Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_01g0031170 | OGI:01090910 | 15/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr01:30425264-30431614 | ||||||||
| Gene Symbol | HXK9, OsHXK9, - | ||||||||||
| DNA seq | ATCGACTCGTGTCGCCGTCTCGCCGAGCGAACCCGACGTCGTCGGCGATGAGGAAGGCGGCGGCGCTGGCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGGCAACGTCGGGCGGCGAAGCGGTCGGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAGGAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAGATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTTGACTCCCTCCCCTCCGGGTAAAAGTCCCAGTCCCCTTCCCACCCCCAGTGCTAAACCCCACCTCTTCGATTCAATTGGAGAGCGATTGGTCCTCCTGATCGAAGAGAGGGACTTCTTTCTGTACTTAATGCTTGTGCTATGTCGCTTTCTACGTCGGATGGCGTTGATGATAGTGTTGTGGACAGTAGGCGAAAATTTCTGGTTTGCGTGAATGGATTATTTTGTTAAGGATGTTTCACATGCTAATTTGGTCTAGAAGTTGATGTTTATAATTAAGTCAATCAGAGGTATATTATGGCTGGCTTCCTTGTCTTTCGTATGAAATTGAAGGGAGTGAATGGTTTGTCCTGCATTACTAGGAGGTTAATGTGATTTGAGGTATCCTGGAAACGCGCATATGATGTGCTGATCGAATTGACTTGGGAGTCCTGACTTTAAAACTAACATAAGCTATATGAAGCATGCTGACACAATCGTGTGGCAGAGCTATTACACAAAGATATTGTATCTAATATATTGTCGTGCAATCCTTTTGCGTGTACGCGAAAAAACACAAAGATTTTGTACAATTGCAAGCGCACGGCTGTATTATTGCTCTTGTCTAACAGTAGAGGTTACATCTGTCTGTGTCTGAATTTCACAAAATGGACATGACTTATTGAACTGTGTATCCATGGCTATCTTACATTTCAATCGTTGCATGGATTTTGCATTTTCAGCACACAGTAATCTGATATCTGTTAGAAAATTATTGAAGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACAAATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGACTCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGTAAATCATGTCTCACTTTCTGCAATTTGTTCGTTCCAATCATTTTTATGATTCTATACTAAGTCTGGCACATTTGGTGTGATTTTGCTCTAGGAGTTGTTTGATTTTGTTGCTGCGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCAGTTTTGTTACCTCACATATGTAAACCAAATGAAAATCCTAAGGAAGGATATCCAGCTTCATTGTGAATTTAAAAAAAAAAAAACATGTCGTCCTGGATGGAAATTCACCAATTGTGAATTCTCTTTTAGTTCTGTTATATCTTATATATCCAATTAGTTGTGTATAACATACTTACTTGTTGCTTTGAAGGCAGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGACGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAGCTTCTTTTGATATCCATCTTATGCTCAATAGGAGAAACACTGCTAGAAGATAATGTTGTGGCTATTGTCATGTTTTATTGCACTGGCCATACAAATTGAAGTGTAAAACACTACCCTTTCAGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGGATCATGATACTATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCAATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGGTGTGTTTTTTCAGTCCATACTTCTGTAGTTCTGTTTGCTAGTTAGTCCGTCTCCTATTATCCCAAGGTACAAGGCATGCAAAAGATCATGCTTAGCAGTTTATATTGTTTGTAGTCTTGCGCGAATAAGAAAAGGCAACAATAAAATATAAGAGGGACTTTTGCATTGTTGATAATTTTGACGTGTTTATTTGTTAGTTTCTTTGCTTTGGTAAAAGGTAATAAACATGGAATGGGGTAACTTTAAGTCCTCACATCTTCCACTTACTGAATTTGATCAAGAGTTGGATGCAGAAAGTTTGAACCCTGGCAAACAGGTATTACCCTTATGTTGTTGCTCCCTTTTGTGGGTAATGACTCATGATAAGGATATTGCCCTACCAGGTTTACGAGAAATTGATTTCTGGTATGTATATGGGGGAACTTGTTCGAAGAATCTTACTAAAGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATACATCTTAAGGTATGCTGTTCAGTATTTCTGTTTTATTTTCTTTTATTAATCATTTTCGATATTTGTCCAGAAGCTCATGAAAAGGATGAATTGCTAATGAATCTGTAGTTGCCTTCCTAGGCTCTATTACAAACTTCAAGTCATTAGAATTCTATAAAGTCTGTCGCTATTTGGGTACAGAACTAAATGGTACCAACAATAATAGAAATAGACGAATGTCTTCCTAAGTGAGAACATCCTGCAGGTTGATATTTCCTGTAGTAGATATGGCTAGACTACCAATAAACAGAAGCAGTTTATCTGAGTAAAGCAAGAAAAAAGATTCTGCAAGTTGGTAGTAGATATAGATATAAATAGAGTTTTGAATTTTTTTTCTAGGCTTTATGTGACTAATTTGTCATTTGTCCTTAATTAAAGCATGTTCTGGTAGCTCTTCAAATTAAACTGAACCATTTACTTTTTCCGACAATTGTCGTTTTACATTGCATTACAGGACACTTGACATGCTGATCATGCATCATGATACATCATCTGATCTCAGAACAGTTGCCAACAAGTTGAAAGAAGTCTTGGGGGTATTTTTCATCTTTCTATCTTCACTAATACTGTCATTTGTTCAATCCCTACAATGATCATAGTTGGTTTTCAGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTTTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGTTCATAATATTCTAAAAAAAAGAAGCTGAATCTGCAGATAGCTCTTAATATTCTGAAAAAACTGTCAAAAAATAATATTCTGAAAAAAAACTGTGTATTAAGGTGATAAACAATAGGTTTTGGAGCAATTTTTTTTTAAGATAATGGATTAAACCGGCCTCTACATCCAAACGAGATTCTAGAGCAATAGCAGCTATACAGTTTGCCTAAGGGCTAAATATCTTGTATTTTGCAAATGTCAATTGTACATGAACTCTATCTGCAATATCTGTTCAGTGTTTCAGTGGGTCATAGACACTGTGGTTATATATCAATTACGAGTTTTTTTATGGTACTTGATGAGGTACTGCAATGTTAGTTCAACTCTGCACTGGAAATCTGTTCATTTTCAGGGAGTTCTTGTTCTATACTACCTGTTTTAACAATCATAAAATAAACTGATCAGACACACGCAGCAAACAAATAGAGAGGACTAACACTTCCATTGATGCTGCTGCACAACTGCTATGACACAAAGTTCAGAGCGAAATCTGCTGAATGGTAAGTATAACTGACAGACCCAAAGGCTAAAATTATGTCACTGATATACTGATACGTGGACGTAGTAAAGTGGGACTTAAATATCAGTGACTTAACAGCAAGCTGCACAAGCCACTAAATACGCGCGGCTTAGCAAACTTTGCAAATGCGCGTGTATTTAGTGACTTATTGTCAAAAAAAATATCACAAAATTGAGACCAAGACACAAACTAACTACTGTACTCCAGTTTAGAGACAAATCAAACCCGTAACCATAATTACCATTCCCGTGGGCGTGGACAGTGGAGGTGGAAGCCGCGAAATACTAGTGAAAGACAGGGTGTTGTGCGTAAAAAGCTCACAGTCTCACACTGTCACACAGGATTCTCCCTTTCCGCAGGCAGGAGGAGACGCTGGGACTGGGTGGGTACCCTCCGCCGCCGGCTGCCGCGGCTACCTCCCCTCTTCCTTCCCTCCTCTCTCGCATCCACGCGACAGATCAAACCAACCACCCCCACTAATCGAATCCCTCACCCGATTGCCCCGACCACATCGCCGCCGCCGCGGCCGATCCGACCCCGCGAGCGAGGTAGGGAGGCGCCCCTCATCTTCCTCTTCCTCGCCCCCTTTTTTTTGTTTCCTGTTCATGCGGTTTCTAGCGGCGCCCGCGCGCTTAATCTCTCTGCCTGATCGGGTGGAGTTCTAGGAGTCCGCGTGTTGTACTGACAAACTCTCAGCCGTTTGCTCCTTGTTTAGGCATGTTGTTCTAATTGTTGCGTTGCATTTTGTACGTCCTGGATGAAAGGAAATCGTAGGATAGTTCTTGATCTGTTGTTATACTATTGACCAAATCGTATCTAATATCGATCGTCTGATGTACCTTTAAAGCCATACGGTATTGTCTCGTGTTGGTATGGTTGGACTTGGACCTGTCGACAGCAAAACCTTTATTTCTCCTTGAAATGGCAACTACGATACTGAGTAATCTTTAGTTCCATATCTAGTTGCTGGATTAGCTGCTGTCTTTTTTGTGCTTACTGCTTAGAGCATTTGTAACTTGACACACCTTGGTTGCTCATTGTATCACGTATTATACTGTATTTGTATGTATGTATGAAAACTGATATATGATGATGGATAACGAAATATCATGTTAGATCACATTCTTAAACGTGCTTTTCCCTTTTTAGTTACTTCTCCTCTAGTTAAAGCATGTTAACGCTTCTCAACAAGATAGATTTGGCGGTTTAGTTGTTATGTGGAAGATGGAACACCATATTTATTTTTATTTTGTTCCTTGCTGTGATAATAATAAAAAAGTTCTCTAGTTATGCTGCTTATAAGTTTAGTCATGGAAAATCTCCCATTTCTTGTTGAATGGAATCTCTAACACTTTTCCTATTGTTCTAAGTACATCATTGAGATCAGGCATGAGAAATAGTGTTATAGCATATCATATTCGCCTTCCTCATTTGCTGTATACAAGTTCAATGCGCATTTTCTTAAAAAGTTTTAGTTAATCATGAAAATAGCTTGTATTGTTAAATTTTTATTGAATAGCTTTACTTCTAAGCCACTTCTTGCTCAATAATGTTTTTCTTCCTCTAATGACAACAGAACCGAAGCCAATATGGCTGCCTTGCCATTAGCCACCGCTGAAGTATGTGATGCAAATGCAGATTTAATCATGAATGGTGAGCTTCGTGCTCTCCAGCCCATCTTCCAAATCTATGGAAGGCGGCAGGTTTTTGCTGGCCCTATTGTGACACTGAAGGTCTATGAGGACAATGTTCTTATCCGTGAGTTCCTTGAGGAGAAGGGTCATGGAAGGGTTCTCGTGGTTGATGGTGGTGGGAGCTTGCGCTGTGCCATTTTGGGTGGCAACCCTGTGCAGCAGGCACAGAACAATGGGTGGGCTGGCATCGTCGTCAATGGTTGCATCAGGGACGTGGATGAAATCAATGGCTGTGACATTGGTGTCCGGGCTCTGAACTCACATCCTATGAAGGCAAACAAGAAGGGAATAGGTGAGAAGCATGTGCCTGTGACCATCGCAGGGACCAGGATTTGCGACGGTGAGTGGCTCTATGCAGATACCGATGGCATTCTCATCTCGAGGACTGAATTGACTGTGTAAACCTCTCTGTGTGTCTGTGTATGACAATTCAGAGCATAAAAAGGAGTTCTGCTTTCGCTCTCTTGTGTGTAATATCTACAACTGTAATAATGTACTATTAAATTAAATGAACACCTGGAATAATTGATGCCTCTATTTTGTTGTT
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| CDS seq | ATGAGGAAGGCGGCGGCGCTGGCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGGCAACGTCGGGCGGCGAAGCGGTCGGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAGGAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAGATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTTGACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACAAATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGACTCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGATTTTGTTGCTGCGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGACGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGGATCATGATACTATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCAATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATACATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATCTGATCTCAGAACAGTTGCCAACAAGTTGAAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTTTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGCAGGAGGAGACGCTGGGACTGGGTGGGTACCCTCCGCCGCCGGCTGCCGCGGCTACCTCCCCTCTTCCTTCCCTCCTCTCTCGCATCCACGCGACAGATCAAACCAACCACCCCCACTAATCGAATCCCTCACCCGATTGCCCCGACCACATCGCCGCCGCCGCGGCCGATCCGACCCCGCGAGCGAGCCAATATGGCTGCCTTGCCATTAGCCACCGCTGAAGTATGTGATGCAAATGCAGATTTAATCATGAATGGTGAGCTTCGTGCTCTCCAGCCCATCTTCCAAATCTATGGAAGGCGGCAGGTTTTTGCTGGCCCTATTGTGACACTGAAGGTCTATGAGGACAATGTTCTTATCCGTGAGTTCCTTGAGGAGAAGGGTCATGGAAGGGTTCTCGTGGTTGATGGTGGTGGGAGCTTGCGCTGTGCCATTTTGGGTGGCAACCCTGTGCAGCAGGCACAGAACAATGGGTGGGCTGGCATCGTCGTCAATGGTTGCATCAGGGACGTGGATGAAATCAATGGCTGTGACATTGGTGTCCGGGCTCTGAACTCACATCCTATGAAGGCAAACAAGAAGGGAATAGGTGAGAAGCATGTGCCTGTGACCATCGCAGGGACCAGGATTTGCGACGGTGAGTGGCTCTATGCAGATACCGATGGCATTCTCATCTCGAGGACTGAATTGACTGTGTAA
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| Protein seq | MRKAAALASAAMAAAAVAVVSTVLHQRQRRAAKRSERAEAVLLRDLQERCAAPVELLRQVADAMAAEMRAGLAAEGGSDLQMLVTYVDSLPSGGEKGMFYALDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAAALAKFVASEGEDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRRQGLDMKVTALVNDTVGTLAAGRYVDHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNMMAQETRIFGDNIPPKLERPYILRTLDMLIMHHDTSSDLRTVANKLKEVLGIEYTSFTTRKLVLDVCEAIATRGARLAAAGIYGIIQKLGQHSDSPSTRRSVIAVDGGVYKYYTFFSQCMESTLSDMLGQELAPFVMIKHVNDGSGVGAALLAASYSQYHQAESADSRRRRWDWVGTLRRRLPRLPPLFLPSSLASTRQIKPTTPTNRIPHPIAPTTSPPPRPIRPRERANMAALPLATAEVCDANADLIMNGELRALQPIFQIYGRRQVFAGPIVTLKVYEDNVLIREFLEEKGHGRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPMKANKKGIGEKHVPVTIAGTRICDGEWLYADTDGILISRTELTV |
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| Function | Hexokinase-9 [UniProtKB/Swiss-Prot:Q2KNB7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0031170 | OsARC_01g0031170.02 | Chr01 | 30425264 | 30431469 | + | NAM | ||
| CDS seq | ATGAGGAAGGCGGCGGCGCTGGCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGGCAACGTCGGGCGGCGAAGCGGTCGGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAGGAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAGATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTTGACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACAAATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGACTCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGATTTTGTTGCTGCGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGACGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGGATCATGATACTATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCAATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGGTGACACTTGACATGCTGATCATGCATCATGATACATCATCTGATCTCAGAACAGTTGCCAACAAGTTGAAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTTTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGCAGGAGGAGACGCTGGGACTGGGTGGGTACCCTCCGCCGCCGGCTGCCGCGGCTACCTCCCCTCTTCCTTCCCTCCTCTCTCGCATCCACGCGACAGATCAAACCAACCACCCCCACTAATCGAATCCCTCACCCGATTGCCCCGACCACATCGCCGCCGCCGCGGCCGATCCGACCCCGCGAGCGAGCCAATATGGCTGCCTTGCCATTAGCCACCGCTGAAGTATGTGATGCAAATGCAGATTTAATCATGAATGGTGAGCTTCGTGCTCTCCAGCCCATCTTCCAAATCTATGGAAGGCGGCAGGTTTTTGCTGGCCCTATTGTGACACTGAAGGTCTATGAGGACAATGTTCTTATCCGTGAGTTCCTTGAGGAGAAGGGTCATGGAAGGGTTCTCGTGGTTGATGGTGGTGGGAGCTTGCGCTGTGCCATTTTGGGTGGCAACCCTGTGCAGCAGGCACAGAACAATGGGTGGGCTGGCATCGTCGTCAATGGTTGCATCAGGGACGTGGATGAAATCAATGGCTGTGACATTGGTGTCCGGGCTCTGAACTCACATCCTATGAAGGCAAACAAGAAGGGAATAGGTGAGAAGCATGTGCCTGTGACCATCGCAGGGACCAGGATTTGCGACGGTGAGTGGCTCTATGCAGATACCGATGGCATTCTCATCTCGAGGACTGAATTGACTGTGTAA
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| Protein seq | MRKAAALASAAMAAAAVAVVSTVLHQRQRRAAKRSERAEAVLLRDLQERCAAPVELLRQVADAMAAEMRAGLAAEGGSDLQMLVTYVDSLPSGGEKGMFYALDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAAALAKFVASEGEDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRRQGLDMKVTALVNDTVGTLAAGRYVDHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNMVTLDMLIMHHDTSSDLRTVANKLKEVLGIEYTSFTTRKLVLDVCEAIATRGARLAAAGIYGIIQKLGQHSDSPSTRRSVIAVDGGVYKYYTFFSQCMESTLSDMLGQELAPFVMIKHVNDGSGVGAALLAASYSQYHQAESADSRRRRWDWVGTLRRRLPRLPPLFLPSSLASTRQIKPTTPTNRIPHPIAPTTSPPPRPIRPRERANMAALPLATAEVCDANADLIMNGELRALQPIFQIYGRRQVFAGPIVTLKVYEDNVLIREFLEEKGHGRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPMKANKKGIGEKHVPVTIAGTRICDGEWLYADTDGILISRTELTV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0031170 | OsARC_01g0031170.01 | Chr01 | 30425264 | 30431469 | + | NAM | ||
| CDS seq | ATGAGGAAGGCGGCGGCGCTGGCGTCCGCGGCGATGGCCGCAGCAGCAGTAGCGGTAGTCTCCACGGTGTTGCACCAGAGGCAACGTCGGGCGGCGAAGCGGTCGGAGCGCGCGGAGGCCGTGCTGCTGCGGGACCTGCAGGAGCGGTGCGCCGCGCCGGTGGAGCTGCTGCGGCAGGTGGCGGACGCGATGGCCGCGGAGATGCGCGCGGGGCTCGCCGCCGAGGGCGGGAGCGACCTCCAGATGCTCGTCACCTACGTTGACTCCCTCCCCTCCGGGGGTGAGAAAGGGATGTTTTATGCACTTGACCTTGGAGGAACAAATTTCCGTGTTTTACGAGTTCAATTAGGAGGCAAAGAACGTCGAATTATCAAGCAAGACTCAGAAGGGATATCCATTCCACAACATTTAATGTCCAGCAGTTCACATGAGTTGTTTGATTTTGTTGCTGCGGCTTTAGCAAAATTTGTTGCCTCTGAAGGTGAAGACTGCCATCTTCCTGAGGGTACCCAAAGAGAACTAGGTTTTACATTCTCCTTTCCAGTGAAACAAAAATCATTGGCATCTGGCACTCTTATCAAGTGGACGAAGAGTTTTGCAATTGATGAAATGGTCGGCAAGGATGTTGTGGCTGAATTAAACATGGCTATCAGACGTCAAGGACTTGATATGAAAGTCACAGCATTGGTTAATGATACAGTAGGGACATTAGCTGCTGGGAGATATGTGGATCATGATACTATTGCTGCTGTTATACTGGGAACAGGTAGTAATGCAGCGTACATAGATCATGCAGATGCAATTCCAAAATGGCATGGATCCCTGCCCAAGTCTGGAAATATGATGGCTCAAGAAACTCGCATTTTTGGTGATAATATACCTCCAAAACTTGAGAGACCATACATCTTAAGGACACTTGACATGCTGATCATGCATCATGATACATCATCTGATCTCAGAACAGTTGCCAACAAGTTGAAAGAAGTCTTGGGGATCGAATATACCTCTTTCACGACGAGGAAACTGGTTTTGGATGTTTGTGAGGCCATTGCGACACGCGGTGCACGGCTTGCTGCTGCTGGGATATATGGCATTATCCAAAAGCTTGGTCAGCATTCTGACAGCCCCAGTACGAGAAGGTCCGTGATTGCTGTGGATGGAGGGGTCTATAAATACTACACTTTCTTCAGCCAGTGCATGGAGAGCACTCTGAGTGACATGCTTGGGCAGGAGCTGGCCCCCTTTGTTATGATCAAGCATGTCAATGATGGCTCAGGCGTTGGGGCAGCTCTCCTGGCAGCCTCTTATTCTCAATACCACCAGGCTGAATCTGCAGATAGCAGGAGGAGACGCTGGGACTGGGTGGGTACCCTCCGCCGCCGGCTGCCGCGGCTACCTCCCCTCTTCCTTCCCTCCTCTCTCGCATCCACGCGACAGATCAAACCAACCACCCCCACTAATCGAATCCCTCACCCGATTGCCCCGACCACATCGCCGCCGCCGCGGCCGATCCGACCCCGCGAGCGAGCCAATATGGCTGCCTTGCCATTAGCCACCGCTGAAGTATGTGATGCAAATGCAGATTTAATCATGAATGGTGAGCTTCGTGCTCTCCAGCCCATCTTCCAAATCTATGGAAGGCGGCAGGTTTTTGCTGGCCCTATTGTGACACTGAAGGTCTATGAGGACAATGTTCTTATCCGTGAGTTCCTTGAGGAGAAGGGTCATGGAAGGGTTCTCGTGGTTGATGGTGGTGGGAGCTTGCGCTGTGCCATTTTGGGTGGCAACCCTGTGCAGCAGGCACAGAACAATGGGTGGGCTGGCATCGTCGTCAATGGTTGCATCAGGGACGTGGATGAAATCAATGGCTGTGACATTGGTGTCCGGGCTCTGAACTCACATCCTATGAAGGCAAACAAGAAGGGAATAGGTGAGAAGCATGTGCCTGTGACCATCGCAGGGACCAGGATTTGCGACGGTGAGTGGCTCTATGCAGATACCGATGGCATTCTCATCTCGAGGACTGAATTGACTGTGTAA
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| Protein seq | MRKAAALASAAMAAAAVAVVSTVLHQRQRRAAKRSERAEAVLLRDLQERCAAPVELLRQVADAMAAEMRAGLAAEGGSDLQMLVTYVDSLPSGGEKGMFYALDLGGTNFRVLRVQLGGKERRIIKQDSEGISIPQHLMSSSSHELFDFVAAALAKFVASEGEDCHLPEGTQRELGFTFSFPVKQKSLASGTLIKWTKSFAIDEMVGKDVVAELNMAIRRQGLDMKVTALVNDTVGTLAAGRYVDHDTIAAVILGTGSNAAYIDHADAIPKWHGSLPKSGNMMAQETRIFGDNIPPKLERPYILRTLDMLIMHHDTSSDLRTVANKLKEVLGIEYTSFTTRKLVLDVCEAIATRGARLAAAGIYGIIQKLGQHSDSPSTRRSVIAVDGGVYKYYTFFSQCMESTLSDMLGQELAPFVMIKHVNDGSGVGAALLAASYSQYHQAESADSRRRRWDWVGTLRRRLPRLPPLFLPSSLASTRQIKPTTPTNRIPHPIAPTTSPPPRPIRPRERANMAALPLATAEVCDANADLIMNGELRALQPIFQIYGRRQVFAGPIVTLKVYEDNVLIREFLEEKGHGRVLVVDGGGSLRCAILGGNPVQQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALNSHPMKANKKGIGEKHVPVTIAGTRICDGEWLYADTDGILISRTELTV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0031170 | OsARC_01g0031170.03 | Chr01 | 30429713 | 30431614 | + | IsoSeq | ||
| CDS seq | GATTCTCCCTTTCCGCAGGCAGGAGGAGACGCTGGGACTGGGTGGGTACCCTCCGCCGCCGGCTGCCGCGGCTACCTCCCCTCTTCCTTCCCTCCTCTCTCGCATCCACGCGACAGATCAAACCAACCACCCCCACTAATCGAATCCCTCACCCGATTGCCCCGACCACATCGCCGCCGCCGCGGCCGATCCGACCCCGCGAGCGAGAACCGAAGCCAATATGGCTGCCTTGCCATTAGCCAC
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| Protein seq | DSPFPQAGGDAGTGWVPSAAGCRGYLPSSFPPLSHPRDRSNQPPPLIESLTRLPRPHRRRRGRSDPASENRSQYGCLAISH |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr01 | 30429921 | 30430958 | + | OsARC_01g0031170.03 | OsARC_01g0031170.03,OsARC_01g0031170.01,OsARC_01g0031170.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.062910 | 1.178914 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0722800 | RBH | 1.268830 | 2.609510 | 8.185459 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g52460 | RBH | 0.752716 | 1.520240 | 1.898546 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0722800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0031990 | RBH | 0.876162 | 39.327877 | 8.816210 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0031510 | RBH | 0.441480 | 7.090747 | 3.886050 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0031960 | RBH | 1.816234 | 47.624050 | 3.368839 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0024560 | RBH | 0.000000 | 0.222385 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0030850 | RBH | 10.645543 | 20.742016 | 13.743395 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0500300 | RBH | 1.3438255 | 19.141289 | 13.7311195 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0030580 | RBH | 0.341515 | 4.290277 | 2.372913 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0492700 | RBH | 7.4399805 | 14.2604945 | 18.9900685 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0030820 | RBH | 0.313914 | 0.193597 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0030850 | RBH | 1.896610 | 6.681996 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0031050 | RBH | 10.641765 | 63.883244 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0031240 | RBH | 0.385779 | 3.586981 | 2.715954 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0031000 | RBH | 0.683254 | 25.985268 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G031450 | RBH | 0.536951 | 8.121812 | 2.572074 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0031100 | RBH | 0.572876 | 37.041027 | 26.103643 |
