLPTFTYHAAATASPGRCGLIGRGDAKAAADCCAVCLDELGEGAVVRMLPSCKHYFHATCVDVWLLSRATCPVCRGSPGQEKVRLGLASLSPPLPQLRRCAPSPPKEAAAAAAADTSRANDDDSSAAASRSPSPIRSSTRFDLAAAAIDAAARSPAMSPSPTSPWTPESVARVSRSPSPVTTTAMTDLHVVEVSGGGDGGSAVPGTASSNFTLLYIIIAVLVGVILYMAIRYGRSVMSEWRQLQAGGGGGEPRAALLGLSSDDIDALPTFTYRARGAAASPLVGGGGRRGGGSGKGKGATTVVVECVVCLQELADGDVVRVLPACRHFFHGGCIDLWLRAHSTCPVCRAHPEPDGVRLSDVVAVSPPLPQLRRCGLSPERPTAASRALADILARSPLRGNTTSTTTTTTTGGPITSTSSKSPSSPVQAAIINYVQASRSPSPTAYHSLNERWPSSPTPVVVVRSKSPSPSSPPIGGLSLQTTTAAAARGVGVVEGVDAGATTSASASAPTQVVALSREGGGSRSKSPSPLYAGNAGGGGGSARAAPAVRLQVRRCASCGLAAQAIDALPAFAYEPPAADVEDGGEGKPRGGGALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPEKVTAKSSAAAVAAATVSSTDVLPPHFVGIWHEINQFKSSEKSLVGMPEAAAAEEEGGDGCSTRLGCYGFMAVNVLMGLYCSIAYAVSATVAGAVAVAVALLLLALAGRLAQTTGGGSAAAEASGRRRRLLSCPCACGLMAPGAGGIGVLPAFAYEPGGGGGGVLCAVCLEDLRGGEMVRRLPACGHLFHEDCVDVWLRVRRTCPLCRRVLPPRKSVAAAAAASAAVLPPV

Function E3 ubiquitin-protein ligase ATL9 [UniProtKB/Swiss-Prot:O64763]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_06g0018190 OsARC_06g0018190.01 Chr06 20855974 20871590 + NAM
CDS seq

atgcccgacgactcggcgtcgtcgacgctgcagtacacgggcatcggcgcattcgtcgccatcgtcggcatcgtcgtcctggccgtcatcttctacacccgttcgtccgcccgtcacgccgcccccggcgcggcgcccgacgcggtcaccgcgctccaggggcagcagcagcagcgcggcgtcggcctcggccccgacgacgtctccgtgctcccgacgttcacgtaccacgccgccgccaccgcctcgcccggccgatgcggcctgatcggacgcggggacgcgaaggcggcggcggactgctgcgccgtctgcctcgacgagctcggcgagggcgccgtcgtgcgcatgctgccgtcgtgcaagcactacttccacgccacctgcgtcgacgtctggctgctgtcgcgggccacgtgcccggtgtgccgggggagcccagggcaggagaaggtccgcctcggcctcgcgtccctctcaccgccgctgccgcagctgcgccggtgcgcgccgtcgccgcccaaggaggccgccgccgccgccgctgccgatacgtcgagagccaacgacgatgactcctccgcagccgcgtcgaggtcgccatccccgataagatcgagcacgcgtttcgacctcgcggccgccgccattgacgccgccgcccgtagtccggcaatgtcgccgtcgccgactagcccgtggactccggagagtgtggcgcgggtgtcaaggtcaccgtctcccgtgacgacgacggcgatgaccgatttgcacgtggtcgaagtctccggtggtggcgatggcggctcggccgtgccggggacggcgagctccaacttcacgctgctgtacatcatcatcgccgtcctcgtcggcgtgatcctgtacatggcgatccggtacggccggtcggtgatgtcggagtggcgccagctgcaggccggcggcggcggcggcgagccgcgcgccgcgctgctcgggctgagctcggacgacatcgacgcgctccccacgttcacgtaccgggcgcgcggggcggcggcgtcgccgctggtcggcggcggcgggaggaggggcggcggcagcggcaaggggaagggggcgacgacggtggtggtggagtgcgtggtgtgcctgcaggagctcgccgacggcgacgtggtgcgcgtgctgccggcgtgcaggcacttcttccacggcggctgcatcgacctctggctgcgcgcccactccacgtgcccggtgtgccgcgcgcacccggagcccgacggcgtgcggctcagcgacgtcgtggccgtgtcgccgccgctgccgcagctgcgccggtgcggcctgtcgccggagcggcccacggcggcgtcgcgcgccctggcggacatcctggcacgttctccattgaggggcaacaccacctcgacgacgaccaccaccaccaccggcggaccgatcacgtcgacgtcgtcgaagtcgccgtcgtcaccggttcaagcggcgatcatcaactacgtgcaggcctcacgttcgccgtctccgacggcgtaccacagcctgaacgagcggtggccgagctcgccgacgccggttgtggttgtgcggtcgaagtcgccgtcgccgtcgtcgccaccgataggtggtctgagtctgcagacgacgacggcggcggcggcgagaggcgtcggcgtggtggaaggggtggatgcaggtgcaaccacgtcggcgtcggcgtcggcgccaacgcaggtggtggcgctgtcaagggaaggtggtggttcgcggtccaagtcgccgtcgccgctctacgcggggaacgccggcggcggcggcggtagcgcccgcgcggcgccggcggtgcggctgcaggtgcgccggtgcgcgtcgtgcgggctcgccgcccaggccatcgacgcgctgcccgcgttcgcgtacgagccccccgccgccgacgtcgaggacggcggcgagggcaagccgcgcggcggcggcgcgctgtgcgcggtgtgcctggaggacgtcgtggccggcgagacggtgcggcggctgccgtcgtgcgggcacctcttccacgtggactgcatcgacatgtggctgcacgcgcaccggacttgcccgctctgccgccgcgacctctcgccggagaaggtcaccgcgaaatcctccgccgccgccgtcgccgccgcgacggtctcctccaccgacgtgctgccgccgcatttcgtaggaatttggcacgaaataaatcagttcaaatcatcggagaaatcgctggtcgggatgcccgaggcggcggcggcggaggaggaaggcggtgatggctgctcgacgaggctagggtgctacggcttcatggcggtgaacgtcctgatggggctgtactgctccatcgcctacgccgtgagcgccaccgtggcgggcgccgtcgccgtcgcggtcgcgctcctcctgctggcgctcgccggcaggctggcgcagacgacgggaggaggctccgccgcggcggaagcgtcggggcggcggcggcggctgctgagctgcccgtgcgcgtgcgggctgatggcgcccggcgcgggggggatcggcgtgctgccggcgttcgcgtacgagcccggcggcggcggcggcggcgtgctgtgcgcggtgtgcctggaggacttgcgcggcggcgagatggtgcggcggctgccggcgtgcgggcacctgttccacgaggactgcgtcgacgtgtggctgcgcgtccgccggacttgcccgctctgccgccgcgtgctcccgccgcgcaagtccgtggcggccgcggcggcggcgtcggccgctgtgctgccgcctgtctga

More
Protein seq

MPDDSASSTLQYTGIGAFVAIVGIVVLAVIFYTRSSARHAAPGAAPDAVTALQGQQQQRGVGLGPDDVSVLPTFTYHAAATASPGRCGLIGRGDAKAAADCCAVCLDELGEGAVVRMLPSCKHYFHATCVDVWLLSRATCPVCRGSPGQEKVRLGLASLSPPLPQLRRCAPSPPKEAAAAAAADTSRANDDDSSAAASRSPSPIRSSTRFDLAAAAIDAAARSPAMSPSPTSPWTPESVARVSRSPSPVTTTAMTDLHVVEVSGGGDGGSAVPGTASSNFTLLYIIIAVLVGVILYMAIRYGRSVMSEWRQLQAGGGGGEPRAALLGLSSDDIDALPTFTYRARGAAASPLVGGGGRRGGGSGKGKGATTVVVECVVCLQELADGDVVRVLPACRHFFHGGCIDLWLRAHSTCPVCRAHPEPDGVRLSDVVAVSPPLPQLRRCGLSPERPTAASRALADILARSPLRGNTTSTTTTTTTGGPITSTSSKSPSSPVQAAIINYVQASRSPSPTAYHSLNERWPSSPTPVVVVRSKSPSPSSPPIGGLSLQTTTAAAARGVGVVEGVDAGATTSASASAPTQVVALSREGGGSRSKSPSPLYAGNAGGGGGSARAAPAVRLQVRRCASCGLAAQAIDALPAFAYEPPAADVEDGGEGKPRGGGALCAVCLEDVVAGETVRRLPSCGHLFHVDCIDMWLHAHRTCPLCRRDLSPEKVTAKSSAAAVAAATVSSTDVLPPHFVGIWHEINQFKSSEKSLVGMPEAAAAEEEGGDGCSTRLGCYGFMAVNVLMGLYCSIAYAVSATVAGAVAVAVALLLLALAGRLAQTTGGGSAAAEASGRRRRLLSCPCACGLMAPGAGGIGVLPAFAYEPGGGGGGVLCAVCLEDLRGGEMVRRLPACGHLFHEDCVDVWLRVRRTCPLCRRVLPPRKSVAAAAAASAAVLPPV

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.000000 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0534800 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g34400 RBH 0.175492 0.203121 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os06g0534500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0018420 RBH 0.0 1.718868 0.532589
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0018250 RBH 0.0 0.469611 0.139320
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0018330 RBH 0.384498 0.515988 5.341099
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0010450 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0018570 RBH 0.747739 3.548754 2.726697
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0315100 RBH 0 0.022669 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0018060 RBH 0.0 0.342595 0.175688
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0290700 RBH 0.0593175 0.41654 0.081788
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0018490 RBH 0.019882 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0018430 RBH 0.067341 0.977566 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0018080 RBH 18.862368 0.917908 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0018830 RBH 0.000000 0.0 0.279381
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0018270 RBH 0.073131 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G018160 RBH 0.000000 0.0 0.117864
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0018300 RBH 2.827293 0.0 0.703848
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.