Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_06g0007510 | OGI:06015750 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr06:5582357-5584492 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCACCGGCCGCCTTGCAGCGAGCTGGCCGACATGGTGCCGCCGGCGGAGGATGACGTCATGGACACGACGAACGAGCCACCGAAGAGATCGGACGAGTCGGCGCCGGAGAAGATCGCCGCCGGCGTGGCGTCCTCCTGCAGCATCTCCTCGCCGTCGAGATACCGGCACACCTGCCTCATGCTGGGCCTCGCCTCCGGCCTCGCCTGGCTGCACATCAGCCCGAGCCACAGCACCAGCCTCGCCTCCTCCTCGTCGTAGCACCCCTCCAGCCTCGGGTCCACGGCTCGCAGCACGTCGCCGCCGCCGCCGTCGCCGTCGAGCGCGCGGTCTCGCACCCACCGCACCAGGAGCACGTCGCCGTCCGCCTCCCCCGCCGCCGCCGGCTCGATCGGGCGGCGCCCGCACGCCACCTCGAGGAGCAGCGCGCCGAAGGAGAACACGTCGGTGGCCGTCGTGGCGCGGCTGGTGAACGTGAGCTCGGGCGCCATGTAGCCCAGCGTGCCGGCCACGCGCGTCGTCGCCGGCGTCGCACCGTGCTCGTAGAGCCGCGCGAGGCCGAAGTCGCCGAGCCGGGCGGCCCCCGTGTCGCCGGCGCCGAGGAGCACGTTGTTCGCCTTCACGTCGCGGTGCACCACCACGTGCTCCCACTCCTCGTGCAGGTAGAGCAGGCCATGGGCGACGCCCTTGAGGATGGCGAACCGCTGCGCCCACGTCAGAAGCGGCGGCGGCGGTGGCGCTTTCACCCCCTCCGCCGCCGCCGCCGACGCCGCCGTGCCGAACAGCCGCGCATCGAGGCTGCCGCCGGGCATGAACTCGTAGACGAGGAGCAGGTCCTGGTCGTGCTTGCACCACCCGCGCAGCTCGACCAGGTTGCGGTGGCGCATCCGCCCGAGGCTGGCGACCTCAGCGACGAACTCCCTCATCCCTTGCCGTGTCCCGTTCGAGATCCGCTTGATCGCCACCGCCTCGCCGGAGCGGCGCCGGAGCACGCCTCTGTACACCTGGCCGAAGCCGCCGGCGCCAAGGAGCTCGCTCTCCTTGAACCCCTTGGTCGCCTTGTAGAGCTCCTTGTACGGGATCCTCTGAGGGTGCTCCAGCTCCCACTCCTCCAGCGTGTCGGCGAGCGCCGCCCTTCGCCGGAGCCAGAGCACGGCGACCATCGCCGCGGCGATCAGGGTGAGTGTTCCTGCACAGGCCACCGCGGCGAACTTGATGATGAGCAGCTTGGGCGGCGGCGAGCTCTGCCTCGGGACTTTGGGCAGCCTCCGGAGATCGATGGATTGCGCGACGCCGTTCGTCCGGAAGCTCCATGCCAAGATGTAGTGCGAGCTCGCCAGCTTCCCCGTCGCCGACGAGAACCCGACGTACATGTTCTCCTTGAAGATCGGCAGGAGGTCGAGCTTCGTGGAGATGAGCGGCCGGCGAGGCCGCTCCGTCACCGTCGCCGGCGCGACGGTGACGTTGAGGATGCTGCTGCCGCCGTCGTAGTCTATCCACGCCTGGATTTGCTGCGCGCTCTCCAGCTGCACGGGCACCTTGGTGCTCCCGTCGCCGGCGTAGTACACCACCGGCTCCGACACGACCGACACGAGGCTGTTCACGTCGACGCCGACGTGGTTGCCGTTGGTGTCGTTCATCTCGAGGTCCATCACCGTGTCGAACTCGACGGCGAAGACGTGGTCGGACGCGTTCCCGTTGGTGCGGGGCCCGAGGACGCCGAGGTAGATCTCCGGGGACGCGCCGGGGAGCGTGGCGGACGGCGCCACCACGAACGCGAGGCCGTGGCCGCCGCCGCTCCCGACGGTGACGATGTCGAGGACGAACGCCGTGCTGAACGACGACACCACTCCTCCCCCGCCGCCGCCGCCGGCGCCGTCGTCGAGAAACCGCACCGGCGCGGCGTGGAACGCGTGGCCGACGAGGCGGTTGCTGTCGTTGGTGAGCTGGAGCGCGCCGCCGTGCAGCACCTTCGCCGACCCGTCCATGGTCAGGTTCGCCGCGTGCTGGAAACCTTGGTAGATGAAGTCGACGCCGCCGTCGCCGCCGCCGTCGTCGGCCGAGGAAGAACGAGACGAGACGACGATCACGACGAACAATCGCACGGCGAAACGCAGAACGGTATCGCGTGCGATCAT
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| CDS seq | ATGATCGCACGCGATACCGTTCTGCGTTTCGCCGTGCGATTGTTCGTCGTGATCGTCGTCTCGTCTCGTTCTTCCTCGGCCGACGACGGCGGCGGCGACGGCGGCGTCGACTTCATCTACCAAGGTTTCCAGCACGCGGCGAACCTGACCATGGACGGGTCGGCGAAGGTGCTGCACGGCGGCGCGCTCCAGCTCACCAACGACAGCAACCGCCTCGTCGGCCACGCGTTCCACGCCGCGCCGGTGCGGTTTCTCGACGACGGCGCCGGCGGCGGCGGCGGGGGAGGAGTGGTGTCGTCGTTCAGCACGGCGTTCGTCCTCGACATCGTCACCGTCGGGAGCGGCGGCGGCCACGGCCTCGCGTTCGTGGTGGCGCCGTCCGCCACGCTCCCCGGCGCGTCCCCGGAGATCTACCTCGGCGTCCTCGGGCCCCGCACCAACGGGAACGCGTCCGACCACGTCTTCGCCGTCGAGTTCGACACGGTGATGGACCTCGAGATGAACGACACCAACGGCAACCACGTCGGCGTCGACGTGAACAGCCTCGTGTCGGTCGTGTCGGAGCCGGTGGTGTACTACGCCGGCGACGGGAGCACCAAGGTGCCCGTGCAGCTGGAGAGCGCGCAGCAAATCCAGGCGTGGATAGACTACGACGGCGGCAGCAGCATCCTCAACGTCACCGTCGCGCCGGCGACGGTGACGGAGCGGCCTCGCCGGCCGCTCATCTCCACGAAGCTCGACCTCCTGCCGATCTTCAAGGAGAACATGTACGTCGGGTTCTCGTCGGCGACGGGGAAGCTGGCGAGCTCGCACTACATCTTGGCATGGAGCTTCCGGACGAACGGCGTCGCGCAATCCATCGATCTCCGGAGGCTGCCCAAAGTCCCGAGGCAGAGCTCGCCGCCGCCCAAGCTGCTCATCATCAAGTTCGCCGCGGTGGCCTGTGCAGGAACACTCACCCTGATCGCCGCGGCGATGGTCGCCGTGCTCTGGCTCCGGCGAAGGGCGGCGCTCGCCGACACGCTGGAGGAGTGGGAGCTGGAGCACCCTCAGAGGATCCCGTACAAGGAGCTCTACAAGGCGACCAAGGGGTTCAAGGAGAGCGAGCTCCTTGGCGCCGGCGGCTTCGGCCAGGTGTACAGAGGCGTGCTCCGGCGCCGCTCCGGCGAGGCGGTGGCGATCAAGCGGATCTCGAACGGGACACGGCAAGGGATGAGGGAGTTCGTCGCTGAGGTCGCCAGCCTCGGGCGGATGCGCCACCGCAACCTGGTCGAGCTGCGCGGGTGGTGCAAGCACGACCAGGACCTGCTCCTCGTGGCGTGCGGGCGCCGCCCGATCGAGCCGGCGGCGGCGGGGGAGGCGGACGGCGACGTGCTCCTGGTGCGGTGGGTGCGAGACCGCGCGCTCGACGGCGACGGCGGCGGCGGCGACGTGCTGCGAGCCGTGGACCCGAGGCTGGAGGGGTGCTACGACGAGGAGGAGGCGAGGCTGGTGCTGTGGCTCGGGCTGATGTGCAGCCAGGCGAGGCCGGAGGCGAGGCCCAGCATGAGGCAGGTGTGCCGGTATCTCGACGGCGAGGAGATGCTGCAGGAGGACGCCACGCCGGCGGCGATCTTCTCCGGCGCCGACTCGTCCGATCTCTTCGGTGGCTCGTTCGTCGTGTCCATGACGTCATCCTCCGCCGGCGGCACCATGTCGGCCAGCTCGCTGCAAGGCGGCCGGTGA
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| Protein seq | MIARDTVLRFAVRLFVVIVVSSRSSSADDGGGDGGVDFIYQGFQHAANLTMDGSAKVLHGGALQLTNDSNRLVGHAFHAAPVRFLDDGAGGGGGGGVVSSFSTAFVLDIVTVGSGGGHGLAFVVAPSATLPGASPEIYLGVLGPRTNGNASDHVFAVEFDTVMDLEMNDTNGNHVGVDVNSLVSVVSEPVVYYAGDGSTKVPVQLESAQQIQAWIDYDGGSSILNVTVAPATVTERPRRPLISTKLDLLPIFKENMYVGFSSATGKLASSHYILAWSFRTNGVAQSIDLRRLPKVPRQSSPPPKLLIIKFAAVACAGTLTLIAAAMVAVLWLRRRAALADTLEEWELEHPQRIPYKELYKATKGFKESELLGAGGFGQVYRGVLRRRSGEAVAIKRISNGTRQGMREFVAEVASLGRMRHRNLVELRGWCKHDQDLLLVACGRRPIEPAAAGEADGDVLLVRWVRDRALDGDGGGGDVLRAVDPRLEGCYDEEEARLVLWLGLMCSQARPEARPSMRQVCRYLDGEEMLQEDATPAAIFSGADSSDLFGGSFVVSMTSSSAGGTMSASSLQGGR |
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| Function | L-type lectin-domain containing receptor kinase V.9 [UniProtKB/Swiss-Prot:Q9SZD5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_06g0007510 | OsARC_06g0007510.01 | Chr06 | 5582357 | 5584492 | - | NAM | ||
| CDS seq | ATGATCGCACGCGATACCGTTCTGCGTTTCGCCGTGCGATTGTTCGTCGTGATCGTCGTCTCGTCTCGTTCTTCCTCGGCCGACGACGGCGGCGGCGACGGCGGCGTCGACTTCATCTACCAAGGTTTCCAGCACGCGGCGAACCTGACCATGGACGGGTCGGCGAAGGTGCTGCACGGCGGCGCGCTCCAGCTCACCAACGACAGCAACCGCCTCGTCGGCCACGCGTTCCACGCCGCGCCGGTGCGGTTTCTCGACGACGGCGCCGGCGGCGGCGGCGGGGGAGGAGTGGTGTCGTCGTTCAGCACGGCGTTCGTCCTCGACATCGTCACCGTCGGGAGCGGCGGCGGCCACGGCCTCGCGTTCGTGGTGGCGCCGTCCGCCACGCTCCCCGGCGCGTCCCCGGAGATCTACCTCGGCGTCCTCGGGCCCCGCACCAACGGGAACGCGTCCGACCACGTCTTCGCCGTCGAGTTCGACACGGTGATGGACCTCGAGATGAACGACACCAACGGCAACCACGTCGGCGTCGACGTGAACAGCCTCGTGTCGGTCGTGTCGGAGCCGGTGGTGTACTACGCCGGCGACGGGAGCACCAAGGTGCCCGTGCAGCTGGAGAGCGCGCAGCAAATCCAGGCGTGGATAGACTACGACGGCGGCAGCAGCATCCTCAACGTCACCGTCGCGCCGGCGACGGTGACGGAGCGGCCTCGCCGGCCGCTCATCTCCACGAAGCTCGACCTCCTGCCGATCTTCAAGGAGAACATGTACGTCGGGTTCTCGTCGGCGACGGGGAAGCTGGCGAGCTCGCACTACATCTTGGCATGGAGCTTCCGGACGAACGGCGTCGCGCAATCCATCGATCTCCGGAGGCTGCCCAAAGTCCCGAGGCAGAGCTCGCCGCCGCCCAAGCTGCTCATCATCAAGTTCGCCGCGGTGGCCTGTGCAGGAACACTCACCCTGATCGCCGCGGCGATGGTCGCCGTGCTCTGGCTCCGGCGAAGGGCGGCGCTCGCCGACACGCTGGAGGAGTGGGAGCTGGAGCACCCTCAGAGGATCCCGTACAAGGAGCTCTACAAGGCGACCAAGGGGTTCAAGGAGAGCGAGCTCCTTGGCGCCGGCGGCTTCGGCCAGGTGTACAGAGGCGTGCTCCGGCGCCGCTCCGGCGAGGCGGTGGCGATCAAGCGGATCTCGAACGGGACACGGCAAGGGATGAGGGAGTTCGTCGCTGAGGTCGCCAGCCTCGGGCGGATGCGCCACCGCAACCTGGTCGAGCTGCGCGGGTGGTGCAAGCACGACCAGGACCTGCTCCTCGTGGCGTGCGGGCGCCGCCCGATCGAGCCGGCGGCGGCGGGGGAGGCGGACGGCGACGTGCTCCTGGTGCGGTGGGTGCGAGACCGCGCGCTCGACGGCGACGGCGGCGGCGGCGACGTGCTGCGAGCCGTGGACCCGAGGCTGGAGGGGTGCTACGACGAGGAGGAGGCGAGGCTGGTGCTGTGGCTCGGGCTGATGTGCAGCCAGGCGAGGCCGGAGGCGAGGCCCAGCATGAGGCAGGTGTGCCGGTATCTCGACGGCGAGGAGATGCTGCAGGAGGACGCCACGCCGGCGGCGATCTTCTCCGGCGCCGACTCGTCCGATCTCTTCGGTGGCTCGTTCGTCGTGTCCATGACGTCATCCTCCGCCGGCGGCACCATGTCGGCCAGCTCGCTGCAAGGCGGCCGGTGA
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| Protein seq | MIARDTVLRFAVRLFVVIVVSSRSSSADDGGGDGGVDFIYQGFQHAANLTMDGSAKVLHGGALQLTNDSNRLVGHAFHAAPVRFLDDGAGGGGGGGVVSSFSTAFVLDIVTVGSGGGHGLAFVVAPSATLPGASPEIYLGVLGPRTNGNASDHVFAVEFDTVMDLEMNDTNGNHVGVDVNSLVSVVSEPVVYYAGDGSTKVPVQLESAQQIQAWIDYDGGSSILNVTVAPATVTERPRRPLISTKLDLLPIFKENMYVGFSSATGKLASSHYILAWSFRTNGVAQSIDLRRLPKVPRQSSPPPKLLIIKFAAVACAGTLTLIAAAMVAVLWLRRRAALADTLEEWELEHPQRIPYKELYKATKGFKESELLGAGGFGQVYRGVLRRRSGEAVAIKRISNGTRQGMREFVAEVASLGRMRHRNLVELRGWCKHDQDLLLVACGRRPIEPAAAGEADGDVLLVRWVRDRALDGDGGGGDVLRAVDPRLEGCYDEEEARLVLWLGLMCSQARPEARPSMRQVCRYLDGEEMLQEDATPAAIFSGADSSDLFGGSFVVSMTSSSAGGTMSASSLQGGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0210400 | RBH | 0.103101 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g10790 | RBH | 0.069723 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0210400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0007590 | RBH | 0.104554 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0007430 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0007440 | RBH | 0.530188 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0035230 | SBH | 0.0 | 0.202998 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0007430 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0093800 | RBH | 1.1061885 | 1.7525315 | 0.50122 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0007220 | RBH | 0.182903 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0093900 | RBH | 0.8675765 | 0.9911125 | 0.08501 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0007610 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0007490 | RBH | 0.114934 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0007540 | RBH | 0.0 | 7.931113 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0007560 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0007400 | RBH | 0.068924 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G007300 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0007580 | RBH | 0.253607 | 0.0 | 0.0 |
