Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsARC_01g0041800 | OGI:01113240 | 11/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr01:38582752-38583195 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGCACGCTGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCTCCCTGGTTACAATCGACAATGGATACTGTCTTCCTGAGAGTGTAAGCACTGACGCTGATAGATTTTCTTCTAGCTAATTGATTTCCATTTTGTTCGTTGGTGATCATGCATCGATCACGCATGTGCAGTTTGAGGATTGCACATTCGAGTGGCTCTGCTGGCCGCAGTGTAGGCAGCCATTCAGCGAGGAGATGGTGGAGTACATAAGGTCACTGGACGCCGAGGAGGACATCGCCATTCTGAGGTTCCATGGCTGGGACATGTCAGGCAAGTGTGAGCGCATCCTGTGCGTCACCACCATGCTACTCAAGAAAGGCGTGGACACGGGCCTCGCCGCGTTCCACATGAGGAGCATCTTGTGCAGGGATGGGGCCAGACGGTCCCCGGAGTGA
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CDS seq | ATGCACGCTGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCTCCCTGGTTACAATCGACAATGGATACTGTCTTCCTGAGAGTTTTGAGGATTGCACATTCGAGTGGCTCTGCTGGCCGCAGTGTAGGCAGCCATTCAGCGAGGAGATGGTGGAGTACATAAGGTCACTGGACGCCGAGGAGGACATCGCCATTCTGAGGTTCCATGGCTGGGACATGTCAGGCAAGTGTGAGCGCATCCTGTGCGTCACCACCATGCTACTCAAGAAAGGCGTGGACACGGGCCTCGCCGCGTTCCACATGAGGAGCATCTTGTGCAGGGATGGGGCCAGACGGTCCCCGGAGTGA |
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Protein seq | MHAGNILTCRDEQGHGLSLVTIDNGYCLPESFEDCTFEWLCWPQCRQPFSEEMVEYIRSLDAEEDIAILRFHGWDMSGKCERILCVTTMLLKKGVDTGLAAFHMRSILCRDGARRSPE |
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Function | Phosphatidylinositol 4-kinase gamma 4 [UniProtKB/Swiss-Prot:Q9ZPY9] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsARC_01g0041800 | OsARC_01g0041800.01 | Chr01 | 38582752 | 38583195 | + | NAM | ||
CDS seq | ATGCACGCTGGCAACATCCTCACCTGCAGAGACGAACAAGGCCATGGCCTCTCCCTGGTTACAATCGACAATGGATACTGTCTTCCTGAGAGTTTTGAGGATTGCACATTCGAGTGGCTCTGCTGGCCGCAGTGTAGGCAGCCATTCAGCGAGGAGATGGTGGAGTACATAAGGTCACTGGACGCCGAGGAGGACATCGCCATTCTGAGGTTCCATGGCTGGGACATGTCAGGCAAGTGTGAGCGCATCCTGTGCGTCACCACCATGCTACTCAAGAAAGGCGTGGACACGGGCCTCGCCGCGTTCCACATGAGGAGCATCTTGTGCAGGGATGGGGCCAGACGGTCCCCGGAGTGA
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Protein seq | MHAGNILTCRDEQGHGLSLVTIDNGYCLPESFEDCTFEWLCWPQCRQPFSEEMVEYIRSLDAEEDIAILRFHGWDMSGKCERILCVTTMLLKKGVDTGLAAFHMRSILCRDGARRSPE |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.0 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
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Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0270700 | SBH | 0.0 | 0.0 | 3.970741 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g51230 | SBH | 0.0 | 0.070789 | 1.575232 |
Nipponbare | IRGSP 1.0 | RAP-db | Os05g0590100 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0042420 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0041990 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0042330 | RBH | 0.0 | 0.0 | 0.000000 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0028860 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0028730 | SBH | 0.0 | 0.0 | 17.060280 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0628100 | RBH | 0 | 0 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0028440 | SBH | 0.0 | 0.0 | 4.924353 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0628400 | RBH | 0 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0041360 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0041300 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0041550 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0028740 | SBH | 0.0 | 0.0 | 1.529603 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0041370 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G028310 | SBH | 0.0 | 0.0 | 3.507805 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0041450 | RBH | 0.0 | 0.0 | 0.0 |