Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsARC_01g0010870 OGI:01027630 | 16/16 ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) Chr01:8719678-8722121
Gene Symbol -
DNA seq

ATGCCGAGTTCATCTGTATGTCCTCTCCCTATGGCTGCCAAGACCAACATCGAGTTGCAACACGATTTTGAAGAATGGTAAGTTAGTTGCGAATTTGTCATAGTTCTGTCTAATATTTCAGATTTTATATGCCTGTTACTATTGTGTTCGTGCGTTAAATGAATTTGAAAAGATATTTTTGCGATCTATGTTAAGGACCATGTTAAAGTTTTACAATTTTTTTTCATGAATGTTAGTATACGTGATATCGATTAAAATACAAATTTGTCATAGTTCTGTCTAATATTTCAGATTTTATATGCCTGTTACTATTGTGTTCGTGCGTTAAATGAATTTGAAAAGATATTTTTGCGATCTATGTTAAGGACCATGTTAAAATTTTACAATTTTTTTTCATGAATTTTAGTATACGTGATATCGATTAAAATGAGAATCAGATGACATTGGCTGTAGTAGCACTTTTTTTACATAAAACATAGCATGTGAGTTTTATTACTTAATCTGCATTACTAAAAAATGCCTATACCATATCCTGAGCTGGGATCTTTATCTAAAATTATTTTTAGTCCCTTGCTGTAAATCAATCTCTCCCCACAGTAAACAAAGACCAAGTACATCTCTCCCCAGTAAAAGAGAAAAACAGTCCCGTCACGGCATATCATCTTGATCTACTAGAACCGATCTGGTTTAACGCATGCGGATCCTAATGATGTTAAAGAGAAAATATATTTTGTAAGGAGATATTTATGGCAAGAAGATCAAGGGATCAGAAAATATCACCATGTACAATGGCCAATAGTGTGCTCTCCAAAAGAGCAAACAATGAACCATATTAATATTAATGTGTATGATTTTAAATATAAAAGATGAAGCACGAAATTTCTGTGCTAATTATACACTAAAAATGATATCAATACCTTGTTTTTGTGCTAATTATAAGTTTCAGTAGCTTGTTTTTAGGATATCAGTACCTTAGCTTGTTTTAGTTACAATTGCAGCAGTGGTGGATCCAACATAAACAATTTAGTTATGGTGAAACTATAATGTTCTTGCTTTCTATACAGGGGAGTGGAATCTCGTCCTCCTGGTGGGTTCGTTAATCTTATCAATGCCCCATCAAACCATATGCATCATGTCGCCGAAGGGAGTCCATCACAGCCTATCAATGTTGAGAATGGAGATATCTCTAGGACTAAGAAACGCTTATTATGGACGAACGATGAAGACTTGAGATTGGTAAGTGGCCTGTGTGAGTTATTTATTTGTCAATGTGATGTACATCACTCACATTACTAACACCAGTAAACATCTTTTTCCTAAAAATTGCAGATCAGCGCCTGGCTGAACAACTCAAATGATTCTATAGAATCAAATTTCAAGAAGAATGATAAATATTGGGGCGATGTTGCTGCAGCTTACAACAGCACTACCCCAAAAAGCCGGGTTAGGCAAGTTAAGCAAGTTAAGGATCGTTTTGGTAAAATTAAGAAGAAGGTTGGGAATTTTTGTTGCTCTTGGAAGGAGGCTAATTCATTATATGCTAGTGGGGAGTCTCATGATGATCTGATGGCTAAGGCAGTGAAAATGTATGAGAATGATTTCAAGGATGGTCCATTCTTGTTTATGCCAATTCACCCGTGGTGACTACAAAGTCCCAACAATTATCCTTGAAGCAGTTGCTTCACATGACCTTTGGATTTAGCATGCTTTCTTTGGTGTCGCTGGTTCTAACAACGACATCAACGTGCCGAATCAGTCCCCTCTATTCCTTGAACAAGTTAGAGGGGAGGCTCCTCGGGTTCATTTTTCTGTTAACGGGAATGAGTATAACAATGGGTATTACCTTGCTGATGGTATATACCCATATTGGGCTAGCTTCATAAAATCTATATCACTTCCACAAACAGAGAAGCATAAATTGTTTGCTAAACGTCAAGAAGGGGCAAGGAAAGATGTGGAGCGGGCTTTTGGAGTGTTGCAAGCCCGTTTCAACATTGTGCGCCGTCCAGCGAAGAAGTGGAAACGGAAGAGTGTTGGGAAAATCATGTTAGCTTGTGTGATTCTCCACAATATGATTGTTGAAGATGAGAGAGAGGATGCGATATGTGACATTGACCTCAATAGAATTCCTAGGACATCAATAGTCCTACCTCCTGAAGTAACTTCTGGTGATAATCCATGTTTTACTGATGTGCTACGTAGAAAATCTACTATTCGTGCTCGTTCTGTGCATACCCAACTGAAAACTGATTTAATTGAGCATATTTGGCATCAGTTTAGACATAGGCAACATGCATAAACATGGTAGGGTAATAAGCATGTGGTTTCTTTGCCTTTTATTTGCCGTGTGTAGATTATATCAATTAACCCTTGTGTCTAATTTATTTCAGGAACATGCTCTGCTCAGTATGTCCAAATCATGGTGCTGCACTTCTCAAAGGTAG

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CDS seq

ATGCCGAGTTCATCTGTATGTCCTCTCCCTATGGCTGCCAAGACCAACATCGAGTTGCAACACGATTTTGAAGAATGGGGAGTGGAATCTCGTCCTCCTGGTGGGTTCGTTAATCTTATCAATGCCCCATCAAACCATATGCATCATGTCGCCGAAGGGAGTCCATCACAGCCTATCAATGTTGAGAATGGAGATATCTCTAGGACTAAGAAACGCTTATTATGGACGAACGATGAAGACTTGAGATTGGAACATGCTCTGCTCAGTATGTCCAAATCATGGTGCTGCACTTCTCAAAGGTAG

Protein seq

MPSSSVCPLPMAAKTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPINVENGDISRTKKRLLWTNDEDLRLEHALLSMSKSWCCTSQR

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsARC_01g0010870 OsARC_01g0010870.01 Chr01 8719678 8722121 + NAM
CDS seq

ATGCCGAGTTCATCTGTATGTCCTCTCCCTATGGCTGCCAAGACCAACATCGAGTTGCAACACGATTTTGAAGAATGGGGAGTGGAATCTCGTCCTCCTGGTGGGTTCGTTAATCTTATCAATGCCCCATCAAACCATATGCATCATGTCGCCGAAGGGAGTCCATCACAGCCTATCAATGTTGAGAATGGAGATATCTCTAGGACTAAGAAACGCTTATTATGGACGAACGATGAAGACTTGAGATTGGAACATGCTCTGCTCAGTATGTCCAAATCATGGTGCTGCACTTCTCAAAGGTAG

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Protein seq

MPSSSVCPLPMAAKTNIELQHDFEEWGVESRPPGGFVNLINAPSNHMHHVAEGSPSQPINVENGDISRTKKRLLWTNDEDLRLEHALLSMSKSWCCTSQR

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0527900 SBH 0.0 0.0 1.001779
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g15700 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0373400 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0011370 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0011020 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0011360 RBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0010920 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0148000 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0010910 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0145800 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0010920 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0010950 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0010890 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0011040 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0010880 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G011030 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0010890 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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