Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_05g0016650 | OGI:05053630 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr05:20432934-20435328 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CGAGGGGAGGGTGGCCGCGTCGTGCTTCAGTAGTAGTGGGGGCAGTGGGCGAGTTCGTCGCGAGAGAGGAAGCAGCAGAGAGAAAGAGAGCAAAAGCAGCGAGAGGTTGTGGGGAGAGAGAGGAGCGAATTGATTAGTGTCGCCACATCGTCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCACCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCTAGCTTCTTAAGTATTTTTCTTCTTCCCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGCTTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGCGGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGCACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGGTGATCAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAAGCGGAGCTCACTTCCTCCCCTCACGGGAGCAGCCAACGCCCAGCGCCGCCACCACCCACGCCGTTCGCGCGCTTTAAAGAAGGCGCGCCACCTTCGCATAAGCTTAAAAGATTCCCCACACCACCTCCTCTCACCTCGCGCCACGAGCGTTGATCGGTGCTTTTCATTGTTCTTCCTTGCTGCAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATCGCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTAGACCTCAAGCACAACGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTGGGGCAGCTGTACCTGAACAACAACCGGTTCACCGGCGAGGTGCCGGCGCGGCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACAACGCCGACGCCATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAATGGAGGAGATTGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGTTCCAATGTGGATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACAAGAAGTAAGTTCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGTGTTTAGGTGGTGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACATTGGCTCTTGATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATGATGATGGTGGTGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAGCATAGTATCACAAGCATTCGCTGTGCTTCATTTTAGTTA
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| CDS seq | ATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATCGCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTAGACCTCAAGCACAACGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTGGGGCAGCTGTACCTGAACAACAACCGGTTCACCGGCGAGGTGCCGGCGCGGCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAA
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| Protein seq | MMAVLARLGVIVVLWAVVAEGILDPVDFLALQAVRRSLDDMPGSSFFEAWDFTADPCGFPGVFCDGNKVSALALGDPRAGSPGLSGRLDQALGRLSALTELSLVPGRVEGELPESLSSCRNLRFLAVSKNLISGQIPDGLGGLSNLRTLDVSFNQISGTIPASIATLPSITNLILCHNHLTGGIPSFPDSSPLIRLDLKHNDLSGGVPNLPSTLQYLSLSANRLTGTVDSVLPRLTRLNYLDLSMNQLDGPIPASVFTLPLSVLQLQRNFFSGLLQPANDVTIQVVDLSYNRFWGPVSPLLAGVGQLYLNNNRFTGEVPARLVQELVGSGGLQVLYLQHNFLTGIEISPASSLPSSVSLCLMYNCMVPPVYAPCPLKAGSTNTRPADQCPEWRG |
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| Function | LRR receptor-like serine/threonine-protein kinase ERL1 [UniProtKB/Swiss-Prot:C0LGW6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_05g0016650 | OsARC_05g0016650.01 | Chr05 | 20432934 | 20435328 | + | NAM | ||
| CDS seq | ATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATCGCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTAGACCTCAAGCACAACGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTGGGGCAGCTGTACCTGAACAACAACCGGTTCACCGGCGAGGTGCCGGCGCGGCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAA
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| Protein seq | MMAVLARLGVIVVLWAVVAEGILDPVDFLALQAVRRSLDDMPGSSFFEAWDFTADPCGFPGVFCDGNKVSALALGDPRAGSPGLSGRLDQALGRLSALTELSLVPGRVEGELPESLSSCRNLRFLAVSKNLISGQIPDGLGGLSNLRTLDVSFNQISGTIPASIATLPSITNLILCHNHLTGGIPSFPDSSPLIRLDLKHNDLSGGVPNLPSTLQYLSLSANRLTGTVDSVLPRLTRLNYLDLSMNQLDGPIPASVFTLPLSVLQLQRNFFSGLLQPANDVTIQVVDLSYNRFWGPVSPLLAGVGQLYLNNNRFTGEVPARLVQELVGSGGLQVLYLQHNFLTGIEISPASSLPSSVSLCLMYNCMVPPVYAPCPLKAGSTNTRPADQCPEWRG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.405645 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0406800 | RBH | 0.0 | 0.0 | 0.465896 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g33690 | RBH | 0.0 | 0.0 | 0.150211 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0406800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0016810 | RBH | 0.0 | 2.152694 | 2.689203 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0016810 | RBH | 0.0 | 1.295669 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0016610 | RBH | 0.0 | 7.956137 | 0.857226 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0016250 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0016840 | RBH | 0.0 | 17.713938 | 1.372986 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0304600 | RBH | 8.532472 | 2.93153 | 6.7466855 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0016340 | RBH | 0.0 | 0.714814 | 0.101855 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0314400 | RBH | 10.8978885 | 0.8538015 | 27.658016 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0016660 | RBH | 0.0 | 0.160108 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0016580 | RBH | 0.0 | 7.232416 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0016690 | RBH | 0.0 | 8.712678 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0016710 | RBH | 0.0 | 0.696677 | 0.277360 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0016770 | RBH | 0.0 | 7.766045 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G016240 | RBH | 0.0 | 4.599581 | 1.511711 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0016550 | RBH | 0.0 | 10.046953 | 0.707554 |
