Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_02g0003220 | OGI:02007270 | 15/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr02:2220720-2227939 | ||||||||
| Gene Symbol | ARF5, OsARF5 | ||||||||||
| DNA seq | ACAGAATTCGCAGTGGTTTCAATTTTAGTGCTTATAAGCTTGAGTGCAAATACATATAATTTCTGTGCTTTTGAATCAGTCCATATTTTACATGTGATGATGTGAAACAAACTATCTTCAATTCAGAAATTGATTGATTGGCAGAGAAGATGACAGGATAAAGAAGGAAAGGTGCAGAATATTTGCTATAGTGGTTTCTAATCTGGGTCTGATCTTAATAGAGGCTTGAACAACCCCAAGAACAGTTAGGGCAAATGTTTTCTCTAAAATACACTATCTTAAATTTCGCCTAAACCCTGTCTCAACTCGTTAACAGCTCTAGGTAAGTTCCATTCTTATCTCTAACTTTTTGCAAATGCAAAAACTACACAATATATCAAAAGAGGAAAAGAAATATTCTGAGGAGCATTTGCCCTCCCAGCTATAAGCTGACACTCTACACTGAATTCGGCGCATAGCCTTTTAGGCCACGGATTTGATGATAGTTATGCTGGGTTTTTGTAGCCATTGCATCTCTTCTGATCCCATTCTGAATTCATAATGGACGCAAAATAAGACAGGGATGTCAAATATTTCATATGTGAATGAACCTCTAAGTCAGGTCATTCGAATTGATCATACGGGCCGATGGAAGGGTTCCCGGGGTTCTGGTCACAGCGAGGCCTCCAACCATTCACCCCATCTGAGCTGCTGCAAGCCTGGTTGGGGAGGACATTGCTCCCCAGATCACCATCCAAGCTCATCTGTTGCACTTCTTGAGGTGATAGAATCCTAATGCATCTTACACAGTTCACAAACTCCCTGCATAATCCGCAACAGCTCATATTAGAATAACTAACCAGTAAAATCTTTCATCGAATAGTTCACTTGCACATCTTGTACACGCATTGTTTTTCAGTTTATGCATAAACATATTTTTCTGTCATATTATCATGCTGGATTAACCATATTTCACTCTGGTAAACATATCTTTAGCTGTCAATTTTAGCAATCTTTATTATCTTGGGGCCTATTTTAGAGCAGGAAATTAAAGGTTCACATAAGGAGAAAGATAGATATACTTACTCCCATGGGTCATCACCAAGAAGCAGGATGTCATCCTCGTGATCCTTGTAGACCAGTTTCCAGCCTATTCTCTGTCGATCTTCAAGTTGACCCTCTATACCAAACATGCGAGCCAAAGCATGCTTCAACTCTTCATATCCAGAGTACCTGCCGATGTCAATAGACCGGCCTACAGCTCCTCGTTTGTACACCTATAATTCTTAGATTAGGCTTACTAGCATACGAGCCACAAAAACACACATCTTGAATGCTACACCATCATAACCTAAGCTAAGGAAAAGCCAATACCTTGGTGAATGTCCGCATTCTCTGCAGCAGAGGGGCAGCGGGCCAGGAATTTTTGTTCAAGAAGGCACCATCATTGATCGCAGAATCAATGGAATTAAAAGCCATATCCGACTGACCAAATGACTGGGAAACCATGGAGGTTGATATTTCTTGCAGAGCATCCTTTTGCATCGGGTAGTTGTTTTCAACATCAGTTGATATGTGATTCTGATACTTGACAGAATCAAGTGCATTTATCAGCAAGTCCTCTGTTTCTATTGGGAATCCTAACAGGTTATCATTGTTGATCCCAAACAAGCCACTGTTACTTGGATCCACACCTTCCATTTCTACATCAGGAAGTGCATCTTTGAACATCTGGTGTTGATTGAAGTTAGAAGAGGGGAAACCTTGATGCACAAGTCCATCTGTTCGGGAAGGACATAATGAAGTTGCTGATGAAGATGTTTCCAAGTTGTCTGTTTGCAATGCATGGTTTATACAATTTTGTGGGCCAGGAGCAACATTTGGTAATTTTGAGTTGACAACACTTTGCTTCACATTATTATTCGGCTTTGGCAATTCCTTGGTCATTAGTGGAGTTGCTGTTACAGCGTCAATGGAGGTTGGGATCAACATTGGAGCAGTGGACGGTGGCAGCCTTTCTGTGTTGATGCAATGTCTGTTTTTGGTTGATTGTGTAAAGTGGTTTCCATTAGCTGTGGATGGAGATGTTGAACAAGAGGGCATTTCCTCTGTAACTACAGATTGTGTAGCACCCGAAATGATCATAGCACCTCCAGTTTTGGGGATCACATTGGTTGATGAAATTGGTTGAAAAGCAACTTCTGACACATCTGCAAGTGAGACTTGTTTCTGTAAAAGCTTCTGCTGTTGCTCTTGCTGGACCGTGGGTAGCAATGGTGTTGCTTGCAATGAAGGCTTGATTTCTTGTTGGGGCATCATTTGTTGCTGAGCAAGTGAATGTGAATTTGACAACTGCTTTTGCATGTCCGTGATTAACTTTTGCTGTTCTTGGATCAGAGGTGGCTGTGAGAGTGTTGATGTGGATTGTGACATCAGTGATTGCTGCTGCAGTTTCTGTAATATCTGCAACTGAAGCTCCTCATCAAACAACTTAGACTGCTGACTTGCCAGATTTACCAACTGTCCAAGGGACTTATTTAGCTGCTGCTGATTCTGTTGTTGCTGCTGCTGCTGCTGCTGTAACTGTTGTTTTTGCTGAAGTAAAAGCTGCTGTTGCAGCTGTAAATTTTGATCCTTCTGTTGATGAGACAAAAGCAGCCGCTGGCCATTAATCCTTTGCGGGTTTTGAGTTGGAGATGGCTTCTGCTGTTGCATCTGATTCTGAACAATCACCTGAGCCTGGACGAGATTAGATTGAGCTTGGCTCAGGGGAATCACTTGTATGGAGTTCTGCTGTCTCTGATGGCTGACAGCATCTTGTTTCTGATCTTGAGGATTGATGATAGCACCAAGCTGATTCAACGGAATTGCCGCCTTGGACAGATCGTTCATGGTTTGCATTTGCTGAGGGAGCTTGGGAGAATTAAACTGTATGCAGTTCTGTTGAAGGAGATTGTTCTGGACATATAGTTGCCTTGCAAGTTCATCAGCAGCAAGGTTTTGCATGGCAGGGTTACCTAGAGCTTGCAGGTACTCAGACTGCGCAGCGGTGTTAGCCAATGATGAGCTCTGCTGCCTGTTCATGTTCATCCACTGAACCAAACTTAGACCAGGTGCTGTACTGTTCTGGTTTTGAGTATCCTTTATGCATACCTCCTCACCAAGCCAAGGCATTGCCCTCTTGAAAAGGTTTTCCATCTCTGACTCGTCATCTGTTAATTCAGATAAAAGAATATGAAATATACTACCATAAAAAAAAACATATGCTAATGCGATAATGTAATTAGCCTATAGCAATCCTGGTTTCGAAACTTATACACTTGTTATCCTGTTCAGTCTACTATAACCATACACAATAACCCATTAAGTAATTCCGCATCGATGTCTAATGTTTAACAAATATGCAGACCAATTGTTTCCAGCACACATAGAATAAGCAAAAAATATGAGCAGAGAAGTACCAAACTAGTATATTCGCATACTGTTTAAATTAAGGAAAGGTATTTGCAACCAAATGTTCAGAGGCCATTTGAAGGAAATCAGTGTTGAGTATTCTTGTTGAACATACTAATATCAGTTATACCTAATTGCCTGGGGCGCTTCACACCAAAAAAAGGTTGGGGACATAGAAAAAAGGGAGCTGCAACCGGTTCAATCTCCCAGATTGAAACTCTGTTCCTCCTTTCACCAGCTGCAGACTCATCCCAGCCAACCTATAGAAATCAAATCAGCGAAATGGAAGAAAAATGAAGGGTGGAAAAAGATTAACACAACTTGAAAGGTATTCAGGAATTCAACCTGTAAATTGCGCCATTGGGAGTTTTTCCATCTCACAGGATCTAGGTCACTTATTCCAGTTATTGTACCCATGTACCTGAAAAGGTAGATATTTACCTATACGGACAACATAGCCATGATTTTTTTTTCTCCATGTTTTAAAAAGAAAGCAAAATGCATGAATCTCATTATGTTTCAAAAGTATGTGTTTTACGGATAATAAATGCCAGCGTACCTTCTTGTTCCTAATTCCTCGGTTTCAAACATCATGCGAAACCGCATTCCTAAAGATATCTGATTACTATACAGTGCCTTCTGGTATTTTGCAAATGGGATAACAAATTCAGTAGGACTGGCCCTGAAAGTTCATACACGTCAAAACACAATACTCAGAGCTATTCAGTTTTGTCTATACAACTTAGCTATTGAATGTACAGTAAACAATACAGACAGGAGTATAAAGTCAGCACGCAAACCTAGGGTTATAAAATATGGTAAAAGGGCTACTGTTGGCAGCAGCATGGGCAGCCGCAGCAAGGACTCCTATGTGCATACTGTCGCTTGAAAGTACTGAAGATGATATATTAGTCGGTTGTCTGTTAGCACGCCTGATTCCTAGTAGAAGTTGATGCTTTTCATCCCTGAAAATAACATGACAATAAAAAAAAGGGGGCATTTACATCTTGGATTTTGCTGTTTATTCTGTACCTAAACTAGGAGAAGCTTTTATTAGATGGAACTAAGGAAAGAAGCATGGAGTTCACCTCACAACAATAACAGAATCACCAGCAAATAACCTCTTGCCACTCACGAAAAGGCTCCAACCAGTAGTAAGTAAATGTCTTTTTGGTTGACCTGATAACACAAAGCACAGAAATAATTAACTGTCTCCAAACTTTACATATACGCATCAAAGACATTCAATAGAAGTATAGAACTAGGGACCTCTGTTAACTTTTATAAACCATAAGACAGACATTATCGTTCACTATTAATTAGCTTAATAATAGAAAACTGATGCAGAAGTGGTACCCATGTTGGTATTATTATAGGAAAACTATAGATCAAATTCAATTTCCGAAACTGCAAAGGCATACTCTGCCTTACCAAGGTCAATGGAGGGGCTATCCAGAACAAAAGTAGATACTAGATGCATGGAGAATCTCATTTATCCTGCCATTTTACAAAGAATGTTATACTGAATGTTAAATTTTCCACACCTCGATATATATGACGAAATGTCCACACATTGTCATGTATATCTCTAGCTTGCAGTTCTTGAGCTGGAGGTTGCATAGAGAAGTCCTACAGTGCAGAGTGGCAAAATTACAATGGTGCTAAGAACAGATCTTTTGTTGCAGAAAATCAGAAGATATGAAGCCTACATACCAGGGGAGGGAATATCTTCTCTGCGGCACGGCGAGGCACAGAGAATCCTCCATGTGTACTTGTATCACTTGCGGTGAGTGTCTTACAGAAGAATTCCATTTGTGGCCTTGCTTGTTTTAGTGCAAGCTCTGATAGTTGCAACGCCTCTTTTCCATACTGATAAAAGCAATTGATGAGTGCATTTGAACAGACTAGGAACTTTTGCGGAAACCACAATTTTTTGTTTGCTCACTGTATTCACTGGTTGAAGAGTCATCTGTGCATAAACTTCATCAGTATCTGGGTCTGCCTGATAGGTAAAGATAATGATTTTAGTATTGCTGATTGCTAGTTCTTAAAGCAAAGAGAAAATGGAAGGCAAGTAGCTTTAGGTACATGCAAATTGACACCGTGAAGAAGACATATCAACTTGGAGGGAAGATTTGGGTAGCTTGGAACATGTGCATCCACATCCTTTTGCATAGAAGCTGCAACCTGAAACAAAAAGCTTAGATTAAGTAGATATTCTGCTGTTTCCAATAGCATGGAGAAAGCATTTCTTAATATCTGAAACAATGAAAAATGCAGTCAGCTGAACCAAGTAGCCAGTATATGTGGATCAACATCCACTTTTTTCAAACTGAAAAAAAAAGGTTTTGTGCTCAAGAACATGGAAGTGGAAAACGAAAAGTACTACTGCACTACTCTGTAAACTAGCACTCGATAACCATCTCATAAAAATTTAAGAAAGTACAACCTTTCAAACATACTATGTTACTTTTGTACACCTGTCAACAAAATTTCAATAAAAAAATGAAGTTTCGTAGTGTCCAGTCCAGAAAGTGCGGTTCATGAGTGAACTTTTTTTAGATAAACTCGCATAAGTACAATTACCATCATGTGCAGCGCAACCAAATATCATTCATGAAAAAGGACCTTTTTTCTCATCTTTCTAAAAAGAAATGCACGAATAATTGCAGGATTAGTCCTCCCAAGACTGTCTATTGACCTAATAATTAATTATTTATTTTTTCAATCAGAGCACCATACCTTACCATTTGACAAAATTTCTCAAAACAAGTAGGAGTATTTATTTATTACAATCGGTTGGACTAGAAATGATCCATCTCAGGGTCATGGATGCAAGAAATCCAAATCCCATAAGATGCTTCATGGAGACCAAACCACATTAACATCGAAACAGTACTCACCATACTAGTAGGGCAACAGAAAAGGGAAGCCAGTAGGCCCAATGCTCCCAACCACTTTGGTAATGAACAAGTACAGTTATTAGTAGCTACATACAAGCAGAGATGTCTCTGCTAGCAAGTAAAATCCTCACATACATTAGCAGTGAACAATGCATCATGTGAGAAATACTCTTCAACTCTTTTGTTATAAAAAAATTATCTTCCATAGGAGATCAAATATCCAAAGCCAAAATTTTATTTGGGGTGTAAGTAAAACATTTGCTCTGAGAAGGATCGTTGCACTGTATCAATCACTGCAACAGTACATACAGAAAGAAATAAAGAAAAGTTCTTTTCTGTAATTAACCAAAAGAAAAAAATTCCCATTGAACAACCCACAGAAATCTGAGAGTTTCACCTCAAAACGCACAAAAAAGACCACAAATTTTCAACCTTGCCATGAGCAGCATCATCAGATTAACATTATACTAGAGGAGAGGAGAGAGCATCCAAAATACAGCAGAGATTAAACAGCAAGAACTGAAGAAGTCTTCGATCAAACTAGGTCGATGATGGAAGAAGAGGAGAGAGAGAGAGAGAGATGATGATGACCTGCTCGCTGTGGCCTTGCGGGAAGTAGACGACGAGGCTGCCCACCGGCGGCAGCGACACGAGCGGGCCGGCGCACGCGTGCCACAGCTCCGAGTTGATCGCCGCCGCCTTCCGCTCCCCTGCACCGCCGCAGCCGCCGCGTCAGCCACCGCCACCAGACGAGCGAGGAGAAGAGAAAAAAAAAAGCAGTATACCTTCGCATGCGGCCACGGCGGCGGTGGCGGAGGAGGAGGCCGCCGCCGCCGCGGTCACCGCGGAGCTCGCCGGCGTCTGCTGCTGCTTCATGCTCGCCAT
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| CDS seq | ATGGCGAGCATGAAGCAGCAGCAGACGCCGGCGAGCTCCGCGGTGACCGCGGCGGCGGCGGCCTCCTCCTCCGCCACCGCCGCCGTGGCCGCATGCGAAGGGGAGCGGAAGGCGGCGGCGATCAACTCGGAGCTGTGGCACGCGTGCGCCGGCCCGCTCGTGTCGCTGCCGCCGGTGGGCAGCCTCGTCGTCTACTTCCCGCAAGGCCACAGCGAGCAGATATTAAGAAATGCTTTCTCCATGCTATTGGAAACAGCAGAATATCTACTTAATCTAAGCTTTTTGTTTCAGGTTGCAGCTTCTATGCAAAAGGATGTGGATGCACATGTTCCAAGCTACCCAAATCTTCCCTCCAAGTTGATATGTCTTCTTCACGGTGTCAATTTGCATGCAGACCCAGATACTGATGAAGTTTATGCACAGATGACTCTTCAACCAGTGAATACATATGGAAAAGAGGCGTTGCAACTATCAGAGCTTGCACTAAAACAAGCAAGGCCACAAATGGAATTCTTCTGTAAGACACTCACCGCAAGTGATACAAGTACACATGGAGGATTCTCTGTGCCTCGCCGTGCCGCAGAGAAGATATTCCCTCCCCTGGACTTCTCTATGCAACCTCCAGCTCAAGAACTGCAAGCTAGAGATATACATGACAATGTGTGGACATTTCGTCATATATATCGAGGTCAACCAAAAAGACATTTACTTACTACTGGTTGGAGCCTTTTCGTGAGTGGCAAGAGGTTATTTGCTGGTGATTCTGTTATTGTTGTGAGGGATGAAAAGCATCAACTTCTACTAGGAATCAGGCGTGCTAACAGACAACCGACTAATATATCATCTTCAGTACTTTCAAGCGACAGTATGCACATAGGAGTCCTTGCTGCGGCTGCCCATGCTGCTGCCAACAGTAGCCCTTTTACCATATTTTATAACCCTAGGGCCAGTCCTACTGAATTTGTTATCCCATTTGCAAAATACCAGAAGGCACTGTATAGTAATCAGATATCTTTAGGAATGCGGTTTCGCATGATGTTTGAAACCGAGGAATTAGGAACAAGAAGGTACATGGGTACAATAACTGGAATAAGTGACCTAGATCCTGTGAGATGGAAAAACTCCCAATGGCGCAATTTACAGGTTGGCTGGGATGAGTCTGCAGCTGGTGAAAGGAGGAACAGAGTTTCAATCTGGGAGATTGAACCGGTTGCAGCTCCCTTTTTTCTATGTCCCCAACCTTTTTTTGGTGTGAAGCGCCCCAGGCAATTAGATGACGAGTCAGAGATGGAAAACCTTTTCAAGAGGGCAATGCCTTGGCTTGGTGAGGAGGTATGCATAAAGGATACTCAAAACCAGAACAGTACAGCACCTGGTCTAAGTTTGGTTCAGTGGATGAACATGAACAGGCAGCAGAGCTCATCATTGGCTAACACCGCTGCGCAGTCTGAGTACCTGCAAGCTCTAGGTAACCCTGCCATGCAAAACCTTGCTGCTGATGAACTTGCAAGGCAACTATATGTCCAGAACAATCTCCTTCAACAGAACTGCATACAGTTTAATTCTCCCAAGCTCCCTCAGCAAATGCAAACCATGAACGATCTGTCCAAGGCGGCAATTCCGTTGAATCAGCTTGGTGCTATCATCAATCCTCAAGATCAGAAACAAGATGCTGTCAGCCATCAGAGACAGCAGAACTCCATACAAGTGATTCCCCTGAGCCAAGCTCAATCTAATCTCGTCCAGGCTCAGGTGATTGTTCAGAATCAGATGCAACAGCAGAAGCCATCTCCAACTCAAAACCCGCAAAGGATTAATGGCCAGCGGCTGCTTTTGTCTCATCAACAGAAGGATCAAAATTTACAGCTGCAACAGCAGCTTTTACTTCAGCAAAAACAACAGTTACAGCAGCAGCAGCAGCAGCAACAACAGAATCAGCAGCAGCTAAATAAGTCCCTTGGACAGTTGGTAAATCTGGCAAGTCAGCAGTCTAAGTTGTTTGATGAGGAGCTTCAGTTGCAGATATTACAGAAACTGCAGCAGCAATCACTGATGTCACAATCCACATCAACACTCTCACAGCCACCTCTGATCCAAGAACAGCAAAAGTTAATCACGGACATGCAAAAGCAGTTGTCAAATTCACATTCACTTGCTCAGCAACAAATGATGCCCCAACAAGAAATCAAGCCTTCATTGCAAGCAACACCATTGCTACCCACGGTCCAGCAAGAGCAACAGCAGAAGCTTTTACAGAAACAAGTCTCACTTGCAGATGTGTCAGAAGTTGCTTTTCAACCAATTTCATCAACCAATGTGATCCCCAAAACTGGAGGTGCTATGATCATTTCGGGTGCTACACAATCTGTAGTTACAGAGGAAATGCCCTCTTGTTCAACATCTCCATCCACAGCTAATGGAAACCACTTTACACAATCAACCAAAAACAGACATTGCATCAACACAGAAAGGCTGCCACCGTCCACTGCTCCAATGTTGATCCCAACCTCCATTGACGCTGTAACAGCAACTCCACTAATGACCAAGGAATTGCCAAAGCCGAATAATAATGTGAAGCAAAGTGTTGTCAACTCAAAATTACCAAATGTTGCTCCTGGCCCACAAAATTGTATAAACCATGCATTGCAAACAGACAACTTGGAAACATCTTCATCAGCAACTTCATTATGTCCTTCCCGAACAGATGGACTTGTGCATCAAGGTTTCCCCTCTTCTAACTTCAATCAACACCAGATGTTCAAAGATGCACTTCCTGATGTAGAAATGGAAGGTGTGGATCCAAGTAACAGTGGCTTGTTTGGGATCAACAATGATAACCTGTTAGGATTCCCAATAGAAACAGAGGACTTGCTGATAAATGCACTTGATTCTGTCAAGTATCAGAATCACATATCAACTGATGTTGAAAACAACTACCCGATGCAAAAGGATGCTCTGCAAGAAATATCAACCTCCATGGTTTCCCAGTCATTTGGTCAGTCGGATATGGCTTTTAATTCCATTGATTCTGCGATCAATGATGGTGCCTTCTTGAACAAAAATTCCTGGCCCGCTGCCCCTCTGCTGCAGAGAATGCGGACATTCACCAAGGTGTACAAACGAGGAGCTGTAGGCCGGTCTATTGACATCGGCAGGTACTCTGGATATGAAGAGTTGAAGCATGCTTTGGCTCGCATGTTTGGTATAGAGGGTCAACTTGAAGATCGACAGAGAATAGGCTGGAAACTGGTCTACAAGGATCACGAGGATGACATCCTGCTTCTTGGTGATGACCCATGGGAGGAGTTTGTGAACTGTGTAAGATGCATTAGGATTCTATCACCTCAAGAAGTGCAACAGATGAGCTTGGATGGTGATCTGGGGAGCAATGTCCTCCCCAACCAGGCTTGCAGCAGCTCAGATGGGGTGAATGGTTGGAGGCCTCGCTGTGACCAGAACCCCGGGAACCCTTCCATCGGCCCGTATGATCAATTCGAATGA
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| Protein seq | MASMKQQQTPASSAVTAAAAASSSATAAVAACEGERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQILRNAFSMLLETAEYLLNLSFLFQVAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKRPRQLDDESEMENLFKRAMPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQNNLLQQNCIQFNSPKLPQQMQTMNDLSKAAIPLNQLGAIINPQDQKQDAVSHQRQQNSIQVIPLSQAQSNLVQAQVIVQNQMQQQKPSPTQNPQRINGQRLLLSHQQKDQNLQLQQQLLLQQKQQLQQQQQQQQQNQQQLNKSLGQLVNLASQQSKLFDEELQLQILQKLQQQSLMSQSTSTLSQPPLIQEQQKLITDMQKQLSNSHSLAQQQMMPQQEIKPSLQATPLLPTVQQEQQQKLLQKQVSLADVSEVAFQPISSTNVIPKTGGAMIISGATQSVVTEEMPSCSTSPSTANGNHFTQSTKNRHCINTERLPPSTAPMLIPTSIDAVTATPLMTKELPKPNNNVKQSVVNSKLPNVAPGPQNCINHALQTDNLETSSSATSLCPSRTDGLVHQGFPSSNFNQHQMFKDALPDVEMEGVDPSNSGLFGINNDNLLGFPIETEDLLINALDSVKYQNHISTDVENNYPMQKDALQEISTSMVSQSFGQSDMAFNSIDSAINDGAFLNKNSWPAAPLLQRMRTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDGDLGSNVLPNQACSSSDGVNGWRPRCDQNPGNPSIGPYDQFE |
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| Function | Auxin response factor 5 [UniProtKB/Swiss-Prot:Q6Z2W3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_02g0003220 | OsARC_02g0003220.01 | Chr02 | 2220720 | 2227939 | - | NAM | ||
| CDS seq | ATGGCGAGCATGAAGCAGCAGCAGACGCCGGCGAGCTCCGCGGTGACCGCGGCGGCGGCGGCCTCCTCCTCCGCCACCGCCGCCGTGGCCGCATGCGAAGGGGAGCGGAAGGCGGCGGCGATCAACTCGGAGCTGTGGCACGCGTGCGCCGGCCCGCTCGTGTCGCTGCCGCCGGTGGGCAGCCTCGTCGTCTACTTCCCGCAAGGCCACAGCGAGCAGATATTAAGAAATGCTTTCTCCATGCTATTGGAAACAGCAGAATATCTACTTAATCTAAGCTTTTTGTTTCAGGTTGCAGCTTCTATGCAAAAGGATGTGGATGCACATGTTCCAAGCTACCCAAATCTTCCCTCCAAGTTGATATGTCTTCTTCACGGTGTCAATTTGCATGCAGACCCAGATACTGATGAAGTTTATGCACAGATGACTCTTCAACCAGTGAATACATATGGAAAAGAGGCGTTGCAACTATCAGAGCTTGCACTAAAACAAGCAAGGCCACAAATGGAATTCTTCTGTAAGACACTCACCGCAAGTGATACAAGTACACATGGAGGATTCTCTGTGCCTCGCCGTGCCGCAGAGAAGATATTCCCTCCCCTGGACTTCTCTATGCAACCTCCAGCTCAAGAACTGCAAGCTAGAGATATACATGACAATGTGTGGACATTTCGTCATATATATCGAGGTCAACCAAAAAGACATTTACTTACTACTGGTTGGAGCCTTTTCGTGAGTGGCAAGAGGTTATTTGCTGGTGATTCTGTTATTGTTGTGAGGGATGAAAAGCATCAACTTCTACTAGGAATCAGGCGTGCTAACAGACAACCGACTAATATATCATCTTCAGTACTTTCAAGCGACAGTATGCACATAGGAGTCCTTGCTGCGGCTGCCCATGCTGCTGCCAACAGTAGCCCTTTTACCATATTTTATAACCCTAGGGCCAGTCCTACTGAATTTGTTATCCCATTTGCAAAATACCAGAAGGCACTGTATAGTAATCAGATATCTTTAGGAATGCGGTTTCGCATGATGTTTGAAACCGAGGAATTAGGAACAAGAAGGTACATGGGTACAATAACTGGAATAAGTGACCTAGATCCTGTGAGATGGAAAAACTCCCAATGGCGCAATTTACAGGTTGGCTGGGATGAGTCTGCAGCTGGTGAAAGGAGGAACAGAGTTTCAATCTGGGAGATTGAACCGGTTGCAGCTCCCTTTTTTCTATGTCCCCAACCTTTTTTTGGTGTGAAGCGCCCCAGGCAATTAGATGACGAGTCAGAGATGGAAAACCTTTTCAAGAGGGCAATGCCTTGGCTTGGTGAGGAGGTATGCATAAAGGATACTCAAAACCAGAACAGTACAGCACCTGGTCTAAGTTTGGTTCAGTGGATGAACATGAACAGGCAGCAGAGCTCATCATTGGCTAACACCGCTGCGCAGTCTGAGTACCTGCAAGCTCTAGGTAACCCTGCCATGCAAAACCTTGCTGCTGATGAACTTGCAAGGCAACTATATGTCCAGAACAATCTCCTTCAACAGAACTGCATACAGTTTAATTCTCCCAAGCTCCCTCAGCAAATGCAAACCATGAACGATCTGTCCAAGGCGGCAATTCCGTTGAATCAGCTTGGTGCTATCATCAATCCTCAAGATCAGAAACAAGATGCTGTCAGCCATCAGAGACAGCAGAACTCCATACAAGTGATTCCCCTGAGCCAAGCTCAATCTAATCTCGTCCAGGCTCAGGTGATTGTTCAGAATCAGATGCAACAGCAGAAGCCATCTCCAACTCAAAACCCGCAAAGGATTAATGGCCAGCGGCTGCTTTTGTCTCATCAACAGAAGGATCAAAATTTACAGCTGCAACAGCAGCTTTTACTTCAGCAAAAACAACAGTTACAGCAGCAGCAGCAGCAGCAACAACAGAATCAGCAGCAGCTAAATAAGTCCCTTGGACAGTTGGTAAATCTGGCAAGTCAGCAGTCTAAGTTGTTTGATGAGGAGCTTCAGTTGCAGATATTACAGAAACTGCAGCAGCAATCACTGATGTCACAATCCACATCAACACTCTCACAGCCACCTCTGATCCAAGAACAGCAAAAGTTAATCACGGACATGCAAAAGCAGTTGTCAAATTCACATTCACTTGCTCAGCAACAAATGATGCCCCAACAAGAAATCAAGCCTTCATTGCAAGCAACACCATTGCTACCCACGGTCCAGCAAGAGCAACAGCAGAAGCTTTTACAGAAACAAGTCTCACTTGCAGATGTGTCAGAAGTTGCTTTTCAACCAATTTCATCAACCAATGTGATCCCCAAAACTGGAGGTGCTATGATCATTTCGGGTGCTACACAATCTGTAGTTACAGAGGAAATGCCCTCTTGTTCAACATCTCCATCCACAGCTAATGGAAACCACTTTACACAATCAACCAAAAACAGACATTGCATCAACACAGAAAGGCTGCCACCGTCCACTGCTCCAATGTTGATCCCAACCTCCATTGACGCTGTAACAGCAACTCCACTAATGACCAAGGAATTGCCAAAGCCGAATAATAATGTGAAGCAAAGTGTTGTCAACTCAAAATTACCAAATGTTGCTCCTGGCCCACAAAATTGTATAAACCATGCATTGCAAACAGACAACTTGGAAACATCTTCATCAGCAACTTCATTATGTCCTTCCCGAACAGATGGACTTGTGCATCAAGGTTTCCCCTCTTCTAACTTCAATCAACACCAGATGTTCAAAGATGCACTTCCTGATGTAGAAATGGAAGGTGTGGATCCAAGTAACAGTGGCTTGTTTGGGATCAACAATGATAACCTGTTAGGATTCCCAATAGAAACAGAGGACTTGCTGATAAATGCACTTGATTCTGTCAAGTATCAGAATCACATATCAACTGATGTTGAAAACAACTACCCGATGCAAAAGGATGCTCTGCAAGAAATATCAACCTCCATGGTTTCCCAGTCATTTGGTCAGTCGGATATGGCTTTTAATTCCATTGATTCTGCGATCAATGATGGTGCCTTCTTGAACAAAAATTCCTGGCCCGCTGCCCCTCTGCTGCAGAGAATGCGGACATTCACCAAGGTGTACAAACGAGGAGCTGTAGGCCGGTCTATTGACATCGGCAGGTACTCTGGATATGAAGAGTTGAAGCATGCTTTGGCTCGCATGTTTGGTATAGAGGGTCAACTTGAAGATCGACAGAGAATAGGCTGGAAACTGGTCTACAAGGATCACGAGGATGACATCCTGCTTCTTGGTGATGACCCATGGGAGGAGTTTGTGAACTGTGTAAGATGCATTAGGATTCTATCACCTCAAGAAGTGCAACAGATGAGCTTGGATGGTGATCTGGGGAGCAATGTCCTCCCCAACCAGGCTTGCAGCAGCTCAGATGGGGTGAATGGTTGGAGGCCTCGCTGTGACCAGAACCCCGGGAACCCTTCCATCGGCCCGTATGATCAATTCGAATGA
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| Protein seq | MASMKQQQTPASSAVTAAAAASSSATAAVAACEGERKAAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQILRNAFSMLLETAEYLLNLSFLFQVAASMQKDVDAHVPSYPNLPSKLICLLHGVNLHADPDTDEVYAQMTLQPVNTYGKEALQLSELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKRPRQLDDESEMENLFKRAMPWLGEEVCIKDTQNQNSTAPGLSLVQWMNMNRQQSSSLANTAAQSEYLQALGNPAMQNLAADELARQLYVQNNLLQQNCIQFNSPKLPQQMQTMNDLSKAAIPLNQLGAIINPQDQKQDAVSHQRQQNSIQVIPLSQAQSNLVQAQVIVQNQMQQQKPSPTQNPQRINGQRLLLSHQQKDQNLQLQQQLLLQQKQQLQQQQQQQQQNQQQLNKSLGQLVNLASQQSKLFDEELQLQILQKLQQQSLMSQSTSTLSQPPLIQEQQKLITDMQKQLSNSHSLAQQQMMPQQEIKPSLQATPLLPTVQQEQQQKLLQKQVSLADVSEVAFQPISSTNVIPKTGGAMIISGATQSVVTEEMPSCSTSPSTANGNHFTQSTKNRHCINTERLPPSTAPMLIPTSIDAVTATPLMTKELPKPNNNVKQSVVNSKLPNVAPGPQNCINHALQTDNLETSSSATSLCPSRTDGLVHQGFPSSNFNQHQMFKDALPDVEMEGVDPSNSGLFGINNDNLLGFPIETEDLLINALDSVKYQNHISTDVENNYPMQKDALQEISTSMVSQSFGQSDMAFNSIDSAINDGAFLNKNSWPAAPLLQRMRTFTKVYKRGAVGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVRCIRILSPQEVQQMSLDGDLGSNVLPNQACSSSDGVNGWRPRCDQNPGNPSIGPYDQFE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.023309 | 0.137413 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0141100 | RBH | 1.019477 | 1.882288 | 3.216867 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g04810 | RBH | 0.776814 | 1.120111 | 0.661903 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0141100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0003220 | RBH | 0.231390 | 11.034527 | 9.329119 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0003310 | RBH | 0.178408 | 2.149103 | 5.061338 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0003250 | RBH | 0.618226 | 8.892216 | 13.777026 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0027760 | RBH | 0.042026 | 0.795843 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0003250 | RBH | 3.595832 | 3.766985 | 23.825481 |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0003170 | RBH | 0.184518 | 0.298414 | 2.439090 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0039200 | RBH | 7.9732155 | 10.0838285 | 14.183066 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0003250 | RBH | 0.164284 | 0.115910 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0003170 | RBH | 0.186938 | 3.067894 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0003250 | RBH | 2.009516 | 9.518978 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0003320 | RBH | 0.840637 | 0.168269 | 1.836958 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0003280 | RBH | 0.359519 | 1.903377 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G003290 | RBH | 0.306519 | 1.985250 | 2.646244 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0003220 | RBH | 0.000000 | 6.169037 | 10.679874 |
