Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsARC_01g0019920 | OGI:01063570 | 16/16 | ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | Chr01:20158216-20165870 | ||||||||
| Gene Symbol | OsPP2C04, PP2C04, OsPP2C4, PP2C4, OsPP8 | ||||||||||
| DNA seq | ATGGAGTGATCGTTTGTTGTACAGGTAACAGGTCAGCTTCGCTGTAATGTGATCAAGTTTTTATATTTGAATATAGGTACCAGGTTCCTTAAGTGTACAGCATCATTGTTGCGTAGACTTAATCCACGATTGTGGTTTGTACACAACATTAATGTGAAGACAATGATAGAAAAAAAATATTTTAAGTCGGGTTATTTGACCTTGCATGAATGCATGAGATATCTCGTGACAGTTACTGTATTTATTAAGATAAGTGCACTTGGGACCAATAATTATTTTTCACGTGCCTCACGGCTTGGCAACGACAGGTTGCCTCCGGATTATCCGTATTTGACGAACAAAATTTCGGTACCTGTATGAATCATTCAACGATTTCTAGCAGGTGTTGATACGAGGAACTGGAAACATTTAAACTTGGACCATCGACAATTTCACAAAATTTTATTGAGATAAGTATTGAATAAATATGGTGGAAACATTTAAAGTTGGACCATCGACAATTCCACAAAATTTTATTGAGATAAGTATTGAATAAATATGTTTTGTTCTTTTGGCCTGGAAGGTGCACAAATGAGATGAATCAGAGTTGCATAAACATTGACCAATGAAAGAATGCTATATCTCCTATCAGAAAGATTAATCATCTTTCTGCCCTAGACAGGGTAATCAGCAAATCCAATTTGTGTACAAGAACGAATCGGTGGCTTCTTTCCTTTACAGTGGTGATAATAGTATCTAAAAATTCTGACAAATGATGAAGTTACCAACAAGGCTTTGTGGTTAGTATATTCGCTCAGCAGTGGAGACGGGGCGAAGGAACACAACGATGACAGTGATGTTGTCCTTGCTGCCACGCGCTGCCGCCTCCGTGGCCAGCCGCTTGGAGCACATTCCAGGCTCTTTTACTGTGTCCTTGATGATGGACAGGACATCCTCGTTGCTCATCACGTCCCACAATCCATCACTTGCCATCACCTACAGGTAACCAAATGAAGTGGTGTGAATCTATAATGAGGTTTCTTATCTTTGATGCCATGTTTCAGTGCATCTCTTGGGTGTTCGCAGAAGCACCAAAACTAGATACCCTGTTTTGAGGTTCATCTCTAGAGTATTATGTATGAAGTCGAAACTTTGCAATGACCTCTCTTTTTTGAATGGTGGTGTTTACATTAAATTAGGAACAACACAAATATACATATTAGAAGCATAATGCCCAATAACGTTGAAAGAGTTTCATTGCAGCCAAGCAGAGCCAGGCATGTTGAGGGGTTTCTCAAAGAAACGTAGTTTAGTTACTTCCCTAACAAATAATTAGAAAAAGTAATTTGCCCATTCAATGCAGATAATAGAAATTTTGGAGAAGTAAATAATACTGGATCTCTGATATCATTATAAGATATGAAAGCAAAATAAAGAAAAGGGCCATTGGTCTATTTCTCAGAACTTAAGAATTTTCATACATAGGCTTGGATTTACTACTATATTTTGGTGGCAGTAATTGCTCAGTGTTCTACAAGGGAGAAATAAAGGTATTGCTTGGCTGAAATAAGACAAGCATTCACAGCCAAACTTCCGAAGCTGATGCCAATCATTCAACTGAACAGATTAACAGCGATCGAACAATAATGACATAATAATTTTTATGCCACACTGGTGTTAGCTTTGGTATTCTAAGATATAACAAATTGATGTATGAGAATGAAAGAAACCGCACAGATGAGAGAAACAAAATGGACATACCAGGAACTCATCATCAGGTGATAAAATGGTTTCTATAACCTCAGGTTGTGCTGTGACTGCTGGCTTAAGATCATCATCGCCAATGGACCGTGTGACCTGTCAAAAAATAACCACTCGTTTGTGTAAACTACAGACCTTACGGTTATCCTTTTATTTCTGCAAGAAATAGTATAATTACGCCGATGCAAGTGTCAAGGGATCGTTCATAGTGTGCAAAAGCATAGAATGATTTTTTTTTTTTGGGGGGGGGGGGGTGGTGGGGGGTGTTGGGGGGGGGAGGTGGGGATAAGAACGAATAATATTCCCAAACCAATTAACCCAAGTAGAATCTTGGGCAGAGTAGCGTATGTATCTGTGGTTGGACCTCAGCAAGGTAAGCTTGAAATCCATGCCCTTCTTTGGACACTGTGTGCTAGCATATACCTTGGCTGAGTTCCAATAGGCATTTCCGTATTGTATTATTCATAGTACAGAAAGGAATATTGCTTGCTGTTTACGTAGCTGACAACCCCATTTGCAGAAACAGCATAATATCACTTCAACAGTTCTAAAACCAACTGAAAAAAAACTCATGGATAGAGGGCGTATAATGTTATGTGAGCATTTTTTTTTTCTATTGTTATCAAAATTAATGATTATATCATGCATCTACAGCTAATCATGGCTACCATAGTGAATGATACTCATGCGAGCACATGCCATAAAGAGCAAAAGCTAGCACCTGAAGAGCAGCTGCACCAACACGCCATGTATCTATTTGCCATTTGACTTCAGTTCCTTCCTTTACAATCCGTTCTCTTTCCTTTGGACAACTAGCAACATGATCCTACCAAGGCAGAATGAAAACATATCTTATGTTATAATGCTTAAATTTCAAGAAGCGTGCAAAATAAAGAAGAAATATTATGCGGACCCTGGTCATAGGAAATGGTTCACCAGCACGGTTCAGAATTGCCCGGCAATCACCAGCATTCGCTACAAAAAGCTTGTTTCTCACTATCAGTGCTGTCACTGCCGTGCAACCAGGATGCCAATTTTTCTGGGTTATCCTTTTTGACTTCTGGTGAAGAATTAATTCCTCTCGAAATGCTATGTCAGTCCTTACAAATGCTTCTGTAAGGGCATCAGTTGGGCTACGAGAAAACAGAAGTCAGATTGAGACTTCAGGCATGAAAAATGTCATCAGATTGTTTGCATTCATTCCATACCTTGTATTGGAATTAAACTGTTTGAGAAAACCAGGGACTGCTCGAACTGAGAACTCAGCAGCTGCTGAACCTGTAGAAATTGTGGTGTAAGATATGGTAATGCAAAAGTTAGTAAAGAACATTGTCAATTGTTGAGTTGTAGACCTCTGTGACCATCAAAAATGCCAAATGCATGCAGATCCTTTTCTTCGCTCATGTGGGGAAGCATAAAATGGGTATCTTCCATTGTTTCTCTTCGACCACATGTTGCAAAAGATCCCCAACTTAATGTTGGACAGTACTTAGAGGACTGATCGAAAATATCAGACCAATGGTCAACTGTACTGTCCAATTTGTTTCCTTTTGCAAACAACTCCCCTTGGTTCAACCAGCTCAATGCTTCTTGATAGTGGTGAACTTCTGTGTTGCCATTTTGACTCTTGTTTGCAGGAGATGCTAGTGAGCAAGAATTTACAGCTATATGCTTTTCAATTATTTTTAACTCTTCAGTTATATCTTTAAATGATGGTCTCTGTTGAGGATCAGAGTCCCAGCATCGCTGGATAAGTGACAAGAGGCTAGGTGGAGCACCAGACTCAGGAAGGGCAAGAGCTGGGCGCAATCCTTGAGAAACAATTGCTGCTGTAAGTTGTTGTTCGGTGTAAGTCATTTCAAGAACGGTGTGTGCCTAGAGAAAAATCAATGAGTTCCCAATTGTAGAAAATAGTGTATCTCACATGTTTGCTTCAGCAATGGCATTATATACGTAATTAAAGCTAATACAGGGCTAGAGGCGCACATGCATGATTGTACAACCAATCATATATGAAGATAAATGATGCTATAATTTCAAGTATTTGGATATAACAGAAATAGTCAACAGGAACTAAAGATTATAGCAAACAACCCAAATTTCTAAATGGGGTAGAATGTCAAAGCACTTAATGTACCTTTTCCATTAGGGCAGCATGAAATAAATGGTATTCAAGTGTGGGGATGGCTAGATGCATGTCCAATTAGAATTTTTAACAAAATGATGTTATATAATTTAGAAACCATACACAACAACCTGTGCTGTTGGAGTGAAAATGTGAAAGAGACAAAGATAAAGAACAAAAAATACGTACCTGTGCTTCTGCTCGTAGGTCTGTATAAGGCACCACACCCGTAAGTAGCTCACTGTAAATTGATGAAAAAAAAATGAAACTGTTAATACATGAAAACCTAAGCTAGTTGAGTATTTTCATTTGTTTTGAATTTATTTTATGTACACAGGGTAAGAAAAAGCCTGAGAAAGAGTGGGACAGAGTGTGCAAGTAACATTTGGAACCATGCAGCTTTGTTTCAAATGAGCATTTCACATCAGCTGGCCAAAGTATACAATTAGTATAATTTAGCCAAATGTGTCCCTCGTCCCTTTTAAAGTCATGTTATTATCAGTGGAAGTGAAATCCGTAATGTTCACAGTTCAACAGAAGCAGCATGTGTATGCAGATGAGTATACTGTGTTGTCACCAAAACCAGGTTGCACGACTAGATATGCAGCTAGATATAGTCAATCAGTCACCATGTCAAAGCATTTATTAAAATTTAAAAGTTAAACTTGTATATATTTTCTTGCAGGACTTAACAAGACATGATCATAACACAATAAAAATTGGTTGATTGGTTGCTTATCTTAATACAGTGCTAATATCACTGCAAGCCACACAACCAAAATAAAACGTGATTTATATGAACTAGTATTCAACAACAGAGAACAAAATGATAGGAATATCACATTTTGTGATCATGGCCCTTAGTTACAGATATGAGAGAACATTCGTGTAGGTTTCCATGTCCAACATTTGTTCAACATGGAATATATCTCCCCGCACAAAAAAAAATAGAATACATCACCTAGCAGAAGTGTATATGTAATGCAAGTCTATATGGGAAACACCAAATCCTCCAACACAGAAAAGGCAATTTACCTCCAAGCAACCATCTACATATGTGCGTGGACTGGTTATATGGTACTTAACAGAAACAGAGGCAATATGTCATGCATACCACCAAGAAAACACAAACGTATTTTCTCAGGCAATGGAGTACACATTTGAAGTATATGAGGCCAAACTGCAGTTAATACCAAGAGAGAAATGGCTTACTTGATAGATATTGCAAAGCTATATACATCTGATTTCTCTGTATGTATGTCCTTTCTCAAAATTTCTGGTGCCATGTATATTAATGTCCCAACCATGTTCTTTTTATGGAAACCACCAGTAGGCTTGCCAGATGATCTCCAGTTTTCAACTGAAACATGCTTGATGTCCTTCTGGTACATGGCTAAGCCAAAATCTGCTAAATGTGGATGGAAGTCCTTATCTATCTGTACACAATTATTAGACTTTGTTAATGTATGTAGAAATGCATTATGTGTAGAACTTAAATCATTCAATATAGAAGACAAAATTACCAAAATGTTTGCAGGCTTTATATCTCTGTGTACTATGCCAAGGATGTTTAGGTATTGGAGAGCCTTTGCTGCAATATACATTGAAAATAAATGTTAATTTGCGCTTTATCAACAACAGATGTTCAATTCAAGTTAGAGCCAGCAAGAAACTTCGAATTAGAATAACAAACTAAACACAATGACATATTTCTCATTCTGAATTAGTAAGAACTAATTGTTCATACTTGGTTCATGGACTTTAAGAAGATCTTACTATCATCCTCTTATCTATATTTCAGGAGGAATATTTTTGTTTTTATTTCACCTAACATTCAGGGGGGAAATTAGCTATCCATGAATTAATTTTACATTTGTGCATTCGGTTACATAATAAGCACCGTACCACAAAAGGTTAGCAGAGAAATACAGTGGTATATTAATAAAAAGGAAATGAAAAATCGTTCAAAAATCGCTACATGTGAAAGGACAAAAATGATAGGGAAAAATTCGGTATTTTCAACAGAAATGCTGCAAATGTGTCGGAAACATTTATCGTGCCATTATTTACTCTAAGATCAAGAACAAGGGTTTTCAGAATATATCTGCATTGAAAATACTACATGACCATTGCAATCCTGATCCTAGCCATATAAAATAGTGATCTAGAGCATATGAAAGCAATTCTGCGTAGGATCCTGATCTTAATTACCTTACTTAAAATTGCTAGCACAAAAGAACATAACCAAGTTACACCCTCACTAGTTTCTAAAAGAAGTCACTAAACGCAGTAGATAATATTAAAGTTATATTGAGAAATAGAAAATGTTCATGTAGGCCAGAACTCACATGTTAATAGAGTCCAGAATACGTATGATACGATGACAAGAAATCATCGCGTCAAGCTCAGAAGTGATACAGGAGTTAAAAAGTTGCTTAATTGCTTGAAACAAGTGGGGAACTGCCAACTCACGATTGAATCAAACATATCAAGATGGGTCCTAAAACAACAGCATTCCCGGTTTGAAGGCAGCCATGTTTTATGTCTTATTCTAATATAGAAAAGAAACATACACATGACACGATTCAATCTCTCAAAGAGTAAAAGGAAACTTGATTGCAATAAATTGGGACCTAGATCAGTGGCAATGGTGACCACTTGCTGCACAGAAGGGTTCCACTCCTCAACATGTATCTTGTCCGCAAGGTTTGGAGGTTCAAAGAAATCAAAGAACATCAAGTAATTCGGAGGACGTGCATGTGCTGCGACCAGTCTCGCCAACCCTGGGTGATCCAGTTCACTGCACAGACATAGACCCATTTTATTTCAATGAACCTGTCAAGAGCAATTCTTGAAGAAGTATGTTTTCACTTATTCAGGATATAAACAACCATTTTCAAGCCAAGAGTTGAAAGCTGAAATGATAGTTTGCAAGTTTTACAAGCGTTACATGTCATAATTACAAGTGTCAGCAAGTATCCAAGAAACTAAACTCCCTGCTTTTCATCATGAAATCAATCAATATTTGCAACAGCTTAAAGCTACCATATACTATTGCATAAGGGTTCGTAATTAACACTCTGTTTGCACCAAAAGATTACCGCCTAACGATCAAGCAATAATGGAACACAAGCACTGGTCAGGTGGTCATCCTGACTCACCGATAAATTTATGATCACAAGTCTCTGCCAAGCTATAAAATGCTAGCTATTCCATCGGTTATGAGCGCTAACTTCCATCTCGAGCATCAGCAACCCAAACGACAACAGTGAGAGAAACTCGACAGGCAACGGAACAAACATGGGGAGTACCCACCAGAGCAGCTGCAGCTGGTAGTGGAACTTGTCGAGGTCGTCGGAGGTGGACAGCACGGGCTTCTTGGCCGCGACGCGCTCGCCGCCCAGCCGCGCCTCGTACACCGTGCTCTCCGACCCTGCGCGCGGCACATTCCATTTTCCTCGTCAGAACTAGTAGAGCGTAGAGAGAGAGAGAGAGGATTTAGTTACCTTTGGCGATGGGGGAGAGGAGGGAGAAGGAGGAGGGCGGGAGGTGGAGCGGGATGGCGGCGCTCCGGCAGCACCCGCGCACGCACCGGTTGGACTCCTCCGGCGGCACCTCCACCCCCATCTTCCTCGCCGCCGCCGCCGCCGCCGCCGCCGCGGGAAGACGAATCGAACACGGCGGTGGCGGAGGAGGCGATCAGGCGGATTCAGAAGGGAAATCGTATGGGCTGTGCCTGTGGACGGGGCAGGGGCGGCGTGGCGAGGAGGCGGCCAACGACTCGAGAAAT
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| CDS seq | ATGTTCTTTGATTTCTTTGAACCTCCAAACCTTGCGGACAAGATACATGTTGAGGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAGCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAAGCCTGCAAACATTTTGATAGATAAGGACTTCCATCCACATTTAGCAGATTTTGGCTTAGCCATGTACCAGAAGGACATCAAGCATGTTTCAGTTGAAAACTGGAGATCATCTGGCAAGCCTACTGGTGGTTTCCATAAAAAGAACATGGTTGGGACATTAATATACATGGCACCAGAAATTTTGAGAAAGGACATACATACAGAGAAATCAGATGTATATAGCTTTGCAATATCTATCAATGAGCTACTTACGGGTGTGGTGCCTTATACAGACCTACGAGCAGAAGCACAGGCACACACCGTTCTTGAAATGACTTACACCGAACAACAACTTACAGCAGCAATTGTTTCTCAAGGATTGCGCCCAGCTCTTGCCCTTCCTGAGTCTGGTGCTCCACCTAGCCTCTTGTCACTTATCCAGCGATGCTGGGACTCTGATCCTCAACAGAGACCATCATTTAAAGATATAACTGAAGAGTTAAAAATAATTGAAAAGCATATAGCTGTAAATTCTTGCTCACTAGCATCTCCTGCAAACAAGAGTCAAAATGGCAACACAGAAGTTCACCACTATCAAGAAGCATTGAGCTGGTTGAACCAAGGGGAGTTGTTTGCAAAAGGAAACAAATTGGACAGTACAGTTGACCATTGGTCTGATATTTTCGATCAGTCCTCTAAGTACTGTCCAACATTAAGTTGGGGATCTTTTGCAACATGTGGTCGAAGAGAAACAATGGAAGATACCCATTTTATGCTTCCCCACATGAGCGAAGAAAAGGATCTGCATGCATTTGGCATTTTTGATGGTCACAGAGGTTCAGCAGCTGCTGAGTTCTCAGTTCGAGCAGTCCCTGGTTTTCTCAAACAGTTTAATTCCAATACAAGCCCAACTGATGCCCTTACAGAAGCATTTGTAAGGACTGACATAGCATTTCGAGAGGAATTAATTCTTCACCAGAAGTCAAAAAGGATAACCCAGAAAAATTGGCATCCTGGTTGCACGGCAGTGACAGCACTGATAGTGAGAAACAAGCTTTTTGTAGCGAATGCTGGTGATTGCCGGGCAATTCTGAACCGTGCTGGTGAACCATTTCCTATGACCAGGGATCATGTTGCTAGTTGTCCAAAGGAAAGAGAACGGATTGTAAAGGAAGGAACTGAAGTCAAATGGCAAATAGATACATGGCGTGTTGGTGCAGCTGCTCTTCAGGTCACACGGTCCATTGGCGATGATGATCTTAAGCCAGCAGTCACAGCACAACCTGAGGTTATAGAAACCATTTTATCACCTGATGATGAGTTCCTGGTGATGGCAAGTGATGGATTGTGGGACGTGATGAGCAACGAGGATGTCCTGTCCATCATCAAGGACACAGTAAAAGAGCCTGGAATGTGCTCCAAGCGGCTGGCCACGGAGGCGGCAGCGCGTGGCAGCAAGGACAACATCACTGTCATCGTTGTGTTCCTTCGCCCCGTCTCCACTGCTGAGCGAATATACTAA
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| Protein seq | MFFDFFEPPNLADKIHVEEWNPSVQQVVTIATDLAKALQYLNILGIVHRDIKPANILIDKDFHPHLADFGLAMYQKDIKHVSVENWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDIHTEKSDVYSFAISINELLTGVVPYTDLRAEAQAHTVLEMTYTEQQLTAAIVSQGLRPALALPESGAPPSLLSLIQRCWDSDPQQRPSFKDITEELKIIEKHIAVNSCSLASPANKSQNGNTEVHHYQEALSWLNQGELFAKGNKLDSTVDHWSDIFDQSSKYCPTLSWGSFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTVKEPGMCSKRLATEAAARGSKDNITVIVVFLRPVSTAERIY |
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| Function | Protein kinase and PP2C-like domain-containing protein [UniProtKB/Swiss-Prot:Q5JJY4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0019920 | OsARC_01g0019920.02 | Chr01 | 20158216 | 20165870 | - | NAM | ||
| CDS seq | ATGTTCTTTGATTTCTTTGAACCTCCAAACCTTGCGGACAAGATACATGTTGAGGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAGCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAAGCCTGCAAACATTTTGATAGATAAGGACTTCCATCCACATTTAGCAGATTTTGGCTTAGCCATGTACCAGAAGGACATCAAGCATGTTTCAGTTGAAAACTGGAGATCATCTGGCAAGCCTACTGGTGGTTTCCATAAAAAGAACATGGTTGGGACATTAATATACATGGCACCAGAAATTTTGAGAAAGGACATACATACAGAGAAATCAGATGTATATAGCTTTGCAATATCTATCAATGAGCTACTTACGGGTGTGGTGCCTTATACAGACCTACGAGCAGAAGCACAGGCACACACCGTTCTTGAAATGACTTACACCGAACAACAACTTACAGCAGCAATTGTTTCTCAAGGATTGCGCCCAGCTCTTGCCCTTCCTGAGTCTGGTGCTCCACCTAGCCTCTTGTCACTTATCCAGCGATGCTGGGACTCTGATCCTCAACAGAGACCATCATTTAAAGATATAACTGAAGAGTTAAAAATAATTGAAAAGCATATAGCTGTAAATTCTTGCTCACTAGCATCTCCTGCAAACAAGAGTCAAAATGGCAACACAGAAGTTCACCACTATCAAGAAGCATTGAGCTGGTTGAACCAAGGGGAGTTGTTTGCAAAAGGAAACAAATTGGACAGTACAGTTGACCATTGGTCTGATATTTTCGATCAGTCCTCTAAGTACTGTCCAACATTAAGTTGGGGATCTTTTGCAACATGTGGTCGAAGAGAAACAATGGAAGATACCCATTTTATGCTTCCCCACATGAGCGAAGAAAAGGATCTGCATGCATTTGGCATTTTTGATGGTCACAGAGGTTCAGCAGCTGCTGAGTTCTCAGTTCGAGCAGTCCCTGGTTTTCTCAAACAGTTTAATTCCAATACAAGCCCAACTGATGCCCTTACAGAAGCATTTGTAAGGACTGACATAGCATTTCGAGAGGAATTAATTCTTCACCAGAAGTCAAAAAGGATAACCCAGAAAAATTGGCATCCTGGTTGCACGGCAGTGACAGCACTGATAGTGAGAAACAAGCTTTTTGTAGCGAATGCTGGTGATTGCCGGGCAATTCTGAACCGTGCTGGTGAACCATTTCCTATGACCAGGGATCATGTTGCTAGTTGTCCAAAGGAAAGAGAACGGATTGTAAAGGAAGGAACTGAAGTCAAATGGCAAATAGATACATGGCGTGTTGGTGCAGCTGCTCTTCAGGTCACACGGTCCATTGGCGATGATGATCTTAAGCCAGCAGTCACAGCACAACCTGAGGTTATAGAAACCATTTTATCACCTGATGATGAGTTCCTGGTGATGGCAAGTGATGGATTGTGGGACGTGATGAGCAACGAGGATGTCCTGTCCATCATCAAGGACACAGTAAAAGAGCCTGGAATGTGCTCCAAGCGGCTGGCCACGGAGGCGGCAGCGCGTGGCAGCAAGGACAACATCACTGTCATCGTTGTGTTCCTTCGCCCCGTCTCCACTGCTGAGCGAATATACTAA
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| Protein seq | MFFDFFEPPNLADKIHVEEWNPSVQQVVTIATDLAKALQYLNILGIVHRDIKPANILIDKDFHPHLADFGLAMYQKDIKHVSVENWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDIHTEKSDVYSFAISINELLTGVVPYTDLRAEAQAHTVLEMTYTEQQLTAAIVSQGLRPALALPESGAPPSLLSLIQRCWDSDPQQRPSFKDITEELKIIEKHIAVNSCSLASPANKSQNGNTEVHHYQEALSWLNQGELFAKGNKLDSTVDHWSDIFDQSSKYCPTLSWGSFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTVKEPGMCSKRLATEAAARGSKDNITVIVVFLRPVSTAERIY
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0019920 | OsARC_01g0019920.03 | Chr01 | 20159630 | 20165870 | - | NAM | ||
| CDS seq | ATGTTCTTTGATTTCTTTGAACCTCCAAACCTTGCGGACAAGATACATGTTGAGGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAGCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAAGCCTGCAAACATTTTGATAGATAAGGACTTCCATCCACATTTAGCAGATTTTGGCTTAGCCATGTACCAGAAGGACATCAAGCATGTTTCAGTTGAAAACTGGAGATCATCTGGCAAGCCTACTGGTGGTTTCCATAAAAAGAACATGGTTGGGACATTAATATACATGGCACCAGAAATTTTGAGAAAGGACATACATACAGAGAAATCAGATGTATATAGCTTTGCAATATCTATCAATGAGCTACTTACGGGTGTGGTGCCTTATACAGACCTACGAGCAGAAGCACAGGCACACACCGTTCTTGAAATGACTTACACCGAACAACAACTTACAGCAGCAATTGTTTCTCAAGGATTGCGCCCAGCTCTTGCCCTTCCTGAGTCTGGTGCTCCACCTAGCCTCTTGTCACTTATCCAGCGATGCTGGGACTCTGATCCTCAACAGAGACCATCATTTAAAGATATAACTGAAGAGTTAAAAATAATTGAAAAGCATATAGCTGTAAATTCTTGCTCACTAGCATCTCCTGCAAACAAGAGTCAAAATGGCAACACAGAAGTTCACCACTATCAAGAAGCATTGAGCTGGTTGAACCAAGGGGAGTTGTTTGCAAAAGGAAACAAATTGGACAGTACAGTTGACCATTGGTCTGATATTTTCGATCAGTCCTCTAAGTACTGTCCAACATTAAGTTGGGGATCTTTTGCAACATGTGGTCGAAGAGAAACAATGGAAGATACCCATTTTATGCTTCCCCACATGAGCGAAGAAAAGGATCTGCATGCATTTGGCATTTTTGATGGTCACAGAGGTTCAGCAGCTGCTGAGTTCTCAGTTCGAGCAGTCCCTGGTTTTCTCAAACAGTTTAATTCCAATACAAGCCCAACTGATGCCCTTACAGAAGCATTTGTAAGGACTGACATAGCATTTCGAGAGGAATTAATTCTTCACCAGAAGTCAAAAAGGATAACCCAGAAAAATTGGCATCCTGGTTGCACGGCAGTGACAGCACTGATAGTGAGAAACAAGCTTTTTGTAGCGAATGCTGGTGATTGCCGGGCAATTCTGAACCGTGCTGGTGAACCATTTCCTATGACCAGGGTCCGCATAATATTTCTTCTTTATTTTGCACGCTTCTTGAAATTTAAGCATTATAACATAAGATATGTTTTCATTCTGCCTTGGTAG
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| Protein seq | MFFDFFEPPNLADKIHVEEWNPSVQQVVTIATDLAKALQYLNILGIVHRDIKPANILIDKDFHPHLADFGLAMYQKDIKHVSVENWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDIHTEKSDVYSFAISINELLTGVVPYTDLRAEAQAHTVLEMTYTEQQLTAAIVSQGLRPALALPESGAPPSLLSLIQRCWDSDPQQRPSFKDITEELKIIEKHIAVNSCSLASPANKSQNGNTEVHHYQEALSWLNQGELFAKGNKLDSTVDHWSDIFDQSSKYCPTLSWGSFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRVRIIFLLYFARFLKFKHYNIRYVFILPW
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsARC_01g0019920 | OsARC_01g0019920.01 | Chr01 | 20158216 | 20165870 | - | NAM | ||
| CDS seq | ATGTTCTTTGATTTCTTTGAACCTCCAAACCTTGCGGACAAGATACATGTTGAGGAGTGGAACCCTTCTGTGCAGCAAGTGGTCACCATTGCCACTGATCTAGCAAAGGCTCTCCAATACCTAAACATCCTTGGCATAGTACACAGAGATATAAAGCCTGCAAACATTTTGATAGATAAGGACTTCCATCCACATTTAGCAGATTTTGGCTTAGCCATGTACCAGAAGGACATCAAGCATGTTTCAGTTGAAAACTGGAGATCATCTGGCAAGCCTACTGGTGGTTTCCATAAAAAGAACATGGTTGGGACATTAATATACATGGCACCAGAAATTTTGAGAAAGGACATACATACAGAGAAATCAGATGTATATAGCTTTGCAATATCTATCAATGAGCTACTTACGGGTGTGGTGCCTTATACAGACCTACGAGCAGAAGCACAGGCACACACCGTTCTTGAAATGACTTACACCGAACAACAACTTACAGCAGCAATTGTTTCTCAAGGATTGCGCCCAGCTCTTGCCCTTCCTGAGTCTGGTGCTCCACCTAGCCTCTTGTCACTTATCCAGCGATGCTGGGACTCTGATCCTCAACAGAGACCATCATTTAAAGATATAACTGAAGAGTTAAAAATAATTGAAAAGCATATAGCTGTAAATTCTTGCTCACTAGCATCTCCTGCAAACAAGAGTCAAAATGGCAACACAGAAGTTCACCACTATCAAGAAGCATTGAGCTGGTTGAACCAAGGGGAGTTGTTTGCAAAAGGAAACAAATTGGACAGTACAGTTGACCATTGGTCTGATATTTTCGATCAGTCCTCTAAGTACTGTCCAACATTAAGTTGGGGATCTTTTGCAACATGTGGTCGAAGAGAAACAATGGAAGATACCCATTTTATGCTTCCCCACATGAGCGAAGAAAAGGATCTGCATGCATTTGGCATTTTTGATGGTCACAGAGGTTCAGCAGCTGCTGAGTTCTCAGTTCGAGCAGTCCCTGGTTTTCTCAAACAGTTTAATTCCAATACAAGCCCAACTGATGCCCTTACAGAAGCATTTGTAAGGACTGACATAGCATTTCGAGAGGAATTAATTCTTCACCAGAAGTCAAAAAGGATAACCCAGAAAAATTGGCATCCTGGTTGCACGGCAGTGACAGCACTGATAGTGAGAAACAAGCTTTTTGTAGCGAATGCTGGTGATTGCCGGGCAATTCTGAACCGTGCTGGTGAACCATTTCCTATGACCAGGGATCATGTTGCTAGTTGTCCAAAGGAAAGAGAACGGATTGTAAAGGAAGGAACTGAAGTCAAATGGCAAATAGATACATGGCGTGTTGGTGCAGCTGCTCTTCAGGTCACACGGTCCATTGGCGATGATGATCTTAAGCCAGCAGTCACAGCACAACCTGAGGTTATAGAAACCATTTTATCACCTGATGATGAGTTCCTGGTGATGGCAAGTGATGGATTGTGGGACGTGATGAGCAACGAGGATGTCCTGTCCATCATCAAGGACACAGTAAAAGAGCCTGGAATGTGCTCCAAGCGGCTGGCCACGGAGGCGGCAGCGCGTGGCAGCAAGGACAACATCACTGTCATCGTTGTGTTCCTTCGCCCCGTCTCCACTGCTGAGCGAATATACTAA
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| Protein seq | MFFDFFEPPNLADKIHVEEWNPSVQQVVTIATDLAKALQYLNILGIVHRDIKPANILIDKDFHPHLADFGLAMYQKDIKHVSVENWRSSGKPTGGFHKKNMVGTLIYMAPEILRKDIHTEKSDVYSFAISINELLTGVVPYTDLRAEAQAHTVLEMTYTEQQLTAAIVSQGLRPALALPESGAPPSLLSLIQRCWDSDPQQRPSFKDITEELKIIEKHIAVNSCSLASPANKSQNGNTEVHHYQEALSWLNQGELFAKGNKLDSTVDHWSDIFDQSSKYCPTLSWGSFATCGRRETMEDTHFMLPHMSEEKDLHAFGIFDGHRGSAAAEFSVRAVPGFLKQFNSNTSPTDALTEAFVRTDIAFREELILHQKSKRITQKNWHPGCTAVTALIVRNKLFVANAGDCRAILNRAGEPFPMTRDHVASCPKERERIVKEGTEVKWQIDTWRVGAAALQVTRSIGDDDLKPAVTAQPEVIETILSPDDEFLVMASDGLWDVMSNEDVLSIIKDTVKEPGMCSKRLATEAAARGSKDNITVIVVFLRPVSTAERIY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| RI | Chr01 | 20165396 | 20165870 | - | OsARC_01g0019920.01 | OsARC_01g0019920.01,OsARC_01g0019920.03,OsARC_01g0019920.02 | All |
| RI | Chr01 | 20160677 | 20161088 | - | OsARC_01g0019920.03 | OsARC_01g0019920.01,OsARC_01g0019920.03,OsARC_01g0019920.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.118356 | 0.411746 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0541900 | RBH | 2.567198 | 2.301345 | 3.290174 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g36080 | RBH | 1.546967 | 1.394534 | 0.806250 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0541900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0020600 | RBH | 0.063771 | 13.768987 | 2.047543 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0020210 | RBH | 0.364300 | 3.890111 | 1.428538 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0020540 | RBH | 1.223485 | 12.290860 | 6.430744 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0019820 | RBH | 3.128257 | 10.253798 | 10.781976 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0339700 | RBH | 4.858925 | 13.8209035 | 14.1448585 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0019740 | RBH | 0.179944 | 0.843737 | 0.878189 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0334000 | RBH | 8.3708435 | 15.247521 | 5.729498 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0019790 | RBH | 0.208668 | 0.455272 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0019680 | RBH | 0.555601 | 13.257106 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0019940 | RBH | 3.818468 | 17.444090 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0019830 | RBH | 0.811089 | 1.083459 | 1.328544 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0019730 | RBH | 0.492003 | 5.725755 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G021440 | RBH | 0.160147 | 1.536239 | 1.095552 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0021160 | RBH | 0.513506 | 16.618378 | 2.117749 |
