Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os12g0587100 | OGI:12063410 | 5/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr12:24514584-24518724 | ||||||||
| Gene Symbol | HSA1B, hsa1(t), s(t), hst49 | ||||||||||
| DNA seq | TTACCAGATTTTCTTCCATACATTTTGCTGCATTGATGAGGAGGATCCAACATCTTCCATTGTAGGCTGTTTATCCTGCACAGTAGTTTGCTGTGTCGTGGGATATTCACCCACATCTAACACAAAAACTATTACACAGTTACAAAGAGTGCAACATCAAGATAAATGAGACAAGATGTAAATATTACCTGTTTTTATAGGATGGCACATAGTACAGCATGGAGTCTGACTTTGTGATAATCTATTAGTAGCAACAAATAAGGATTAGAATTAAAGTATTATGTAAAAGAAGCTCACAAAAAGTTCAGTATACTTACTCCTCTGTGATGTCCACCTTATTTAGAATAAAGCACCAGATAATTTCGGGAAGCAAATCACCCAGATAAGCAGGTGTCATCAATTCTATTGTATTATCTGGAAAATTTTCCTTCCAAGGTACCGATGTTTTGTCCTGAAAAGTACAAATAGCACTGTGATACCTATAATATGTTGAGAATGAACTGAAGGAGGTGAGTAGAGGGTGAGAGAGCAAGCAGAACAGAGGATTGATTTTTTTTTGAAGCTATATCTTTTATTCGAAGCATATGGCATATATTTATAGTAAACTAACAAGAAAAGAGCAACTAAACTACTACTGATACTTAGTGGATAAGCAAACAAAAGCAATAAGACAAGGATATGATTATATTAAGCATAATAAAAACAATTCACAATTAAATAAAACTGAAGCAAGTTAGATACTTACAAATCTGTGTTGAGGAGCATGTATAGGAGCATCACGGCTCAACCTAAATCCATTGAACGCCTTAAACTCGAAGTTCACTGAATTCTCAATGAAGTAAGGCTCTCCATCATCCTTTGCTTTTTTGATGATTTTATCAAAGACAGGAATTGTAGAAAGATTTGGCATTCGAGATGTATCCCATGTGATATGATTGATCTTATCTATCAAAGTGGCTCTTTGTTTTGGAGGTAGGCTATCAAATTTTTGCTTCAATCTCACTGTCAGCACCCCTCTCATGTATGAATCCATAAAGCATAGGTTCAATTCAATTATAACTTTCTGCAAATGTGGTACGCATGGTAGATCTATTTTCAATATAAACTTCATAAAATATTCAAAGTACGGTGGGTATTCTGAGACAAGATTTGTTCCAATTGTTCTGAAGAAATCCTTTAATGTCTTTGCCAGAAAAGATAAATTTTCTTGCAGAAAATGCGTTGTGAGGTTCCCTTTTGCTGGTGTGCTAACCTTGACATGACCATTGATAACCTTGAAATGAGAGAGTTCACATTTGGGCTCCCAGCAATGTCGCTCCTTGAATGCCTTTGTAAAACATAAGACCCATGTTCTCAAAAGAATACTGCTTCTGGGTGTCAACTCTGGGAAGAATCTTCCATCATACAAGGCGGTTTTTTTCACAAGACTATTCTTGTGCTTGTGTAAATATTCCTCCAGTGATGTACCAGCACCCCCCAGAATTCTACTGCGAACATTCACAGTACTGTCTTTCTGTACACCATATGATAGTAAGCTGCGGTTTAACCTGAGCCTCTTCCCTCTGTATACAAAATAGATATTTCTACTGCTGATTCCAGTTCTCTTTTGATATAACATCAGCATGTATTCAACGTCTTTCTTGACGTCGACCTGTAGTGACAAATTTGCACTACCATTGCCTATGAAAATCTGCACACCAAGTCCAGATTCAAGGGAAATAGTCTTTCTCGCAGGATCAGAACCAATCTTCTGAGGTTCAACTCGATCAGGTGTTCTTGCAGGTAGAGGCTCAACTACATCAAGCTTTCTTGTAGATACAGGCTCAATTGAAGTGTACAATTGGCTACCATTGTCAGTGGAAGCACTATCCTGCTGGCTCTCCGCATTGCTCTCGCTGCAAGTATCACCGTGCTGACTGTCTGTGTTACGAGGGGAGTCCTCGGTGATATTAGTGGTAAGTGGAGACATCGGGAACTGATGATCTGACACTGATTCTGGGAGCTCATCATGATCAAAGGAGAATGGTACTAGCAAGGGTACATACTTCGGTCGCGAGACCGGTGGAAGGAGGACCTTGTGTGTTGCAGGACCGCTTCCTACAGGGACTACACACATTCTGCAGATACCAGGAAGGGAGCGCATGAAATCACTGAGCTTAGGATAACCAAGTGTGCTATGATCAAGCTCCATTCTGCAAATTGCTCTGAAATCACCCTTCAGGGAGCTCAATGGGTACCTATCTCCAAGTCGTTCAGTAGCATCTGCAAGAAATCCTGGCAGCCACTTCCTGAATATAAAGAACCAAGATGGAAGACACTTCTCTGGCAAGGGCCTCCGCTTCCTAATGTAATGTTCCTCCTTTAGCTCACCACCCAACAGATGATGAGTTACCTTTGGAACCTCCTGGTTGTGGTGCCTGAATGAAGAAGTTTTCTGGATTTCTGAAGGCAAGGATCCTCTAGCAACAGCATCCTTTACCTCCACTCTCTTCCCAAGCATGTACACATGATGAGTTTCCTTTGCACTTATCACATCCTCTTCTCTTTTGAACTTTACAAAACCGAATCCTCTGGATTGCACCCGATCACCCATCCTTATCCCAATGACTACTGCTTCCTCCATAGGTCCAAATTCAGCAGTGAAGAACTCAGTGAGGTACTCTGCCAGGAAGAACAAAACAAGGCAAGTGTTAAAACTTCGAAACACATTAGTTCTAACTTTATTAAGTACAAGTAGTTCAGGATTCTGAAGTTTACCAGCGCCCACAGAAGGTGGGAGGCCCCCAACAAAAATTTTCCGAGTGTAGTCGTGCTTCAGCCAATGATTAGGCTAAAAGAAAATCTTATAAGAGGCAGACCATGTGAAGAAAAAGGGAATTGGTTAATATAGGCAGAGCATGTTTGTTTACCCGAGGCACAAACTTGGAACCTTGCTTGGGAGCACAATGGCTCTTACTCTTGCCCCCCCTGGGCAGAACCATTACTAGACCGGAAATCCCGATGGCTTGCTGATGTTTTAAGCCCAGTAAAGCTGCCACATTATCAAAATAAATATATTATTAGTTTGAAACATAGGGTGAGAAGCAATGCTTCTAGTATTCAAAAGAATGGAAGATCTGATATAAATCATGCACCATTCACCAGACAAACCTTTCATTTAAATCATTGCTGTCATAATCAACAAAATTGTCATCTAGAAATTCCTTGCTCATCACACTTTTTTCCGGATGTGAGCTACGGTTCCCTACAAACAGAATATATTTCCGTTGAAAAGGTATTTGCTGCGTATTGATCATTATGCAGTAAAACCAACAGGAAACCAATCTTCAAATCTTTTTCATTGAATCGAACACTGCTAATTGTATGCACTACTACAAACATTTTTGTGATTTCAGTTGATAAATATCTTTAAATGTCAGAAAATATCTTACATGGAGCCACATTTGCAGAGGTAAGAATGAAACGCATATCTTGGGACGTTGCCACATCTATTGGTCTTTGCTTTCTGTTCAATGTCAAAGGATCACAGGATGGTAAGTGCATCAAGCCATCAAACAGAAGCAATATTCTTCTTAAATCCAAATATTACCACCTTAGGTTCTGTACTTTGGTGCTAGCCCCAGAACGCAGGAGAAGCTTTACACAGTCCAAAGAACCATTCTTCACTGCTAAGAACAATGGGGTTTCTTTGGTCTTGGAAGGTGTATCAACGCAATCTTGAGCGTGAAGCAGAAGTGACTTACAGAGCAAACAAACATACTATCAATTAGTTATAAGCTCAAAAAATGCCATCGTGTGAGTAGAAGCAACAAAAGGCTACCTGAAGAGCTTTATAATTTCCCTTAGCTGCAGCACTGTGTACTGGTGTAAGACCAAGTTTGTTCCCCTGGAAAACTCTGGCACCATTCTTCAGCAGGAGCCACACAATCCTGCACAAATACATAAGACAACTAAGTAAAGAGAATGCAAAGAGCAGTAAGAACTAGTATGTTGTATTTTAAGTTTTTAACAGTTGATAGAACAAAATTCTGATAGCATACCTTGGCTCCTGTGTGCTTGAACTACCACTAAGGCACCAGTGAAGTGCTGTGTTTCCTTCAGGATCGGCTTCATTGACATCAACATCCCCCATCAGGAGCAT
More
|
||||||||||
| CDS seq | ATGCTCCTGATGGGGGATGTTGATGTCAATGAAGCCGATCCTGAAGGAAACACAGCACTTCACTGGTGCCTTAGTGGTAGTTCAAGCACACAGGAGCCAAGGATTGTGTGGCTCCTGCTGAAGAATGGTGCCAGAGTTTTCCAGGGGAACAAACTTGGTCTTACACCAGTACACAGTGCTGCAGCTAAGGGAAATTATAAAGCTCTTCAGTCACTTCTGCTTCACGCTCAAGATTGCGTTGATACACCTTCCAAGACCAAAGAAACCCCATTGTTCTTAGCAGTGAAGAATGGTTCTTTGGACTGTGTAAAGCTTCTCCTGCGTTCTGGGGCTAGCACCAAAGTACAGAACCTAAGAAAGCAAAGACCAATAGATGTGGCAACGTCCCAAGATATGCGTTTCATTCTTACCTCTGCAAATGTGGCTCCATCTTTACTGGGCTTAAAACATCAGCAAGCCATCGGGATTTCCGGTCTAGTAATGGTTCTGCCCAGGGGGGGCAAGAGTAAGAGCCATTGTGCTCCCAAGCAAGGTTCCAAGTTTGTGCCTCGGCCTAATCATTGGCTGAAGCACGACTACACTCGGAAAATTTTTGTTGGGGGCCTCCCACCTTCTGTGGGCGCTGAGTACCTCACTGAGTTCTTCACTGCTGAATTTGGACCTATGGAGGAAGCAGTAGTCATTGGGATAAGGATGGGTGATCGGGTGCAATCCAGAGGATTCGGTTTTGTAAAGTTCAAAAGAGAAGAGGATGTGATAAGTGCAAAGGAAACTCATCATGTGTACATGCTTGGGAAGAGAGTGGAGGTAAAGGATGCTGTTGCTAGAGGATCCTTGCCTTCAGAAATCCAGAAAACTTCTTCATTCAGGCACCACAACCAGGAGGTTCCAAAGGTAACTCATCATCTGTTGGGTGGTGAGCTAAAGGAGGAACATTACATTAGGAAGCGGAGGCCCTTGCCAGAGAAGTGTCTTCCATCTTGGTTCTTTATATTCAGGAAGTGGCTGCCAGGATTTCTTGCAGATGCTACTGAACGACTTGGAGATAGGTACCCATTGAGCTCCCTGAAGGGTGATTTCAGAGCAATTTGCAGAATGGAGCTTGATCATAGCACACTTGGTTATCCTAAGCTCAGTGATTTCATGCGCTCCCTTCCTGGTATCTGCAGAATGTGTGTAGTCCCTGTAGGAAGCGGTCCTGCAACACACAAGGTCCTCCTTCCACCGGTCTCGCGACCGAAGTATGTACCCTTGCTAGTACCATTCTCCTTTGATCATGATGAGCTCCCAGAATCAGTGTCAGATCATCAGTTCCCGATGTCTCCACTTACCACTAATATCACCGAGGACTCCCCTCGTAACACAGACAGTCAGCACGGTGATACTTGCAGCGAGAGCAATGCGGAGAGCCAGCAGGATAGTGCTTCCACTGACAATGGTAGCCAATTGTACACTTCAATTGAGCCTGTATCTACAAGAAAGCTTGATGTAGTTGAGCCTCTACCTGCAAGAACACCTGATCGAGTTGAACCTCAGAAGATTGGTTCTGATCCTGCGAGAAAGACTATTTCCCTTGAATCTGGACTTGGTGTGCAGATTTTCATAGGCAATGGTAGTGCAAATTTGTCACTACAGGTCGACGTCAAGAAAGACGTTGAATACATGCTGATGTTATATCAAAAGAGAACTGGAATCAGCAGTAGAAATATCTATTTTGTATACAGAGGGAAGAGGCTCAGGTTAAACCGCAGCTTACTATCATATGGTGTACAGAAAGACAGTACTGTGAATGTTCGCAGTAGAATTCTGGGGGGTGCTGGTACATCACTGGAGGAATATTTACACAAGCACAAGAATAGTCTTGTGAAAAAAACCGCCTTGTATGATGGAAGATTCTTCCCAGAGTTGACACCCAGAAGCAGTATTCTTTTGAGAACATGGGTCTTATGTTTTACAAAGGCATTCAAGGAGCGACATTGCTGGGAGCCCAAATGTGAACTCTCTCATTTCAAGGTTATCAATGGTCATGTCAAGGTTAGCACACCAGCAAAAGGGAACCTCACAACGCATTTTCTGCAAGAAAATTTATCTTTTCTGGCAAAGACATTAAAGGATTTCTTCAGAACAATTGGAACAAATCTTGTCTCAGAATACCCACCGTACTTTGAATATTTTATGAAGTTTATATTGAAAATAGATCTACCATGCGTACCACATTTGCAGAAAGTTATAATTGAATTGAACCTATGCTTTATGGATTCATACATGAGAGGGGTGCTGACAGTGAGATTGAAGCAAAAATTTGATAGCCTACCTCCAAAACAAAGAGCCACTTTGATAGATAAGATCAATCATATCACATGGGATACATCTCGAATGCCAAATCTTTCTACAATTCCTGTCTTTGATAAAATCATCAAAAAAGCAAAGGATGATGGAGAGCCTTACTTCATTGAGAATTCAGTGAACTTCGAGTTTAAGGCGTTCAATGGATTTAGGTTGAGCCGTGATGCTCCTATACATGCTCCTCAACACAGATTTGACAAAACATCGGTACCTTGGAAGGAAAATTTTCCAGATAATACAATAGAATTGATGACACCTGCTTATCTGGGTGATTTGCTTCCCGAAATTATCTGGTGCTTTATTCTAAATAAGGTGGACATCACAGAGGAATTATCACAAAGTCAGACTCCATGCTGTACTATGTGCCATCCTATAAAAACAGATGTGGGTGAATATCCCACGACACAGCAAACTACTGTGCAGGATAAACAGCCTACAATGGAAGATGTTGGATCCTCCTCATCAATGCAGCAAAATGTATGGAAGAAAATCTGGTAA
More
|
||||||||||
| Protein seq | MLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWLLLKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCVKLLLRSGASTKVQNLRKQRPIDVATSQDMRFILTSANVAPSLLGLKHQQAIGISGLVMVLPRGGKSKSHCAPKQGSKFVPRPNHWLKHDYTRKIFVGGLPPSVGAEYLTEFFTAEFGPMEEAVVIGIRMGDRVQSRGFGFVKFKREEDVISAKETHHVYMLGKRVEVKDAVARGSLPSEIQKTSSFRHHNQEVPKVTHHLLGGELKEEHYIRKRRPLPEKCLPSWFFIFRKWLPGFLADATERLGDRYPLSSLKGDFRAICRMELDHSTLGYPKLSDFMRSLPGICRMCVVPVGSGPATHKVLLPPVSRPKYVPLLVPFSFDHDELPESVSDHQFPMSPLTTNITEDSPRNTDSQHGDTCSESNAESQQDSASTDNGSQLYTSIEPVSTRKLDVVEPLPARTPDRVEPQKIGSDPARKTISLESGLGVQIFIGNGSANLSLQVDVKKDVEYMLMLYQKRTGISSRNIYFVYRGKRLRLNRSLLSYGVQKDSTVNVRSRILGGAGTSLEEYLHKHKNSLVKKTALYDGRFFPELTPRSSILLRTWVLCFTKAFKERHCWEPKCELSHFKVINGHVKVSTPAKGNLTTHFLQENLSFLAKTLKDFFRTIGTNLVSEYPPYFEYFMKFILKIDLPCVPHLQKVIIELNLCFMDSYMRGVLTVRLKQKFDSLPPKQRATLIDKINHITWDTSRMPNLSTIPVFDKIIKKAKDDGEPYFIENSVNFEFKAFNGFRLSRDAPIHAPQHRFDKTSVPWKENFPDNTIELMTPAYLGDLLPEIIWCFILNKVDITEELSQSQTPCCTMCHPIKTDVGEYPTTQQTTVQDKQPTMEDVGSSSSMQQNVWKKIW |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os12g0587100 | Os12t0587100-00 | Chr12 | 24514584 | 24518724 | - | irgsp1_rep | ||
| CDS seq | ATGCTCCTGATGGGGGATGTTGATGTCAATGAAGCCGATCCTGAAGGAAACACAGCACTTCACTGGTGCCTTAGTGGTAGTTCAAGCACACAGGAGCCAAGGATTGTGTGGCTCCTGCTGAAGAATGGTGCCAGAGTTTTCCAGGGGAACAAACTTGGTCTTACACCAGTACACAGTGCTGCAGCTAAGGGAAATTATAAAGCTCTTCAGTCACTTCTGCTTCACGCTCAAGATTGCGTTGATACACCTTCCAAGACCAAAGAAACCCCATTGTTCTTAGCAGTGAAGAATGGTTCTTTGGACTGTGTAAAGCTTCTCCTGCGTTCTGGGGCTAGCACCAAAGTACAGAACCTAAGAAAGCAAAGACCAATAGATGTGGCAACGTCCCAAGATATGCGTTTCATTCTTACCTCTGCAAATGTGGCTCCATCTTTACTGGGCTTAAAACATCAGCAAGCCATCGGGATTTCCGGTCTAGTAATGGTTCTGCCCAGGGGGGGCAAGAGTAAGAGCCATTGTGCTCCCAAGCAAGGTTCCAAGTTTGTGCCTCGGCCTAATCATTGGCTGAAGCACGACTACACTCGGAAAATTTTTGTTGGGGGCCTCCCACCTTCTGTGGGCGCTGAGTACCTCACTGAGTTCTTCACTGCTGAATTTGGACCTATGGAGGAAGCAGTAGTCATTGGGATAAGGATGGGTGATCGGGTGCAATCCAGAGGATTCGGTTTTGTAAAGTTCAAAAGAGAAGAGGATGTGATAAGTGCAAAGGAAACTCATCATGTGTACATGCTTGGGAAGAGAGTGGAGGTAAAGGATGCTGTTGCTAGAGGATCCTTGCCTTCAGAAATCCAGAAAACTTCTTCATTCAGGCACCACAACCAGGAGGTTCCAAAGGTAACTCATCATCTGTTGGGTGGTGAGCTAAAGGAGGAACATTACATTAGGAAGCGGAGGCCCTTGCCAGAGAAGTGTCTTCCATCTTGGTTCTTTATATTCAGGAAGTGGCTGCCAGGATTTCTTGCAGATGCTACTGAACGACTTGGAGATAGGTACCCATTGAGCTCCCTGAAGGGTGATTTCAGAGCAATTTGCAGAATGGAGCTTGATCATAGCACACTTGGTTATCCTAAGCTCAGTGATTTCATGCGCTCCCTTCCTGGTATCTGCAGAATGTGTGTAGTCCCTGTAGGAAGCGGTCCTGCAACACACAAGGTCCTCCTTCCACCGGTCTCGCGACCGAAGTATGTACCCTTGCTAGTACCATTCTCCTTTGATCATGATGAGCTCCCAGAATCAGTGTCAGATCATCAGTTCCCGATGTCTCCACTTACCACTAATATCACCGAGGACTCCCCTCGTAACACAGACAGTCAGCACGGTGATACTTGCAGCGAGAGCAATGCGGAGAGCCAGCAGGATAGTGCTTCCACTGACAATGGTAGCCAATTGTACACTTCAATTGAGCCTGTATCTACAAGAAAGCTTGATGTAGTTGAGCCTCTACCTGCAAGAACACCTGATCGAGTTGAACCTCAGAAGATTGGTTCTGATCCTGCGAGAAAGACTATTTCCCTTGAATCTGGACTTGGTGTGCAGATTTTCATAGGCAATGGTAGTGCAAATTTGTCACTACAGGTCGACGTCAAGAAAGACGTTGAATACATGCTGATGTTATATCAAAAGAGAACTGGAATCAGCAGTAGAAATATCTATTTTGTATACAGAGGGAAGAGGCTCAGGTTAAACCGCAGCTTACTATCATATGGTGTACAGAAAGACAGTACTGTGAATGTTCGCAGTAGAATTCTGGGGGGTGCTGGTACATCACTGGAGGAATATTTACACAAGCACAAGAATAGTCTTGTGAAAAAAACCGCCTTGTATGATGGAAGATTCTTCCCAGAGTTGACACCCAGAAGCAGTATTCTTTTGAGAACATGGGTCTTATGTTTTACAAAGGCATTCAAGGAGCGACATTGCTGGGAGCCCAAATGTGAACTCTCTCATTTCAAGGTTATCAATGGTCATGTCAAGGTTAGCACACCAGCAAAAGGGAACCTCACAACGCATTTTCTGCAAGAAAATTTATCTTTTCTGGCAAAGACATTAAAGGATTTCTTCAGAACAATTGGAACAAATCTTGTCTCAGAATACCCACCGTACTTTGAATATTTTATGAAGTTTATATTGAAAATAGATCTACCATGCGTACCACATTTGCAGAAAGTTATAATTGAATTGAACCTATGCTTTATGGATTCATACATGAGAGGGGTGCTGACAGTGAGATTGAAGCAAAAATTTGATAGCCTACCTCCAAAACAAAGAGCCACTTTGATAGATAAGATCAATCATATCACATGGGATACATCTCGAATGCCAAATCTTTCTACAATTCCTGTCTTTGATAAAATCATCAAAAAAGCAAAGGATGATGGAGAGCCTTACTTCATTGAGAATTCAGTGAACTTCGAGTTTAAGGCGTTCAATGGATTTAGGTTGAGCCGTGATGCTCCTATACATGCTCCTCAACACAGATTTGACAAAACATCGGTACCTTGGAAGGAAAATTTTCCAGATAATACAATAGAATTGATGACACCTGCTTATCTGGGTGATTTGCTTCCCGAAATTATCTGGTGCTTTATTCTAAATAAGGTGGACATCACAGAGGAATTATCACAAAGTCAGACTCCATGCTGTACTATGTGCCATCCTATAAAAACAGATGTGGGTGAATATCCCACGACACAGCAAACTACTGTGCAGGATAAACAGCCTACAATGGAAGATGTTGGATCCTCCTCATCAATGCAGCAAAATGTATGGAAGAAAATCTGGTAA
More
|
|||||||
| Protein seq | MLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWLLLKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCVKLLLRSGASTKVQNLRKQRPIDVATSQDMRFILTSANVAPSLLGLKHQQAIGISGLVMVLPRGGKSKSHCAPKQGSKFVPRPNHWLKHDYTRKIFVGGLPPSVGAEYLTEFFTAEFGPMEEAVVIGIRMGDRVQSRGFGFVKFKREEDVISAKETHHVYMLGKRVEVKDAVARGSLPSEIQKTSSFRHHNQEVPKVTHHLLGGELKEEHYIRKRRPLPEKCLPSWFFIFRKWLPGFLADATERLGDRYPLSSLKGDFRAICRMELDHSTLGYPKLSDFMRSLPGICRMCVVPVGSGPATHKVLLPPVSRPKYVPLLVPFSFDHDELPESVSDHQFPMSPLTTNITEDSPRNTDSQHGDTCSESNAESQQDSASTDNGSQLYTSIEPVSTRKLDVVEPLPARTPDRVEPQKIGSDPARKTISLESGLGVQIFIGNGSANLSLQVDVKKDVEYMLMLYQKRTGISSRNIYFVYRGKRLRLNRSLLSYGVQKDSTVNVRSRILGGAGTSLEEYLHKHKNSLVKKTALYDGRFFPELTPRSSILLRTWVLCFTKAFKERHCWEPKCELSHFKVINGHVKVSTPAKGNLTTHFLQENLSFLAKTLKDFFRTIGTNLVSEYPPYFEYFMKFILKIDLPCVPHLQKVIIELNLCFMDSYMRGVLTVRLKQKFDSLPPKQRATLIDKINHITWDTSRMPNLSTIPVFDKIIKKAKDDGEPYFIENSVNFEFKAFNGFRLSRDAPIHAPQHRFDKTSVPWKENFPDNTIELMTPAYLGDLLPEIIWCFILNKVDITEELSQSQTPCCTMCHPIKTDVGEYPTTQQTTVQDKQPTMEDVGSSSSMQQNVWKKIW
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0587100 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g39700 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0018980 | RBH | 0.0 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0019090 | RBH | 0.0 | 0.0 | 0.083870 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0019440 | RBH | 0.0 | 0.0 | 0.261079 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0018760 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0018530 | SBH | 0.0 | 0.000000 | 2.174117 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0313900 | SBH | 0.0208435 | 0.0541415 | 2.4739075 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0018400 | SBH | 0.0 | 0.000000 | 0.084646 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0344900 | SBH | 0.049338 | 0.0102395 | 8.156766 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0018640 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0018870 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0018790 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0018820 | SBH | 0.0 | 0.0 | 0.195806 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0019000 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G018660 | SBH | 0.0 | 0.215306 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0018360 | SBH | 0.0 | 0.0 | 0.190007 |
