Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0038300 | OGI:02098620 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:35018915-35025152 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAGACTTCGTTGATGTTTTGGAGAAACTCTAGCCCAGAAAAGCCAATTTCATTTTCTACTCGCCCTTGGACCTGCAGCCGCTCAAGTTTGAGCATTGTTCCTTCCTCAAACTTGACTGATTTGATGCCCCACACTTCTGCAAGCTTGAGCACCCTGAGGCTTACAAAAGCAGCCCCAGTCTGCGTTGGCTTGAAATGAAATTCTTCACCCTTAAACGGTgcaatcactagaatttccagcttcgctagttccccaaggaattccatagcaacatcgtgctccaatagcctagcgcccactagtttcaacttcacgagatgctggaggcccttgatccatcccggcaacgttatcagattgccgtacagcttgaggctctgcaggttttccggaggcgaggatatatcatccaagcagccacAcaaacccGgcatccctgctgaactcacagacagtgattccagcttgctgaggttggaaatggccaagtgaaacgctcgtccattcttcttgttgatgccagccactcctaacttgtgtaatcccgtgagcattctgatgtctcgtagaacagcatttccgcttccgacattcacgtcccttagtgtgtgcaagtctttcagttttctgatcccctttggcaccatagtgccattttctttatgtactcccttatggggagggccatcaatgccccaaagaagaggtaggcaacatgttgcacacagacaccctgccacacaacAcctcttcattaaactatccttttcctcccatacatagtctgttttgcgcccaatatggatgtactgtagcttcttaagcttgatgatggtttttGgcaaagccTttacatatgtacctctgatgtctagcatttggagttgtctCaggttgcccaataaatctggcagtagatcaatatcaatgcatcctcgtagagaaaggaattttaggtgaataagcttccaaatctgatcaaggtgatgatattttagacctctagtcctttcaaagtcgagcactCgtataaacttcatcttgctagaaacgaaaaatggctcccaatgcccaaacagagatagggatcgtatttgggacaggtccActatgCcctcgaattcactcttatctcccttCcagttgctaCttatagcaagatgacgaattgcaccatgtatgtacgcgcTGaagccttcctccatcctaaaaacaaGgttttcctctgttgactttgagatggcaatgtcacgaatgagatcatggactttgcaagagtcaattgatttcctgctgGAGCTGATTGCTGGGATGGTAAAATCATGCTTCTATTCTTGAGTTCCATGAAGTAGCCGTTAGCTATTTCAATGGCAGATTTCCCATGTGCTGCAGTTGAGTAACCTTCTGCTGCCCAACGATGCACCAAACGCCTTCGACTAATGATCTGGTCTTCAGGGAAAATGGACAGATATAAAAAACATGACTTGAGATGGTATGGTAAACCATCATAGCTTTTTTCAAGGACGGTTCTTATCATTCCAAGCTCTGGATTCATTTCCAACTCAGCATTGATATTCTCGTTCAATTTTCTCCACTCTTCTGGGGTCTTTGGTCGGTTTGCCAAGAATCCACCTATGACAACTATTGCAAGGGGCAGTCCATCGCACTTCTTTAGGATTTGTTTTGCTTCTTTAACCAACTCTGGATTGTTCTGATCATCCAAATATGTAGCCTCCTCAAATACCTAACATTGATACAATTTAAGCTTTATTGTGCTCTAAAGTAAAACAAAAAAAATTAAAtttagaaatacgtctactattaaaactaaggaatgaaggccaccattacatacaaaaacaaagtcacatctaacgtccatccaatgcaggtcattttaggaactgcattgctattgttgtgagaacagattaagttgtatatgaatctagtatatgctatttctgcatgcacaattatcatcttgattggattactcaaatgattaaaagaatatcaaaccaagaaaaatggagcacacttatattaccttctcactcaagaggcacaatgcatcattatgtttaagaactttaaggttgtgcacatttccattttTccctgagcaatggttggcaatattctcaattattcggcttgtcTtttccaacagggggaataacgttggttttatctggtcccattctgaggtatctgagaaatcatctagaacaatcaagcaacttttcttttctaaaagccttttcaactgcccagtcaactcggtaacctccatcgatgctagtgatttcttactgctgactctattttCaaacagttcttccttctcagaagattctttatgtagttgctcagccaaactcctaaggagctctacaagaatgaaaggacgcatgattgtgacaaaaacatacttgtcaaacttatcactcagccttgggcTttgataaacaCcgcttactagggtggtttttccaaggCcAcccattccccacacagagatcacctgaacctgctggctatcattgtttaaaattaagtgtgttatttcagatatttctttctctcgcccaataagttgtgattcctccgaagcaccaacacttgtcctaatgcgaataagactctttctagccaccttcttctcatcagcatccattgattgatcatctataatctcaccatgggccactgtatgattgtttgtacttgtggtggccacatccgagatagacactgggttcaCtgaatcctctctattttgggaaccctaaacaaaagagagtaatgaTtaagaacaacttttagcctTaAattttcatgcatggactgtttagccttgttttcaatcatgaaagtatacaaaacaataatgacgattcctttcattaatttgcagtctaatataaaccttagttttggattctaatttgaaaaaCgtatatctgactgttcaataaaatatgtattaatttaactttaaaagaatgggataagtacactacatttaatccaaaggatgagaggatgcatttgctagattagcccattttacaatcatctctcacagatagaggaaataaatctccaaattcaataaaccGtgcgaattggatatgaactcaaataatccatatcaaaattatttgtgaaataggagcttcaaaatctattatattattaaaGgaatagaaaaaagagcctccacgttcactctcatggtctagaaattctcataTtaatcggagaaaaaaaagcagaatccatatagaaatacaatttagaaataactgaaattcGgaattaaaaaataaggaatattagaagagaagactagagtccatatagaaatacaattaggaaatagttgaaatttggaattaaaaaataaggaatattagaagagaagactagagtccatatagaaatacaattaggaaataactgaaattcagaattaaaaattaaaaataaggaatattagaagtagAgTaTagtgtccaTatagaaatacaattaagaaataacTtAaaTtcgaaattaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaataaaaaaaatagaaatttggaattAaaaaaaaggaatattagaagtagagtatagagtccatataggaatttaaaactaactacaaTttggaataaacataataaaattaaaagtagagtttagagtccgtataaaaatacaatttacaaataactaaaattcaaaaTtaagaaaaaaacatgggaagaagagtttaaagtcaatataggaatacaatttagaagtaactgaaattcgaaattAaaaattaaagaatattaaaagatgagtttagagtccacatagaaatacaattcaaaataataaaaattcagaaataaaaataagtaatattggaataagagcatagagtctAtatagaaatacaatttacagaaaactcggaattaaaaaaaagaaaTattaaaagacgagtctagagtccatataggaatatatataatttacaaataactaaaatttgatattaaaataattaatacctaacacgtatataaaatataatatgaatattacacattagtagttttgtaaagttattgcaaaatttaaaattatgttgtcatcttaatatatttgaataatataatgagaaaacatatattgctaTtatatgagagaaaatataatgatgctagccacgcaatctgcgcgggccaccatgctagttttaattgtgcaaagaggacttgtgctacattacatacttgtacaatttTGtgggtcaatctattagccaatctactacctcaattatattctccattcaaggcaatctcggtatccaatatatttcccttgaataccatcacttctactttcattagcgttgactaggggtgtaagtggctaacccacgaaacccacttatagccaaaataagccacaaacccacttattttgacctataagtgggttcgcagcttacccacttaaagcactagcattgaccgttagccaaacttcgaacatgcaacattttctaatcaaacttgtttaattttgaccagttttaaaaaaaaaatacagcaacattttcaacacaaaacaaacatattatcaaaatatattcaatgttacatttaatgaaactaatttcgtgttggatatgttgctaaatttttgtataaacttggtcaaacctaaagaagttttactggaaaaaaaactagagtgacttataatatggaacggaggtagtagaatggattagaatttaaggtcgctgaatatgaagggatggcagcaattgcagtggcagatgagggaatcagtatgtttttagttgcccttttttgcatcgttgtctgacttgtaagcctgtattagaccatttctttttctagcatacatctttgttttgacaaattcaaatacatatattttggctgtaatcttaaaatgttgagtgcatgcattcccaaaaggcaaatGAgagagaacaggaggagcacttgttagttgcattaggtcatgtgtttctaatggaatggtaactcccacgcacatcaactagcctacacaattgaatcagaaattatctaaagacataactaaattAaaaatgatatcgagaggtatgctggaagtgtgagtatattaccttatcgtagaatgcgtaaagggtttgatcagcagacaattgctttagctctgaggcttggctttcttgccctgcacataagcttgcaacttcaacttgagtgcttgacagtatgattcggcttccTttcttgcagttttggaagcatttcttaatctggtcccactcttcaatggtggataggtcattAagcacaattagacaactcctttcattgacacattcattgaaTtccttagctaaatcttgttctatcttctctttctccaacagagcttcaaccccttgggttgcatgaagctgattcaccaagctctggacaaagtcccttggattgaaaggatgaatcacccttacccatgcacggcataggaatctgatttgaacatctgggttctcgtaagccatcctgattattgttatctggcccatatcaccacttgttccccataccgcgatcactttaaggtcctgatcctcattgttgattagttggactagatccactctctgatcatcttgctttgcggcacgccttgcatcgtcaatgccaaatatggctgcagcaataacgctagattgctcagcggaggtgatggtggccttggagctgaagcccttgatgaggtggtaccgcacattcctctggctgacatcctcgaccttgttcctgagctccttcatctgcttggccacatggcgccgctcgagcagtgtgcgagggaatcgccaccaggatggcctcttcagatgaacagcaaaatcctggaggctgtcctcaacatcataggcagtgtcacggacttacttcacccaagtcttgaccactttgctgttatcttgctcctcgtgcacctccatcatgaaagacctcatcatctcaagctcatctgcaCAAATGTGTGGTCTTTCTGGATACCAAGCTGCAAGGCCACCTCCTTGGCAAATGCAGATTTTGCGTAGCCAAGCGCTCCATTCAGCACGGATTTGCCCACACTTAGCGCCGTCGCCTCCAT
More
|
||||||||||
| CDS seq | ATGGAGGCGACGGCGCTAAGTGTGGGCAAATCCGTGCTGAATGGAGCGCTTGGCTACGCAAAATCTGCATTTGCCAAGGAGGTGGCCTTGCAGCTTGAAAGACCACACATTTGtgcagatgagcttgagatgatgaggtctttcatgatggaggtgcacgaggagcaagataacagcaaagtggtcaagacttgggtgaacctccaggattttgctgttcatctgaagaggccatcctggtggcgattccctcgcacactgctcgagcggcgccatgtggccaagcagatgaaggagctcaggaacaaggtcgaggatgtcagccagaggaatgtgcggtaccacctcatcaagggcttcagctccaaggccaccatcacctccgctgagcaatctagcgttattgctgcagccatatttggcattgacgatgcaaggcgtgccgcaaagcaagatgatcagagagtggatctagtccaactaatcaacaatgaggatcaggaccttaaagtgatcgcggtatggggaacaagtggtgatatgggccagataacaataatcaggatggcttacgagaacccagatgttcaaatcagattcctatgccgtgcatgggtaagggtgattcatcctttcaatccaagggactttgtccagagcttggtgaatcagcttcatgcaacccaaggggttgaagctctgttggagaaagagaagatagaacaagatttagctaaggaAttcaatgaatgtgtcaatgaaaggagttgtctaattgtgctTaatgacctatccaccattgaagagtgggaccagattaagaaatgcttccaaaactgcaagaaAggaagccgaatcatactgtcaagcactcaagttgaagttgcaagcttatgtgcagggcaagaaagccaagcctcagagctaaagcaattgtctgctgatcaaaccctttacgcattctacgataaggattcaGtgaacccagtgtctatctcggatgtggccaccacaagtacaaacaatcatacagtggcccatggtgagattatagatgatcaatcaatggatgctgatgagaagaaggtggctagaaagagtcttattcgcattaggacaagtgttggtgcttcggaggaatcacaacttattgggcgagagaaagaaatatctgaaataacacacttaattttaaacaatgatagccagcaggttcaggtgatctctgtgtggggaatgggTgGccttggaaaaaccaccctagtaagcgGtgtttatcaaAgcccaaggctgagtgataagtttgacaagtatgtttttgtcacaatcatgcgtcctttcattcttgtagagctccttaggagtttggctgagcaactacataaagaatcttctgagaaggaagaactgtttGaaaatagagtcagcagtaagaaatcactagcatcgatggaggttaccgagttgactgggcagttgaaaaggcttttagaaaagaaaagttgcttgattgttctagatgatttctcagatacctcagaatgggaccagataaaaccaacgttattccccctgttggaaaAgacaagccgaataattgagaatattgccaaccattgctcagggAaaaatggaaatgtgcacaaccttaaagttcttaaacataatgatgcattgtgcctcttgagtgagaagGTATTTGAGGAGGCTACATATTTGGATGATCAGAACAATCCAGAGTTGGTTAAAGAAGCAAAACAAATCCTAAAGAAGTGCGATGGACTGCCCCTTGCAATAGTTGTCATAGGTGGATTCTTGGCAAACCGACCAAAGACCCCAGAAGAGTGGAGAAAATTGAACGAGAATATCAATGCTGAGTTGGAAATGAATCCAGAGCTTGGAATGATAAGAACCGTCCTTGAAAAAAGCTATGATGGTTTACCATACCATCTCAAGTCATGTTTTTTATATCTGTCCATTTTCCCTGAAGACCAGATCATTAGTCGAAGGCGTTTGGTGCATCGTTGGGCAGCAGAAGGTTACTCAACTGCAGCACATGGGAAATCTGCCATTGAAATAGCTAACGGCTACTTCATGGAACTCAAGAATAGAAGCATGATTTTACCATCCCAGCAATCAGCTCcagcaggaaatcaattgactcttgcaaagtccatgatctcattcgtgacattgccatctcaaagtcaacagaggaaaacCttgatggaggaaggcttCAgcgcgtacatacatggtgcaattcgtcatcttgctataaGtagcaactgGaagggagataagagtgaattcgaggGcatagTggacctgtcccaaatacgatccctatctctgtttgggcattgggagccatttttcgtttctagcaagatgaagtttatacGagtgctcgactttgaaaggactagaggtctaaaatatcatcaccttgatcagatttggaagcttattcacctaaaattcctttctctacgaggatgcattgatattgatctactgccagatttattgggcaacctGagacaactccaaatgctagacatcagaggtacatatgtaaAggctttgcCaaaaaccatcatcaagcttaagaagctacagtacatccatattgggcgcaaaacagactatgtatgggaggaaaaggatagtttaatgaagaggTgttgtgtggcagggtgtctgtgtgcaacatgttgcctacctcttctttggggcattgatggccctccccataagggagtacataaagaaaatggcactatggtgccaaaggggatcagaaaactgaaagacttgcacacactaagggacgtgaatgtcggaagcggaaatgctgttctacgagacatcagaatgctcacgggattacacaagttaggagtggctggcatcaacaagaagaatggacgagcgtttcacttggccatttccaacctcagcaagctggaatcactgtctgtgagttcagcagggatgcCgggtttgTgtggctgcttggatgatatatcctcgcctccggaaaacctgcagagcctcaagctgtacggcaatctgataacgttgccgggatggatcaagggcctccagcatctcgtgaagttgaaactagtgggcgctaggctattggagcacgatgttgctatggaattccttggggaactagcgaagctggaaattctagtgattgcACCGTTTAAGGGTGAAGAATTTCATTTCAAGCCAACGCAGACTGGGGCTGCTTTTGTAAGCCTCAGGGTGCTCAAGCTTGCAGAAGTGTGGGGCATCAAATCAGTCAAGTTTGAGGAAGGAACAATGCTCAAACTTGAGCGGCTGCAGGTCCAAGGGCGAGTAGAAAATGAAATTGGCTTTTCTGGGCTAGAGTTTCTCCAAAACATCAACGAAGTCTAG
More
|
||||||||||
| Protein seq | MEATALSVGKSVLNGALGYAKSAFAKEVALQLERPHICADELEMMRSFMMEVHEEQDNSKVVKTWVNLQDFAVHLKRPSWWRFPRTLLERRHVAKQMKELRNKVEDVSQRNVRYHLIKGFSSKATITSAEQSSVIAAAIFGIDDARRAAKQDDQRVDLVQLINNEDQDLKVIAVWGTSGDMGQITIIRMAYENPDVQIRFLCRAWVRVIHPFNPRDFVQSLVNQLHATQGVEALLEKEKIEQDLAKEFNECVNERSCLIVLNDLSTIEEWDQIKKCFQNCKKGSRIILSSTQVEVASLCAGQESQASELKQLSADQTLYAFYDKDSVNPVSISDVATTSTNNHTVAHGEIIDDQSMDADEKKVARKSLIRIRTSVGASEESQLIGREKEISEITHLILNNDSQQVQVISVWGMGGLGKTTLVSGVYQSPRLSDKFDKYVFVTIMRPFILVELLRSLAEQLHKESSEKEELFENRVSSKKSLASMEVTELTGQLKRLLEKKSCLIVLDDFSDTSEWDQIKPTLFPLLEKTSRIIENIANHCSGKNGNVHNLKVLKHNDALCLLSEKVFEEATYLDDQNNPELVKEAKQILKKCDGLPLAIVVIGGFLANRPKTPEEWRKLNENINAELEMNPELGMIRTVLEKSYDGLPYHLKSCFLYLSIFPEDQIISRRRLVHRWAAEGYSTAAHGKSAIEIANGYFMELKNRSMILPSQQSAPAGNQLTLAKSMISFVTLPSQSQQRKTLMEEGFSAYIHGAIRHLAISSNWKGDKSEFEGIVDLSQIRSLSLFGHWEPFFVSSKMKFIRVLDFERTRGLKYHHLDQIWKLIHLKFLSLRGCIDIDLLPDLLGNLRQLQMLDIRGTYVKALPKTIIKLKKLQYIHIGRKTDYVWEEKDSLMKRCCVAGCLCATCCLPLLWGIDGPPHKGVHKENGTMVPKGIRKLKDLHTLRDVNVGSGNAVLRDIRMLTGLHKLGVAGINKKNGRAFHLAISNLSKLESLSVSSAGMPGLCGCLDDISSPPENLQSLKLYGNLITLPGWIKGLQHLVKLKLVGARLLEHDVAMEFLGELAKLEILVIAPFKGEEFHFKPTQTGAAFVSLRVLKLAEVWGIKSVKFEEGTMLKLERLQVQGRVENEIGFSGLEFLQNINEV |
||||||||||
| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0038300 | OsARC_02g0038300.01 | Chr02 | 35018915 | 35025152 | - | NAM | ||
| CDS seq | ATGGAGGCGACGGCGCTAAGTGTGGGCAAATCCGTGCTGAATGGAGCGCTTGGCTACGCAAAATCTGCATTTGCCAAGGAGGTGGCCTTGCAGCTTGAAAGACCACACATTTGtgcagatgagcttgagatgatgaggtctttcatgatggaggtgcacgaggagcaagataacagcaaagtggtcaagacttgggtgaacctccaggattttgctgttcatctgaagaggccatcctggtggcgattccctcgcacactgctcgagcggcgccatgtggccaagcagatgaaggagctcaggaacaaggtcgaggatgtcagccagaggaatgtgcggtaccacctcatcaagggcttcagctccaaggccaccatcacctccgctgagcaatctagcgttattgctgcagccatatttggcattgacgatgcaaggcgtgccgcaaagcaagatgatcagagagtggatctagtccaactaatcaacaatgaggatcaggaccttaaagtgatcgcggtatggggaacaagtggtgatatgggccagataacaataatcaggatggcttacgagaacccagatgttcaaatcagattcctatgccgtgcatgggtaagggtgattcatcctttcaatccaagggactttgtccagagcttggtgaatcagcttcatgcaacccaaggggttgaagctctgttggagaaagagaagatagaacaagatttagctaaggaAttcaatgaatgtgtcaatgaaaggagttgtctaattgtgctTaatgacctatccaccattgaagagtgggaccagattaagaaatgcttccaaaactgcaagaaAggaagccgaatcatactgtcaagcactcaagttgaagttgcaagcttatgtgcagggcaagaaagccaagcctcagagctaaagcaattgtctgctgatcaaaccctttacgcattctacgataaggattcaGtgaacccagtgtctatctcggatgtggccaccacaagtacaaacaatcatacagtggcccatggtgagattatagatgatcaatcaatggatgctgatgagaagaaggtggctagaaagagtcttattcgcattaggacaagtgttggtgcttcggaggaatcacaacttattgggcgagagaaagaaatatctgaaataacacacttaattttaaacaatgatagccagcaggttcaggtgatctctgtgtggggaatgggTgGccttggaaaaaccaccctagtaagcgGtgtttatcaaAgcccaaggctgagtgataagtttgacaagtatgtttttgtcacaatcatgcgtcctttcattcttgtagagctccttaggagtttggctgagcaactacataaagaatcttctgagaaggaagaactgtttGaaaatagagtcagcagtaagaaatcactagcatcgatggaggttaccgagttgactgggcagttgaaaaggcttttagaaaagaaaagttgcttgattgttctagatgatttctcagatacctcagaatgggaccagataaaaccaacgttattccccctgttggaaaAgacaagccgaataattgagaatattgccaaccattgctcagggAaaaatggaaatgtgcacaaccttaaagttcttaaacataatgatgcattgtgcctcttgagtgagaagGTATTTGAGGAGGCTACATATTTGGATGATCAGAACAATCCAGAGTTGGTTAAAGAAGCAAAACAAATCCTAAAGAAGTGCGATGGACTGCCCCTTGCAATAGTTGTCATAGGTGGATTCTTGGCAAACCGACCAAAGACCCCAGAAGAGTGGAGAAAATTGAACGAGAATATCAATGCTGAGTTGGAAATGAATCCAGAGCTTGGAATGATAAGAACCGTCCTTGAAAAAAGCTATGATGGTTTACCATACCATCTCAAGTCATGTTTTTTATATCTGTCCATTTTCCCTGAAGACCAGATCATTAGTCGAAGGCGTTTGGTGCATCGTTGGGCAGCAGAAGGTTACTCAACTGCAGCACATGGGAAATCTGCCATTGAAATAGCTAACGGCTACTTCATGGAACTCAAGAATAGAAGCATGATTTTACCATCCCAGCAATCAGCTCcagcaggaaatcaattgactcttgcaaagtccatgatctcattcgtgacattgccatctcaaagtcaacagaggaaaacCttgatggaggaaggcttCAgcgcgtacatacatggtgcaattcgtcatcttgctataaGtagcaactgGaagggagataagagtgaattcgaggGcatagTggacctgtcccaaatacgatccctatctctgtttgggcattgggagccatttttcgtttctagcaagatgaagtttatacGagtgctcgactttgaaaggactagaggtctaaaatatcatcaccttgatcagatttggaagcttattcacctaaaattcctttctctacgaggatgcattgatattgatctactgccagatttattgggcaacctGagacaactccaaatgctagacatcagaggtacatatgtaaAggctttgcCaaaaaccatcatcaagcttaagaagctacagtacatccatattgggcgcaaaacagactatgtatgggaggaaaaggatagtttaatgaagaggTgttgtgtggcagggtgtctgtgtgcaacatgttgcctacctcttctttggggcattgatggccctccccataagggagtacataaagaaaatggcactatggtgccaaaggggatcagaaaactgaaagacttgcacacactaagggacgtgaatgtcggaagcggaaatgctgttctacgagacatcagaatgctcacgggattacacaagttaggagtggctggcatcaacaagaagaatggacgagcgtttcacttggccatttccaacctcagcaagctggaatcactgtctgtgagttcagcagggatgcCgggtttgTgtggctgcttggatgatatatcctcgcctccggaaaacctgcagagcctcaagctgtacggcaatctgataacgttgccgggatggatcaagggcctccagcatctcgtgaagttgaaactagtgggcgctaggctattggagcacgatgttgctatggaattccttggggaactagcgaagctggaaattctagtgattgcACCGTTTAAGGGTGAAGAATTTCATTTCAAGCCAACGCAGACTGGGGCTGCTTTTGTAAGCCTCAGGGTGCTCAAGCTTGCAGAAGTGTGGGGCATCAAATCAGTCAAGTTTGAGGAAGGAACAATGCTCAAACTTGAGCGGCTGCAGGTCCAAGGGCGAGTAGAAAATGAAATTGGCTTTTCTGGGCTAGAGTTTCTCCAAAACATCAACGAAGTCTAG
More
|
|||||||
| Protein seq | MEATALSVGKSVLNGALGYAKSAFAKEVALQLERPHICADELEMMRSFMMEVHEEQDNSKVVKTWVNLQDFAVHLKRPSWWRFPRTLLERRHVAKQMKELRNKVEDVSQRNVRYHLIKGFSSKATITSAEQSSVIAAAIFGIDDARRAAKQDDQRVDLVQLINNEDQDLKVIAVWGTSGDMGQITIIRMAYENPDVQIRFLCRAWVRVIHPFNPRDFVQSLVNQLHATQGVEALLEKEKIEQDLAKEFNECVNERSCLIVLNDLSTIEEWDQIKKCFQNCKKGSRIILSSTQVEVASLCAGQESQASELKQLSADQTLYAFYDKDSVNPVSISDVATTSTNNHTVAHGEIIDDQSMDADEKKVARKSLIRIRTSVGASEESQLIGREKEISEITHLILNNDSQQVQVISVWGMGGLGKTTLVSGVYQSPRLSDKFDKYVFVTIMRPFILVELLRSLAEQLHKESSEKEELFENRVSSKKSLASMEVTELTGQLKRLLEKKSCLIVLDDFSDTSEWDQIKPTLFPLLEKTSRIIENIANHCSGKNGNVHNLKVLKHNDALCLLSEKVFEEATYLDDQNNPELVKEAKQILKKCDGLPLAIVVIGGFLANRPKTPEEWRKLNENINAELEMNPELGMIRTVLEKSYDGLPYHLKSCFLYLSIFPEDQIISRRRLVHRWAAEGYSTAAHGKSAIEIANGYFMELKNRSMILPSQQSAPAGNQLTLAKSMISFVTLPSQSQQRKTLMEEGFSAYIHGAIRHLAISSNWKGDKSEFEGIVDLSQIRSLSLFGHWEPFFVSSKMKFIRVLDFERTRGLKYHHLDQIWKLIHLKFLSLRGCIDIDLLPDLLGNLRQLQMLDIRGTYVKALPKTIIKLKKLQYIHIGRKTDYVWEEKDSLMKRCCVAGCLCATCCLPLLWGIDGPPHKGVHKENGTMVPKGIRKLKDLHTLRDVNVGSGNAVLRDIRMLTGLHKLGVAGINKKNGRAFHLAISNLSKLESLSVSSAGMPGLCGCLDDISSPPENLQSLKLYGNLITLPGWIKGLQHLVKLKLVGARLLEHDVAMEFLGELAKLEILVIAPFKGEEFHFKPTQTGAAFVSLRVLKLAEVWGIKSVKFEEGTMLKLERLQVQGRVENEIGFSGLEFLQNINEV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.017187 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0818450 | SBH | 0.285548 | 0.0 | 0.697914 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g57305 | SBH | 0.137242 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0818450 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0038770 | SBH | 0.058725 | 1.989172 | 0.479221 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0038800 | SBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0038680 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0038340 | RBH | 1.277029 | 0.843036 | 6.294262 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0572900 | RBH | 1.3006935 | 5.031177 | 3.014533 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0038010 | RBH | 0.055218 | 0.039342 | 0.203820 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0603800 | RBH | 0.0752945 | 0.7248895 | 0.0896275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0038320 | SBH | 0.000000 | 0.029762 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0038240 | RBH | 0.174212 | 5.386992 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0038370 | RBH | 1.630922 | 2.515642 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0038380 | SBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0038050 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G038700 | SBH | 0.044022 | 0.0 | 0.107982 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0038590 | RBH | 0.0 | 3.290692 | 0.0 |
