Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_06g0001180 | OGI:06002240 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr06:935692-940823 | ||||||||
| Gene Symbol | DJA9, OsDjA9, DjA9 | ||||||||||
| DNA seq | AATACTAATTCGGTGCCAGCATACAATGCATAAAAAGATTTATGAACTCTGTTCTGTTCCAGTGTCCTTTCCAGCAAGAATTGCTGGGAACAAAATTGAGAACCTGAAAAATGAATAGAGCCAATATCAACTCAACGAGTGGCACGAGTCCAGAGGTTGGTACCGTGAGTTCCATACTTTCTTAACACACAAAATTATACAATACAGGATCCTGCCGCCTGTCTCACTGATGCTAGTGACATTAGGAGATTGCAAACATCAGGCGGCGTGGTGTATATTATTCCCAGCTACAAAATTTGAAACTGCTATATGTCGGCATGTAAAATTCCATGCATCCAACCAAACTATATCTTCTTGCCCCTGCAAATTTCAGGCAGCAGCCTATTCTATCTCGCGATATATGATGAGACTAAAGCACTAATCAAATGTACGGGTCGCTCCTAAAATCAGCTATCCCGATGCTCCTGCTGCCTTTGCGTCTTTCTCCTCTTCAGCTTGCTCTTCCTTCGCAAATTCCTCGATCAGCACGCGCTGTCTCGGTGTCAAATTCCTGTGTATAAGTAATACATGAATATTTGAACAGAAGTACTAGTAACAGCATAGGGCAGTTCAGTAAGTTCCGAGGAGAGCTTACGCAGGGATGTTGACATTGAAGTGGACATACTGATCTCCATAGTACGATGAATTTCTCGTCTTGATTCCTGCAGGATAAAGTGATGCTTATCACTATAGGCAAAATGAAATGTATCAACCGCTACAAATTTATGAGCCATGACGGCACTGGGTTTTAATAAAACAAGGCCCTTGCAGACTCCATTTTTACTTGGATGTGTAACTGAGCATGAAGTATTAAACATGCAGCCATATGCAATTTATGCTAACTAAAAAAAAAATTTTGCCCCACGAAAAGGTAAACACTATGTAGTGCAGTTTACCTTTTCCTCTCAGAACCACCTTTTGGCCAGGCTGAGTACCAGGCTTGACCTGTAATATGCAAGGCAGATGGAGAATTCCGACATAATAAACAAAGGAGAAGATTGAAAATGAGGGTAAACTGATTTTGGAGGTACCTTTAGAACTACATCTCCAGAGAGAGTTGGAACCTGAACTGTCCCGCCCAAAATTGCCTACAAAGATGTTTGCAGTTAATCTTAATCTGAATACTGATGAAATATGAGAACTGTGGAGGAGATGCCTACTCGACAACATTACAAGTTTTGTTTAGTATCACTAGAGATTATCAGACAATCACCACAGCATCGTTACTCGCTAGAGATAACATACTTTAGCTAGTTTTAACATTCAAACTACTGTGAAAAACAATTGTTGTTTGCCTGCTCTGTGGCAAATAAGGAACAGTCTAATAACAACAGTTTGTTCTAAGATTAAAGGGAACAGACATAATCTGCTAACACTAACTTGTTATCACCCAGCCCTAGAAGGCTATGCACAATCCTGCTTACAGACCACTACCACACTCCCACTCAGATTACCAGCTCAGCCAAAACAGAATGTAGTGACAACGAAGTATGGCCGGTAACTGAGTTTTTCTGTTTTCCCGCTAGGGATGTCCATTACTGAGCTGTGCAGTGGCAAATATAAGCATAGGATGCAGAAAAAATAATCAGGCTCAACTTACCTGAGTCACGTTCAATACAGCATCTACATGAATATCACCTTTCTCTCTTCGAAATACCGGATCCTCACGAACCTGGAAAAAACAGCATTACAAAGGTCATCTGCTTATCATCTTTTTCTCAAATATGCAGGAGAGCCGTGCATCATTGCATCAAGGGGAAAAGAATTGGAACAAATGACCAGACACTACTCTTGCACTGGGATCAACCTACAGCTAGTTGCACCGAGTGCTTGGTCCTGTCTGATCCCAAAGTAAGGTTTCAACTGCCTATTACCATTCATTGGCCAATGGTATAACTGCTAATGTGCAGAGGACTAACCTTCAGAGTTACATAAAGATCACCAGGACTACCACCATCTGGATCTGCTCCACCTGATCTAACCAACTTTATAACGTCACCATCATCCGTACCTGAATGAACAGAATAATGCTCAAGGACATTTAGTAACACAAAATAAGAGTATATGCGTACAAATAACATGAATGCTGACAATTTGAAAACTACCAGGCACTATGTTGAGTCGGATGTTTTTTGTTCCTGGCACAACTTTCCTTCCTTTGCATGACTTGCAGAATTCCTAACAACACAAGAACATTGCAATCACCAGCTCATCGTGACTAATCAGAATCTAGACACTGTACAAAAGGTATATAGGAGCAAATATAACATCAGAGGTCAAGTGCATATTTATTTCATAAAGAACAGCATGGTTCAGAAGTTATTGTTGTGGCTGATTTCAATTCATATATCTAATATCAGACAACTGGACTTAGGTGCAGTCAACAACCACCTGCATCACAAGTTAAATGACCACAAATTGAAAAAAATCAGAGGGGTTGATACACGTAATGAATAAGGATTGTAAGATGGTCAAATTTAGAAATACCGAACCCTACATCACAAAGCAATTCTGGTCAGGTAGGTACGGAATTTTATGTCCTAAGGACAACAACTCTAAACAGTTAACCTCCTAGATGATTTATTGAAGGCTAGATAACTGATTTATCCTGACTGCAGGTTATCAACACAAAGGGACATCATACCTTCACAGTCTTCCCACTACCACCACACTGTGTGCATGTTGATTGCATCCTGAAGGGACCAGTTTGCATGAAGATCTTCCAACAGCACATGAAAAACAAAGACAAATAAGCACAGTACTAACATTTAAATGAGATACCACATTAAATAGAAATAATTGTGCTAGAGGAAGAACTAACAAATCCTGAACCCCTGCAGGCTAGGCAAGTTTCAGGTTTGGTTCCAGGGGGTACGCCAGCTCCCTCTGGGAAAACAAAGAACTCTCATTAGATGATTAGGAACAATTCAAAGGACATCGATAGTTTGATATGTGCAGTAAATAGAAGCGCATCTACATACTGCAGGTGTCACATGTAACAGCAGTCTGAAAATTGATCGTCTTTGTGCACCCCTGAACTGCTTCCATAAATGATATTTCAAGTGCAACCTGTAGAATGGAACATGAAACTGCGATTCACAGAGCAAAAACATGATAGGTGAAAAAAAAATGAGTATAGAGCTAACCTTGGCATCATGCCCGCTAAATTCTCTCTCTCTGAATATGTTTCTAAAGAACTTCATTATACACACAGACAACAAAAGTCATATTAGTGCCGTTATATGAATTTCCAGACAACAGTATCTTTTTTCTGTATATACTCAGCAACATGAGTGATAGAAAACAATACAAACTAAATGGGAGCAGAACCACCAGAATAAAACCAGATGACAAATAATTAAACAAAAGATAGCATACATCATTCATTCCACCGCCGCCGCCACCTCCACCAAAAATATCCTCAAACGGATTGCCAAAACCCCCTTCATATGCACCACCAGGTCCTCCTCCAGCGGAAGCTTTCTCATACTGATCAGGGCCAACCTGTAATAGATCATGTCAAGGACAAGTTTGTGTTCAAAAGCTTGTATTGTAAACTTCTAAGACATAGCTTCTGACCCTAGGGTATAGCAACGAAAAGCAATAATCACATAATAGTCAAGTTGAATTATTACTACCACTAATTATGAGAATAGGATAACTAATGAATCTGGGCAGTGCTCTACAAGGTAATTGAAAGCTTGCGGCTTGGCAGCACCTTCCTGTCTAGCCTACCTAGGCAGGCAGCCTAGGGCCTTGGTAAACACTAAATTGAGGTTCCAGACCCATGGTAATTTAAATAATAGACCTTAGGCATTGACAGCTAAAATGTTGGCATTTGTTCAATTAAATAGGTTGAAATTGTTACCTGATCATATAATGATCTCTTCTGATCATCCTTCAAAGTCTGCAAAGAAGGAAAAATAAGTATGTCTCAGTATATTATCAGAAACTAATAATAACCTTTACCTATGTATTCCATGCTGAAAACTGTACCTCATAAGCTCGCTGAACCTCTTGAAACTTCCTCTCTGCATCAGAATCACCTTTATTTGTATCCGGATGGAGCTTTTTCGCAAGCTTTTAGGACAACAAAGAAAAAAAAAGGGATTGTGAGGTAAACAATACGCGATGATTTTTTTTTCTTTCGATGGTGCATAAGGAAAGGAAATGCCAATGTTTTCTATATTAACACAAGGCTAATACATAACTAAAATTGAGGATGAGAAATGGTAAATCAAACAACCTCAACTGCCCTTTACTCAAGAGTCCATCAACCACTTTTCAGAAACATTCTGGTAGACAAAAAAACTGGTAGATACCCATCAACTTGCGGTTAACATTACTGTTCCAAAATCCAAATGGGTGATGATCTTTCTATGCACAAGTCCTGAAGTGTAATGATGGGAACTTCCAAAGTCTATCACTAAAATTAGCAACTAAAAGTTTAGTCTTCACTTTATAATTCAAGACTTGCGATATAGAACTAAGATGTGCCGCGTTGGTGTGCTCAATTTACACCCTAAGCATGACATAGTCTTGATTCCAGAGCCAACCATACCGCGTAATACGCTTTCTTGATCTCCCCCTGGCTCGCGTTCCTGCTCACGCCGAGCACATCGTAGTAGTCCCTCGCTGCCACCGGCCTCGTCCCTGCAGAGCCACACGAATCCAACATCACCAATCGACTCAGCCAAGCTCACCAAACCAGAAACAGCAGCATCTCCCTTCTTCCCCTTTTTCCCCATTGTTGTCCTCACCGTGGAAGAGCCTGGCACTAGTCGGCGAGGAGAACGGCGACCTCCACGCGGGAGCCGCGGCGCGAAACGCGTCGCCCCACCTCGCTGCACACCAAAGCAACCAACCAGAAAGAAAGATCAGTCACACTGGAAGGAAATCCCAGGAAATCGGGAGAGCCACAGTGCGGGGATGAGGGCGGCGGCGGCGGCTCACCTCCGTGGGCGCGCGAGCCGTGGAAGGGGGACGCCGACGCGGCGGGCGAGGAGGAGGGGAGGGCGCGGCGGCGAGCGAGGAGGAGGGCGAGGCGAGCGCCGCCGGGGAGCCGCATGGTGGCGAGGTGAGGTCGTGTGGCC
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| CDS seq | ATGCGGCTCCCCGGCGGCGCTCGCCTCGCCCTCCTCCTCGCTCGCCGCCGCGCCCTCCCCTCCTCCTCGCCCGCCGCGTCGGCGTCCCCCTTCCACGGCTCGCGCGCCCACGGAGGACTTGTGCATAGAAAGATCATCACCCATTTGGATTTTGGAACACTTGCGAAAAAGCTCCATCCGGATACAAATAAAGGTGATTCTGATGCAGAGAGGAAGTTTCAAGAGGTTCAGCGAGCTTATGAGACTTTGAAGGATGATCAGAAGAGATCATTATATGATCAGGTTGGCCCTGATCAGTATGAGAAAGCTTCCGCTGGAGGAGGACCTGGTGGTGCATATGAAGGGGGTTTTGGCAATCCGTTTGAGGATATTTTTGGTGGAGGTGGCGGCGGCGGTGGAATGAATGATTTCTTTAGAAACATATTCAGAGAGAGAGAATTTAGCGGGCATGATGCCAAGGTTGCACTTGAAATATCATTTATGGAAGCAGTTCAGGGGTGCACAAAGACGATCAATTTTCAGACTGCTGTTACATGTGACACCTGCAAGGGAGCTGGCGTACCCCCTGGAACCAAACCTGAAACTTGCCTAGCCTGCAGGGGTTCAGGATTTATCTTCATGCAAACTGGTCCCTTCAGGATGCAATCAACATGCACACAGTGTGGTGGTAGTGGGAAGACTGTGAAGGAATTCTGCAAGTCATGCAAAGGAAGGAAAGTTGTGCCAGGAACAAAAAACATCCGACTCAACATAGTGCCTGGTACGGATGATGGTGACGTTATAAAGTTGGTTAGATCAGGTGGAGCAGATCCAGATGGTGGTAGTCCTGGTGATCTTTATGTAACTCTGAAGGCAATTTTGGGCGGGACAGTTCAGGTTCCAACTCTCTCTGGAGATGTAGTTCTAAAGGTCAAGCCTGGTACTCAGCCTGGCCAAAAGGTGGTTCTGAGAGGAAAAGGAATCAAGACGAGAAATTCATCGTACTATGGAGATCAGTATGTCCACTTCAATGTCAACATCCCTGCGAATTTGACACCGAGACAGCGCGTGCTGATCGAGGAATTTGCGAAGGAAGAGCAAGCTGAAGAGGAGAAAGACGCAAAGGCAGCAGGAGCATCGGGATAG
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| Protein seq | MRLPGGARLALLLARRRALPSSSPAASASPFHGSRAHGGLVHRKIITHLDFGTLAKKLHPDTNKGDSDAERKFQEVQRAYETLKDDQKRSLYDQVGPDQYEKASAGGGPGGAYEGGFGNPFEDIFGGGGGGGGMNDFFRNIFREREFSGHDAKVALEISFMEAVQGCTKTINFQTAVTCDTCKGAGVPPGTKPETCLACRGSGFIFMQTGPFRMQSTCTQCGGSGKTVKEFCKSCKGRKVVPGTKNIRLNIVPGTDDGDVIKLVRSGGADPDGGSPGDLYVTLKAILGGTVQVPTLSGDVVLKVKPGTQPGQKVVLRGKGIKTRNSSYYGDQYVHFNVNIPANLTPRQRVLIEEFAKEEQAEEEKDAKAAGASG |
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| Function | Chaperone protein dnaJ GFA2, mitochondrial [UniProtKB/Swiss-Prot:Q8GWW8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_06g0001180 | OsARC_06g0001180.01 | Chr06 | 935845 | 940798 | - | NAM | ||
| CDS seq | ATGCGGCTCCCCGGCGGCGCTCGCCTCGCCCTCCTCCTCGCTCGCCGCCGCGCCCTCCCCTCCTCCTCGCCCGCCGCGTCGGCGTCCCCCTTCCACGGCTCGCGCGCCCACGGAGGACTTGTGCATAGAAAGATCATCACCCATTTGGATTTTGGAACACTTGCGAAAAAGCTCCATCCGGATACAAATAAAGGTGATTCTGATGCAGAGAGGAAGTTTCAAGAGGTTCAGCGAGCTTATGAGACTTTGAAGGATGATCAGAAGAGATCATTATATGATCAGGTTGGCCCTGATCAGTATGAGAAAGCTTCCGCTGGAGGAGGACCTGGTGGTGCATATGAAGGGGGTTTTGGCAATCCGTTTGAGGATATTTTTGGTGGAGGTGGCGGCGGCGGTGGAATGAATGATTTCTTTAGAAACATATTCAGAGAGAGAGAATTTAGCGGGCATGATGCCAAGGTTGCACTTGAAATATCATTTATGGAAGCAGTTCAGGGGTGCACAAAGACGATCAATTTTCAGACTGCTGTTACATGTGACACCTGCAAGGGAGCTGGCGTACCCCCTGGAACCAAACCTGAAACTTGCCTAGCCTGCAGGGGTTCAGGATTTATCTTCATGCAAACTGGTCCCTTCAGGATGCAATCAACATGCACACAGTGTGGTGGTAGTGGGAAGACTGTGAAGGAATTCTGCAAGTCATGCAAAGGAAGGAAAGTTGTGCCAGGAACAAAAAACATCCGACTCAACATAGTGCCTGGTACGGATGATGGTGACGTTATAAAGTTGGTTAGATCAGGTGGAGCAGATCCAGATGGTGGTAGTCCTGGTGATCTTTATGTAACTCTGAAGGCAATTTTGGGCGGGACAGTTCAGGTTCCAACTCTCTCTGGAGATGTAGTTCTAAAGGTCAAGCCTGGTACTCAGCCTGGCCAAAAGGTGGTTCTGAGAGGAAAAGGAATCAAGACGAGAAATTCATCGTACTATGGAGATCAGTATGTCCACTTCAATGTCAACATCCCTGCGAATTTGACACCGAGACAGCGCGTGCTGATCGAGGAATTTGCGAAGGAAGAGCAAGCTGAAGAGGAGAAAGACGCAAAGGCAGCAGGAGCATCGGGATAG
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| Protein seq | MRLPGGARLALLLARRRALPSSSPAASASPFHGSRAHGGLVHRKIITHLDFGTLAKKLHPDTNKGDSDAERKFQEVQRAYETLKDDQKRSLYDQVGPDQYEKASAGGGPGGAYEGGFGNPFEDIFGGGGGGGGMNDFFRNIFREREFSGHDAKVALEISFMEAVQGCTKTINFQTAVTCDTCKGAGVPPGTKPETCLACRGSGFIFMQTGPFRMQSTCTQCGGSGKTVKEFCKSCKGRKVVPGTKNIRLNIVPGTDDGDVIKLVRSGGADPDGGSPGDLYVTLKAILGGTVQVPTLSGDVVLKVKPGTQPGQKVVLRGKGIKTRNSSYYGDQYVHFNVNIPANLTPRQRVLIEEFAKEEQAEEEKDAKAAGASG
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_06g0001180 | OsARC_06g0001180.02 | Chr06 | 935692 | 940823 | - | IsoSeq | ||
| CDS seq | CCACACGACCTCACCTCGCCACCATGCGGCTCCCCGGCGGCGCTCGCCTCGCCCTCCTCCTCGCTCGCCGCCGCGCCCTCCCCTCCTCCTCGCCCGCCGCGTCGGCGTCCCCCTTCCACGGCTCGCGCGCCCACGGAGCGAGGTGGGGCGACGCGTTTCGCGCCGCGGCTCCCGCGTGGAGGTCGCCGTTCTCCTCGCCGACTAGTGCCAGGCTCTTCCACGGGACGAGGCCGGTGGCAGCGAGGGACTACTACGATGTGCTCG
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| Protein seq | PHDLTSPPCGSPAALASPSSSLAAAPSPPPRPPRRRPPSTARAPTERGGATRFAPRLPRGGRRSPRRLVPGSSTGRGRWQRGTTTMCS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr06 | 936818 | 937650 | - | OsARC_06g0001180.02 | OsARC_06g0001180.01,OsARC_06g0001180.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.059296 | 0.341680 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0116800 | RBH | 4.066719 | 4.410540 | 10.257903 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g02620 | RBH | 2.696785 | 2.949742 | 2.631193 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0116800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0001240 | RBH | 1.635702 | 10.360785 | 11.328917 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0001220 | RBH | 0.155246 | 4.523037 | 7.962679 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0001180 | RBH | 1.969273 | 12.507207 | 17.082455 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0001200 | RBH | 14.751539 | 21.631601 | 29.898710 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0013900 | RBH | 6.5849775 | 11.8526435 | 28.3737755 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0001180 | RBH | 0.196456 | 1.565267 | 3.616373 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0015000 | RBH | 13.156508 | 13.0026965 | 11.7494605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0001200 | RBH | 0.979458 | 0.258215 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0001190 | RBH | 1.558718 | 22.474442 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0001210 | RBH | 11.187904 | 37.767582 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0001200 | RBH | 0.763766 | 1.098035 | 1.418189 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0001150 | RBH | 0.612781 | 8.054554 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G001190 | RBH | 1.063610 | 4.822556 | 2.913171 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0001190 | RBH | 2.473282 | 19.250938 | 15.073215 |
