Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_04g0000040 | OGI:04000280 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr04:56275-58245 | ||||||||
| Gene Symbol | CYP93G1, OsCYP93G1, OsFNSII, FNSII, - | ||||||||||
| DNA seq | TTAGGAGCCAAATGTCTAAATAGGTGGTACATTTAATTAGGAGTACTGTGGAAGGCGTATCCTGTGGTTCGTTGACTAATATAATCTGCCCGTGCTGTGACGACTGTCAACAATATACTAATTTGCTAGTAGCTCTGAAATCTGTCCCATCTGTATCACAATCAAGCTTGCTTGGAATATTTGATTTGAGAGACATGCAATAGGTCTAGGTAGGGAATACATACACATTAATTATTACAATATAGTAAAGTGGTAATTAATTTATAATGGTTGTATTACGGTGCTTTACAGGGACAGGAAAGGAGTAGGAGTGGTAGGTAGGTAGGGGTAGCTAGAGGAGCGGCGGGAAAGGGTGGAGGCGCGGGTGGGCGTGGAGGAGGAGGCGATGCTTCCGAGCGCAAACCAGGCCGTCTGCCTCCTCCATGTCTATCAACTTATTGTCCATGCACTGCCAATCGAAGCACTGCAGCAGCGCCGCCACCACCGCCGGCACCGACTGCAGCGCAAGCCCCATCCCGGGGCACCCGCGCCGGCCGCTCCCGAACGGCATGAACTGGAAGTGCTGCCCGCGCGGCTCCACGCCCTCGCCGCCGCCGCCGGCGAGGAACCGCTCCGGCCTGAACTCCAGCGGCTCCTCCCAGTACGCCGGGTCTCGCCCGATGGCCCACACGTTGATGAACACCGCCGTCTGCGCCGGCACCCTGAACCCTCGGATCTGGATCTCCTCCGTCGACTGCCTGTGCGCGATCGGCGCCGCCGGCCTCAGCCGCAGCGTCTCCTTGTACGCCGCCTGCAGATACGGCAGTCTCGGCAGGTCCCCCTCGCCGGCGATCCTGTCCCGCCCCACCACCGCCTCGATCTCCTCCCGCACCTTGCGCAGGGCCTCCGGGTGGTTCATCAGCTCCGCCACCATCCACTCCACCATGGCGGCCGAAGTGTCGGACCCGGCAGTAACAACGTCCTGATCGATCGAGTGCATCATATCCATGCATCATCTTAGTACTCCACTCCACTAGCTAATTAAGAAAGAAAGAAAGAAAAAAGTGCGTGCTGGCTTACGATGATGAAGGCCTTGATGTTGTCTCTGGTGAGCTTCACCTCCGCCGCGCCGTCCTCCGCCTTGTCCAGCAGGATGTCAAGCAGGTCCTTGCTGCCGACGTCTGTGTCTGTCTTCTTCCGCATCCTAGCCTCCTCCTTGTGCCTGATCATCTCCTCCAGCAGCGCGTCGAACCTCTTGTGCACGTCGGCCGCACGGCGCCCGAGGCCCTGCAGGTCCCAGCCACGGCACAGGGCGATGTAGTCGTCGGCGTTGAAGGCGCCCACCAGCTCCGCCACCACCTTCACCAGCTCCTGCGCCTCCTCCGTCACGCTGCCGGGGACCGTGCTGGCGGCCATGCGGATGATGGAGGTGTTGGACATGCGGATGAGCTCGCGGGTCAGGTCCACCGCCTCCGCCTCCGGCTGCGACAACACGTGGCGCAACAGCGACACCAGCCCGGCGCGGCGCACGGGGCGCAGCTGCTCCACCGTGCGCGGGCCCAGCAGCTCCGACATGCACAGCCGCTTCATGAAGCGCCAGTGCGGGCTGTAGGGCGCGAACGCGAACCCCGCCGACTCGTACGCGAACTGCCGGGCCACCGCCGTCAGCGGCCGCTCCGATATCTTCGCCTCGTGGCTGCGGATCAGCTCCGCCGCCACCTCCGCCGAGCTCGCCACAACGCAGTGCGTCGACCCCAGCCGGACGTGCATCAGGGGGCCCAGCCTCGCCGCCAGCTCGTGGAAGGTGCGGTGCACCGGCGGCCGGAGCAGGTGAAGGTGCCCGATCACCGGTAGGCTCGCCGGACTCGGGGGAAGCCGCCGCCGCCCAAAGGCGTTCACGGCAACGTGCACAACCACAACGACGACGAGAGCCAGAGCCAGGGCGCCCATCGTAGTGCCCATTCCCAACAGCGGCACCAGCACTTCCATCAA
More
|
||||||||||
| CDS seq | ATGGAAGTGCTGGTGCCGCTGTTGGGAATGGGCACTACGATGGGCGCCCTGGCTCTGGCTCTCGTCGTCGTTGTGGTTGTGCACGTTGCCGTGAACGCCTTTGGGCGGCGGCGGCTTCCCCCGAGTCCGGCGAGCCTACCGGTGATCGGGCACCTTCACCTGCTCCGGCCGCCGGTGCACCGCACCTTCCACGAGCTGGCGGCGAGGCTGGGCCCCCTGATGCACGTCCGGCTGGGGTCGACGCACTGCGTTGTGGCGAGCTCGGCGGAGGTGGCGGCGGAGCTGATCCGCAGCCACGAGGCGAAGATATCGGAGCGGCCGCTGACGGCGGTGGCCCGGCAGTTCGCGTACGAGTCGGCGGGGTTCGCGTTCGCGCCCTACAGCCCGCACTGGCGCTTCATGAAGCGGCTGTGCATGTCGGAGCTGCTGGGCCCGCGCACGGTGGAGCAGCTGCGCCCCGTGCGCCGCGCCGGGCTGGTGTCGCTGTTGCGCCACGTGTTGTCGCAGCCGGAGGCGGAGGCGGTGGACCTGACCCGCGAGCTCATCCGCATGTCCAACACCTCCATCATCCGCATGGCCGCCAGCACGGTCCCCGGCAGCGTGACGGAGGAGGCGCAGGAGCTGGTGAAGGTGGTGGCGGAGCTGGTGGGCGCCTTCAACGCCGACGACTACATCGCCCTGTGCCGTGGCTGGGACCTGCAGGGCCTCGGGCGCCGTGCGGCCGACGTGCACAAGAGGTTCGACGCGCTGCTGGAGGAGATGATCAGGCACAAGGAGGAGGCTAGGATGCGGAAGAAGACAGACACAGACGTCGGCAGCAAGGACCTGCTTGACATCCTGCTGGACAAGGCGGAGGACGGCGCGGCGGAGGTGAAGCTCACCAGAGACAACATCAAGGCCTTCATCATCGACGTTGTTACTGCCGGGTCCGACACTTCGGCCGCCATGGTGGAGTGGATGGTGGCGGAGCTGATGAACCACCCGGAGGCCCTGCGCAAGGTGCGGGAGGAGATCGAGGCGGTGGTGGGGCGGGACAGGATCGCCGGCGAGGGGGACCTGCCGAGACTGCCGTATCTGCAGGCGGCGTACAAGGAGACGCTGCGGCTGAGGCCGGCGGCGCCGATCGCGCACAGGCAGTCGACGGAGGAGATCCAGATCCGAGGGTTCAGGGTGCCGGCGCAGACGGCGGTGTTCATCAACGTGTGGGCCATCGGGCGAGACCCGGCGTACTGGGAGGAGCCGCTGGAGTTCAGGCCGGAGCGGTTCCTCGCCGGCGGCGGCGGCGAGGGCGTGGAGCCGCGCGGGCAGCACTTCCAGTTCATGCCGTTCGGGAGCGGCCGGCGCGGGTGCCCCGGGATGGGGCTTGCGCTGCAGTCGGTGCCGGCGGTGGTGGCGGCGCTGCTGCAGTGCTTCGATTGGCAGTGCATGGACAATAAGTTGATAGACATGGAGGAGGCAGACGGCCTGGTTTGCGCTCGGAAGCATCGCCTCCTCCTCCACGCCCACCCGCGCCTCCACCCTTTCCCGCCGCTCCTCTAG
More
|
||||||||||
| Protein seq | MEVLVPLLGMGTTMGALALALVVVVVVHVAVNAFGRRRLPPSPASLPVIGHLHLLRPPVHRTFHELAARLGPLMHVRLGSTHCVVASSAEVAAELIRSHEAKISERPLTAVARQFAYESAGFAFAPYSPHWRFMKRLCMSELLGPRTVEQLRPVRRAGLVSLLRHVLSQPEAEAVDLTRELIRMSNTSIIRMAASTVPGSVTEEAQELVKVVAELVGAFNADDYIALCRGWDLQGLGRRAADVHKRFDALLEEMIRHKEEARMRKKTDTDVGSKDLLDILLDKAEDGAAEVKLTRDNIKAFIIDVVTAGSDTSAAMVEWMVAELMNHPEALRKVREEIEAVVGRDRIAGEGDLPRLPYLQAAYKETLRLRPAAPIAHRQSTEEIQIRGFRVPAQTAVFINVWAIGRDPAYWEEPLEFRPERFLAGGGGEGVEPRGQHFQFMPFGSGRRGCPGMGLALQSVPAVVAALLQCFDWQCMDNKLIDMEEADGLVCARKHRLLLHAHPRLHPFPPLL |
||||||||||
| Function | Cytochrome P450 93G1 [UniProtKB/Swiss-Prot:Q0JFI2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_04g0000040 | OsARC_04g0000040.01 | Chr04 | 56275 | 58245 | - | NAM | ||
| CDS seq | ATGGAAGTGCTGGTGCCGCTGTTGGGAATGGGCACTACGATGGGCGCCCTGGCTCTGGCTCTCGTCGTCGTTGTGGTTGTGCACGTTGCCGTGAACGCCTTTGGGCGGCGGCGGCTTCCCCCGAGTCCGGCGAGCCTACCGGTGATCGGGCACCTTCACCTGCTCCGGCCGCCGGTGCACCGCACCTTCCACGAGCTGGCGGCGAGGCTGGGCCCCCTGATGCACGTCCGGCTGGGGTCGACGCACTGCGTTGTGGCGAGCTCGGCGGAGGTGGCGGCGGAGCTGATCCGCAGCCACGAGGCGAAGATATCGGAGCGGCCGCTGACGGCGGTGGCCCGGCAGTTCGCGTACGAGTCGGCGGGGTTCGCGTTCGCGCCCTACAGCCCGCACTGGCGCTTCATGAAGCGGCTGTGCATGTCGGAGCTGCTGGGCCCGCGCACGGTGGAGCAGCTGCGCCCCGTGCGCCGCGCCGGGCTGGTGTCGCTGTTGCGCCACGTGTTGTCGCAGCCGGAGGCGGAGGCGGTGGACCTGACCCGCGAGCTCATCCGCATGTCCAACACCTCCATCATCCGCATGGCCGCCAGCACGGTCCCCGGCAGCGTGACGGAGGAGGCGCAGGAGCTGGTGAAGGTGGTGGCGGAGCTGGTGGGCGCCTTCAACGCCGACGACTACATCGCCCTGTGCCGTGGCTGGGACCTGCAGGGCCTCGGGCGCCGTGCGGCCGACGTGCACAAGAGGTTCGACGCGCTGCTGGAGGAGATGATCAGGCACAAGGAGGAGGCTAGGATGCGGAAGAAGACAGACACAGACGTCGGCAGCAAGGACCTGCTTGACATCCTGCTGGACAAGGCGGAGGACGGCGCGGCGGAGGTGAAGCTCACCAGAGACAACATCAAGGCCTTCATCATCGACGTTGTTACTGCCGGGTCCGACACTTCGGCCGCCATGGTGGAGTGGATGGTGGCGGAGCTGATGAACCACCCGGAGGCCCTGCGCAAGGTGCGGGAGGAGATCGAGGCGGTGGTGGGGCGGGACAGGATCGCCGGCGAGGGGGACCTGCCGAGACTGCCGTATCTGCAGGCGGCGTACAAGGAGACGCTGCGGCTGAGGCCGGCGGCGCCGATCGCGCACAGGCAGTCGACGGAGGAGATCCAGATCCGAGGGTTCAGGGTGCCGGCGCAGACGGCGGTGTTCATCAACGTGTGGGCCATCGGGCGAGACCCGGCGTACTGGGAGGAGCCGCTGGAGTTCAGGCCGGAGCGGTTCCTCGCCGGCGGCGGCGGCGAGGGCGTGGAGCCGCGCGGGCAGCACTTCCAGTTCATGCCGTTCGGGAGCGGCCGGCGCGGGTGCCCCGGGATGGGGCTTGCGCTGCAGTCGGTGCCGGCGGTGGTGGCGGCGCTGCTGCAGTGCTTCGATTGGCAGTGCATGGACAATAAGTTGATAGACATGGAGGAGGCAGACGGCCTGGTTTGCGCTCGGAAGCATCGCCTCCTCCTCCACGCCCACCCGCGCCTCCACCCTTTCCCGCCGCTCCTCTAG
More
|
|||||||
| Protein seq | MEVLVPLLGMGTTMGALALALVVVVVVHVAVNAFGRRRLPPSPASLPVIGHLHLLRPPVHRTFHELAARLGPLMHVRLGSTHCVVASSAEVAAELIRSHEAKISERPLTAVARQFAYESAGFAFAPYSPHWRFMKRLCMSELLGPRTVEQLRPVRRAGLVSLLRHVLSQPEAEAVDLTRELIRMSNTSIIRMAASTVPGSVTEEAQELVKVVAELVGAFNADDYIALCRGWDLQGLGRRAADVHKRFDALLEEMIRHKEEARMRKKTDTDVGSKDLLDILLDKAEDGAAEVKLTRDNIKAFIIDVVTAGSDTSAAMVEWMVAELMNHPEALRKVREEIEAVVGRDRIAGEGDLPRLPYLQAAYKETLRLRPAAPIAHRQSTEEIQIRGFRVPAQTAVFINVWAIGRDPAYWEEPLEFRPERFLAGGGGEGVEPRGQHFQFMPFGSGRRGCPGMGLALQSVPAVVAALLQCFDWQCMDNKLIDMEEADGLVCARKHRLLLHAHPRLHPFPPLL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.038075 | 0.472292 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0101400 | RBH | 0.702714 | 0.552546 | 8.907412 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g01140 | RBH | 0.427887 | 0.334624 | 2.064598 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0101400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0000040 | RBH | 0.0 | 15.115585 | 14.187345 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0000050 | RBH | 0.0 | 2.847241 | 2.495221 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0000040 | RBH | 0.448984 | 7.652318 | 9.280206 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0000030 | RBH | 1.987220 | 16.470022 | 50.818127 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0001800 | RBH | 12.606705 | 2.308243 | 0.1398675 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0000050 | RBH | 0.000000 | 0.637567 | 2.203196 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0001700 | RBH | 11.0167315 | 0.352452 | 0.6317825 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0000050 | RBH | 0.0 | 0.108522 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0000070 | RBH | 0.067708 | 1.498535 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0000060 | RBH | 0.0 | 15.012373 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0000040 | RBH | 0.242723 | 0.0 | 3.927205 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0000040 | RBH | 0.185679 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G000070 | RBH | 0.000000 | 4.009514 | 4.394890 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0000020 | RBH | 0.000000 | 6.307551 | 20.746721 |
