Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_03g0005990 | OGI:03011310 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr03:4267452-4272517 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TCTGACAGAAAATGAGAATAGTATATTGTAGCGGTTCTTGCAGGCTAACATATATAGAATCTGATGTTTTACATCCTTGAATTCATTCCCCAGACATTGTGTTGGATCTGGAGATATAGACACCCCCGGTGGCAGTAAAGAGGCAACAAGAACAATTTCCTGGATTTTTTTTTCTTTTCTTGAGAGAGGAGACTAGCGTTTCTTTTTTGTACGACCGTACTTCAGTACATGTACATGTCTGTTTACAAAACGTGTTGTCAACTTCTATTACAAAAAAGGGTTTCCCTTTTGCTTACCAAATAAAATATCAAAGGAGATTCGAGTCAGGTCCTATATCAAACTAAAGGGTCAGTTCTAGTTGTCATACATCCTGCCTTGGTGTAAGCAAACAAAAATATGATATGGTCTCTCCCCAACCTTCAAATGTACATATGCCATATGCTCACTCAAGTGCACAGTGCGCCTATAATCTCTGGAATGAACAGATGTTCAAGCAAGCTGTAACAAATACATGATTTGCCTACCTGTCGAATGTTATCATGCATTTCAACCTATGACCTGCAATTTGAGAAAGGGAAGGTAAGGCTTATAATCTATGGAATGCTGTCATGCATTTCAACCTATGACCTGCAACTGCAAATTTCCTTACGAAAGAAATTGGTAAGGCATACTCAGGTGACTGTAATGACCATATTTAGTCATTTAGGTTCAAGATCCGACCTGGTTCACCAAGGGGAGTGCATAACGTTCCCATTCTGTCGACCATTTGGAAGATGACCCAGTATTCAAGGCACCAACCTTGAGGGATTTCAAGTCATCGCATTCTTCCGGAAACCCCTTAAAGAGCATCTGCATGGATTTGCGATTGCAACAATTAAAATCTAGACACAGCACTTTCAACAAGTATTTAAAAAAAAGATATGAACATAAAATATGGAAATAAATAATTAAAAGTGATCATCACCATAAGTTCATCGGCAAGCTCAGAAGATGTTGAAAAAAGAAGTCCATTATTATTTATTTTTACAAGCTCATCAATGCTGCACATACGAAAAAAAAATTAGGACATACTTTTAATTCAAACGACATGAAGGTCAAAGCCCAAATGTAACAAATCAAACATACGGGAAACATGGATTACCAGGAGAATGAAGCAGCACAAACTGGTAATCCACAACCGAACATATCAACCACCTAAAAGCAAAATCGTCAAGTTACACGCAACAGATAAAAAATGCCTATTTTTTCAACAGAGCGGATGCTTATGAGTTATACCTTCATAGGTAGGTCTAGCCCTGAAGAGGAAGTATGCAATGATACACCTAGATCAGCCGATCCTGTAATTATTCAAAGAATCAGCATTTATGCTACAACATGGAATTCTTTTGGCAATCAACTAGTTTACCAAGCAAAAGAGGGTAGTCCTCTGATGCAAGCCACATAGTCCGGAAGGCAACACGCCTCAGTTTCAACCTCTTTATTTGCTCCTCATACTTCATCCTATCAGGTCCTTTGCCTTCAAAATTGATATTCATGGATATCATAACAATACTCAAAAACTGGTTACTGGAGCTAATTAGCAGAATGCACAAACCAGTGATAATGAATAGCAGTCTTGGGTAGACAAATTGCTTCCCGTTCTTGATATCAATCCAAAGCTTTCCCTCGTCCATTGAATCATCTTCTCCTAAAGTTGCAGCAACACGTCTATCGTACATAAGTGCTGCTTCCAGAAGTATGCTGAAATCTTCATCTGGTGTCCTGAAATATGTGGCAAAGGAAAAGATTCTTAATTTTACTTTCATTTTAACCACATGTGCTGAGTATAAATAATGATACAACTAGGATCACCCAGATCAAGAGAACAGACCAGCTTGTGCTGCTGACAACAAGAGCTGGTCTATTAGGCTTCAAGAAAATTTCACCATCGACCCAGCTTGTAAATACAGTAGTGTTCCTGTCTTCCACTTCTTTCTCTGTGTTGTAAGAGCAAACAGTAGAAACTATATCAAAGTGAAATTTTCTTACAGCAATCAAATATTTAGAGTGGCTGGAGAACATACCAACAGAAATGCAATCGTCATTGCCCATAGCACTACAAATGGAATTCCCCAACCTGCTAAACAACTATTTCATCTAATGGTCAGATAGGCAGTACAGCAAAGATGAGGAAATAAATGAAAACAGATGCTCACCTCATGTTTCTCTGTCAATGAAGCAGGATGGAAAAATTCAGGAGATTGATCGTAAAGAACTGTTGCGCTGAAATCCAACCAGTTAAGTTAATATAAACTGTAGCTAGCGACTTCAAAAATAAAAGTAGTTGTGTGCTAACACAACAGCCTTAAACATGAAAAGTGCCTGAAAGTTTGATCTTACTTGATTCCCCATTTTTGATCAAGCTCGTGTTTCATTGCTTTTGTAACACAGAAGGCACCATCAGCCATCCGTCCAAAATGCTTCTCGAACCTAGAATGCAAAGAACACACCACTATATTAACACACACAATCAGTATGCTACATCTAGCAGATAAACAAACAGGACAGGAATTACCAGAAGTAGATTTTAACAATGATATGGCTTCTGCCATGAGACAACCCAAGCAGTGTATATCCAAAGTTATGCCAGTCCACAATAAACTTAGCACCTCTTAGCCAGCTAGCCAGTTTTACAGCAGCCAATGTTGGAACAGAGGGTGGATTCTGTTGGACAGAAGATGATCGAATAAAAGAATCAGTTCCATGCTAGTGTGTGAGATTTTCGAATTAACAAATAAATTGTAAGTATCAAATAGAAGGATTTCTAGGTAATAAAAGTCTATGTCAGTTAGTAAGGCCAAAAGATACTATACAAAATGACAAAACTTCGCCTAAGTAAAGGCTGCACTTATCATAGCTGAAATTTTGAATTGAAAATGGTGTAATGAATAGGTACTGCATAAGTATAAGTCTACAGCATGACTTGCTAATTAAGCTGTGCAATACTTTGGTAAGACCATGGATTTACTAGCGTGATTGATAGATGATGAACTATAGAAGAATTCCACACTATTGACTGATAGTAATTGCAGAAAACTATAAATTGTCCATGTAATTCTGAACCATGCATGCGACTAAAGAAGCTCAATGCAATTTTGTGAAAACTGACCTGAACAATGAAGACATCAGGGCGAGGAATCTTGAAACAAAGGTACCAAATCAATATGATAAACTGGATGGCAGCTTTAAGTAGCAGTGTCAGGGCACCGGATATCTTTAATATTCCTGTTAACTGCACTGATTTCTAGAAGGTACAATTCAAAAGTTAATAGTACACAAAATTAGAGAACAGCGTAATGCTTTCAAACAATCAGTACCATTTCATGGATGTGAATTGATGGATTTTCTCTCAATAATAGATGCGGGTCACTTCCTGCTCATTTACCCAAAGCAGAACATAGGTCAAATTTCAACAAAAGACGCAACAGAAGGTCGAAAGTTGTTGGAAACTCAGCCTGTATGATGTGCACTAAGTGGAAGGTATAAATGAATAAAATCCAAAAGTACAATGAAACTGCAAAAAGAATAATACCTCCATTTGCAACAATGTCCACTTCCATACCAGCCTGTCAAGAAAAATAAAGAATGACTAATTAACTAAAACATAGAGACATATGCACATAGAGTTGGTTCTTCCCAACACATAGCATGTCCCAATATCACAATTTTTTTGCCACTTGAAGAAAATATATATGCTTAGTAAATGCAAGGCAATTTTCTTCTCTTCATTTCAAAACCTGTCTTATCTAACAGGACTAATATTTGCACGTGTAATCACACTTTCAGGGAGAAAAAAAAGACACATTTTTAAGGGAGAACCAAAAATCAAGGGCATTAATCAACCCGAAGCTATGTCCGCTCACGCTTTCAGGGGGTGCAAATGACCACCACTGCATTAGTTACTTCATCTGTGCAATCGCACAACTGACACACACCACATCTCCTTTCTTTACTAGTTATTACCCTGCTATCTAACCGAGGACCATATGCTACACTAGAGAAGTGATGAATTAAGTGCAAAATTCATGAAGGAATATTAACTATCACAGCACATCGAAATACACCTACAGCTAGCTGGAGGGACTAAGCTTTCCCAATCAAAACAAAACAGAACTAATATGAGATGATGGGTTTGGGAAGGGGATCAATACCTGGTTGGCGAGGGAGAGGGAGTGGTACTGCATGCGCGGGCTGCGCCCAATGTCTCCCAGAACTACCACCGCCGCTCGCTTCCTCCTCCCTGCCTCTAGTGCCACGGCCATTGCCTACTAGCCTTCCGAGTTTGGAAATTTCAGATTCAACCGCCACCAAGAAGTGAGGTTCCTGAAAAGGCATTTAATTTAGCTAGGTATTAGCTCCAAACATCCAGGAAGGGAGGAGTAGATAAAAAATGGACAACGGTTCTCTTGGTTATTTTTCTGTTCACCGCATTTATGCTCAATTAGAGAATACGTCTGTACTATTTTACATCAATACAACAATGTTCTGTTGACGGAACAAGAATGTAGGGATGCAATATATGCTAGTGAGTTTATACTCATGTAAATTAATTCGTTGTTTCGCATATTGTTGAACGCAACTGGAGATTCATTAGTTTGTACGAATGATTGGCAACCAACACTCGGATAGTATCGGTACTGTGTATTCCACAGTTCTACAAGTAGCAAAGGGGACTAGTCCTAATCATCAGCAATCGCTTAGGAACATACATGAATTTCATTGTCCTAAAGTCAAGTCAGGTTGTTCTGACATTGATCTGGAATGGGCAAAATCGAGCGGAAGAGGGGCGAGTTTCTAGGGTTGGGGTGGGTGGGCATACCTGCTCCGCCGCCGCACTTCGGGTGCGTGGGGGAGAGCGGCGCCGCCTGCTTCCCCACCCGTGCGCTGGATCCGATCGCCGTGCGAGGGGAGGGGGATACAGGGGGGGACGCCGGACGACGGGACGATTCCTCCGGCTGCCTCCGACGGGCGACGGCTCGTCTTCTTGCTCCTCCCCGAGGAGTCCAACCACCGCGACTCTCGTCCTT
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| CDS seq | ATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGGTGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCGCCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTATTATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAATATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATATTGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTTCATTGTTCAGAATCCACCCTCTGTTCCAACATTGGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTATTGTGGACTGGCATAACTTTGGATATACACTGCTTGGGTTGTCTCATGGCAGAAGCCATATCATTGTTAAAATCTACTTCTGGTTCGAGAAGCATTTTGGACGGATGGCTGATGGTGCCTTCTGTGTTACAAAAGCAATGAAACACGAGCTTGATCAAAAATGGGGAATCAACGCAACAGTTCTTTACGATCAATCTCCTGAATTTTTCCATCCTGCTTCATTGACAGAGAAACATGAGTTGTTTAGCAGGTTGGGGAATTCCATTTGTAGTGCTATGGGCAATGACGATTGCATTTCTGTTGAGAAAGAAGTGGAAGACAGGAACACTACTGTATTTACAAGCTGGGTCGATGGTGAAATTTTCTTGAAGCCTAATAGACCAGCTCTTGTTGTCAGCAGCACAAGCTGGACACCAGATGAAGATTTCAGCATACTTCTGGAAGCAGCACTTATGTACGATAGACGTGTTGCTGCAACTTTAGGAGAAGATGATTCAATGGACGAGGGAAAGCTTTGGATTGATATCAAGAACGGGAAGCAATTTGTCTACCCAAGACTGCTATTCATTATCACTGGCAAAGGACCTGATAGGATGAAGTATGAGGAGCAAATAAAGAGGTTGAAACTGAGGCGTGTTGCCTTCCGGACTATGTGGCTTGCATCAGAGGACTACCCTCTTTTGCTTGGATCGGCTGATCTAGGTGTATCATTGCATACTTCCTCTTCAGGGCTAGACCTACCTATGAAGGTGGTTGATATGTTCGGTTGTGGATTACCAGTTTGTGCTGCTTCATTCTCCTGCATTGATGAGCTTGTAAAAATAAATAATAATGGACTTCTTTTTTCAACATCTTCTGAGCTTGCCGATGAACTTATGATGCTCTTTAAGGGGTTTCCGGAAGAATGCGATGACTTGAAATCCCTCAAGGTTGGTGCCTTGAATACTGGGTCATCTTCCAAATGGTCGACAGAATGGGAACGTTATGCACTCCCCTTGGTGAACCAGGTCATAGGTTGA
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| Protein seq | MAVALEAGRRKRAAVVVLGDIGRSPRMQYHSLSLANQAGMEVDIVANGGSDPHLLLRENPSIHIHEMKSVQLTGILKISGALTLLLKAAIQFIILIWYLCFKIPRPDVFIVQNPPSVPTLAAVKLASWLRGAKFIVDWHNFGYTLLGLSHGRSHIIVKIYFWFEKHFGRMADGAFCVTKAMKHELDQKWGINATVLYDQSPEFFHPASLTEKHELFSRLGNSICSAMGNDDCISVEKEVEDRNTTVFTSWVDGEIFLKPNRPALVVSSTSWTPDEDFSILLEAALMYDRRVAATLGEDDSMDEGKLWIDIKNGKQFVYPRLLFIITGKGPDRMKYEEQIKRLKLRRVAFRTMWLASEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAASFSCIDELVKINNNGLLFSTSSELADELMMLFKGFPEECDDLKSLKVGALNTGSSSKWSTEWERYALPLVNQVIG |
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| Function | UDP-glycosyltransferase TURAN [UniProtKB/Swiss-Prot:Q8L7M0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_03g0005990 | OsARC_03g0005990.01 | Chr03 | 4267452 | 4272517 | - | NAM | ||
| CDS seq | ATGGCCGTGGCACTAGAGGCAGGGAGGAGGAAGCGAGCGGCGGTGGTAGTTCTGGGAGACATTGGGCGCAGCCCGCGCATGCAGTACCACTCCCTCTCCCTCGCCAACCAGGCTGGTATGGAAGTGGACATTGTTGCAAATGGAGGAAGTGACCCGCATCTATTATTGAGAGAAAATCCATCAATTCACATCCATGAAATGAAATCAGTGCAGTTAACAGGAATATTAAAGATATCCGGTGCCCTGACACTGCTACTTAAAGCTGCCATCCAGTTTATCATATTGATTTGGTACCTTTGTTTCAAGATTCCTCGCCCTGATGTCTTCATTGTTCAGAATCCACCCTCTGTTCCAACATTGGCTGCTGTAAAACTGGCTAGCTGGCTAAGAGGTGCTAAGTTTATTGTGGACTGGCATAACTTTGGATATACACTGCTTGGGTTGTCTCATGGCAGAAGCCATATCATTGTTAAAATCTACTTCTGGTTCGAGAAGCATTTTGGACGGATGGCTGATGGTGCCTTCTGTGTTACAAAAGCAATGAAACACGAGCTTGATCAAAAATGGGGAATCAACGCAACAGTTCTTTACGATCAATCTCCTGAATTTTTCCATCCTGCTTCATTGACAGAGAAACATGAGTTGTTTAGCAGGTTGGGGAATTCCATTTGTAGTGCTATGGGCAATGACGATTGCATTTCTGTTGAGAAAGAAGTGGAAGACAGGAACACTACTGTATTTACAAGCTGGGTCGATGGTGAAATTTTCTTGAAGCCTAATAGACCAGCTCTTGTTGTCAGCAGCACAAGCTGGACACCAGATGAAGATTTCAGCATACTTCTGGAAGCAGCACTTATGTACGATAGACGTGTTGCTGCAACTTTAGGAGAAGATGATTCAATGGACGAGGGAAAGCTTTGGATTGATATCAAGAACGGGAAGCAATTTGTCTACCCAAGACTGCTATTCATTATCACTGGCAAAGGACCTGATAGGATGAAGTATGAGGAGCAAATAAAGAGGTTGAAACTGAGGCGTGTTGCCTTCCGGACTATGTGGCTTGCATCAGAGGACTACCCTCTTTTGCTTGGATCGGCTGATCTAGGTGTATCATTGCATACTTCCTCTTCAGGGCTAGACCTACCTATGAAGGTGGTTGATATGTTCGGTTGTGGATTACCAGTTTGTGCTGCTTCATTCTCCTGCATTGATGAGCTTGTAAAAATAAATAATAATGGACTTCTTTTTTCAACATCTTCTGAGCTTGCCGATGAACTTATGATGCTCTTTAAGGGGTTTCCGGAAGAATGCGATGACTTGAAATCCCTCAAGGTTGGTGCCTTGAATACTGGGTCATCTTCCAAATGGTCGACAGAATGGGAACGTTATGCACTCCCCTTGGTGAACCAGGTCATAGGTTGA
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| Protein seq | MAVALEAGRRKRAAVVVLGDIGRSPRMQYHSLSLANQAGMEVDIVANGGSDPHLLLRENPSIHIHEMKSVQLTGILKISGALTLLLKAAIQFIILIWYLCFKIPRPDVFIVQNPPSVPTLAAVKLASWLRGAKFIVDWHNFGYTLLGLSHGRSHIIVKIYFWFEKHFGRMADGAFCVTKAMKHELDQKWGINATVLYDQSPEFFHPASLTEKHELFSRLGNSICSAMGNDDCISVEKEVEDRNTTVFTSWVDGEIFLKPNRPALVVSSTSWTPDEDFSILLEAALMYDRRVAATLGEDDSMDEGKLWIDIKNGKQFVYPRLLFIITGKGPDRMKYEEQIKRLKLRRVAFRTMWLASEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAASFSCIDELVKINNNGLLFSTSSELADELMMLFKGFPEECDDLKSLKVGALNTGSSSKWSTEWERYALPLVNQVIG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.063758 | 0.355146 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0180700 | RBH | 0.901968 | 1.061391 | 3.119580 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g08300 | RBH | 0.613199 | 0.701103 | 0.790091 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0180700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0006020 | RBH | 0.524961 | 2.626472 | 4.571321 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0005980 | RBH | 0.173809 | 1.584960 | 1.223635 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0006000 | RBH | 1.219741 | 14.356124 | 7.598284 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0019470 | RBH | 0.038857 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0005950 | RBH | 3.484233 | 14.537695 | 7.616705 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0069000 | RBH | 3.4830635 | 8.606502 | 13.2365835 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0005850 | RBH | 0.152860 | 0.502625 | 0.700797 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0069300 | RBH | 4.1966205 | 7.4168965 | 12.1089435 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0005910 | RBH | 0.189303 | 0.054460 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0005930 | RBH | 0.049901 | 1.361548 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0005910 | RBH | 1.039119 | 5.683387 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0005930 | RBH | 0.896615 | 0.892971 | 0.733505 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0005930 | RBH | 0.337469 | 2.235227 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G005950 | RBH | 0.168003 | 2.126660 | 0.897604 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0005770 | RBH | 1.061218 | 8.872674 | 3.872197 |
