Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os12g0486600 OGI:12049320 | 16/16 Nipponbare | IRGSP 1.0 | RAP-db Chr12:18098260-18101695
Gene Symbol CDPK27, OsCDPK27, OsCPK27
DNA seq

GGACACGGGCACAAAAACGTCCCACGCAACCAATCAACCAATTTCCCGCGCGCTGTCACGCTCACACAGTTGAGCTCCCGCGCCGAGTCCCGCCACCCAACCGCGGCCCTCCCGCTGTTTCCCGCCAAATTTGGCACGCCGCCGCTGTTGCCTCTCCCTCTCCGTTTCTCTTCCATTTCCTCTCCATTTTTAGCTTCCCCCGATCGTCTCGTCTCCACCCATCCTTCCTCCCCCGCCGCGCCTTCGCCACCACCGCACATCATCGCTCGCTTCCCGGCGGAACGCGCCCCGTTCCGCCGCCGCCGCCGCAGGAGAAGACGACTACGACGACGACGAGCGGTGTTGTGTGAAGAGAAGGTGATCCTGACCGCCGCCGTACGCCGCCATTGCCGCCGGGGCCGCGGCACCGCCCCTGATGGGCAACGTCTGCATCGGCCCGCGCCGCAACTTCGCCAAGAACGGCCTCCTCGGCATCCTGCGGCCGCGCCACGCCGCGCCGTCCTCCCCGTCGCAGCCCACCACCACCTCCCGCTCCATCCCCGTCGTGCTCCCCTCCGCCCCCTCCTCCAAGCCGCCGCCGCCCACCCAGACCGCCCCGCCCGTACCCGTCGTCATCTCCGAGCCGCCGCCACCGCAGCCGCAGCCCGAACCGCAGCCCGCGGCGCCGTCGCAGCCGCCGCCACCGCAGGAGCAGCCCTCGCCGCCACCGCCCGCGTCGTCGAACACCACCCAGCAGCCTCCGCCGCCGCAGCAGCGGCAGCAGTCGCGCGCCAAGAAGCCGGCGCACATCAAGCGCATCTCCAGCGCCGGCCTGCAGGTGGAGTCGGTGCTCCGGCGAAAGACGGAGAATCTCAAGGACAAATACAGCCTGGGGCGCAAACTCGGTCAGGGCCAGTTCGGGACGACGTACCTGTGCGTCGACAAGGCGAACGGCGGCGAGTACGCGTGCAAGTCGATCGCCAAGCGGAAGCTACTCACCGACGAGGACGTGGAGGACGTCCGCCGCGAGATCCAGATCATGCACCACCTCGCCGGCCACCCCAACATCATCTCCATCCGCGGCGCCTACGAGGACGCCGTGGCGGTGCACGTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTGTTCGACCGGATCGTGCGCAAGGGGCACTACACGGAGCGGCAGGCGGCCGGGCTCGCCCGCGTCATCGTCGCCGTCGTCGAGTCGTGCCACTCGCTCGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTGTTCGTCGGCAACGAGGAGGACGCGCCGCTCAAGACCATCGACTTCGGCCTCTCCATGTTTTTCCGCCCAGGTAAACAAACAACCGGTCACGCACCATGGTCGTCGCCGCCATTGTCGCCGTCGTGAGGAGCTCGATCGATCTGCGTGGCTTTGCACTGCAGGCGAGGTGTTCACCGACGTGGTGGGGAGCCCGTACTACGTGGCGCCGGAGGTGCTGAAGAAGAGCTACGGGCAGGAGGCCGACGTGTGGAGCGCCGGCGTCATCATCTACATCCTCCTCTGCGGCGTGCCGCCGTTCTGGGCAGGTAGGTAGGCGACGCCGCCATTGACGAACAAATTTCGACCTCGAATGCTGAACAAATTTCTCGCCGCCGCCGGCGACATCGCCGTCGTCGTCTTCGCAGAGACGGAGCAGGGGATATTCGAGCAGGTGCTGCACGGGACGCTGGACTTCGAGTCGGACCCATGGCCGAACGTGTCGGATGGCGCCAAGGACCTCCTCCGCAAGGTGCTCGTCCGGGACCCCAAGAAGCGGCTCACCGCGCACGAAGTCCTATGTGAGCTCACCACTCTCTTGGCAATCCGCCATGGCTGCTTCCTGCAACACTGACACTGCTGTTCTTTTCTCGCAGGCCATCCATGGCTGCAGATGAGCGGGTCGGCGCCGGACAAGCCGCTGGACTCGGCGGTGCTGTCGCGGCTGAGGCAGTTCTCGGCCATGAACAAGCTCAAGAAGATGGCATTGAGAGTGAGCACCTGTCTTGCATTGTGGAAATTGAGATTTGTTCATGGTGATGGTGTGTGACATTGATTGGGCGATCGATTGCGCAGGTGATCGCGGAGAACTTGTCGGAGGAGGAGATCGCCGGGTTGAAGGAGATGTTCAAGATGATGGACACGGACAACAGCGGGCAGATCAACTACGAGGAGCTCAAGGCCGGGTTGGAGAGAGTGGGTGCCAACATGAAGGAGTCTGAAATTTATCAGCTCATGCAGGCTGTAAGTTTGTGCTCTAAACCCCTCTGCTAATCATATTCACTTGGAGATCTTGGTTGGTAAAGATGTTTTCTAAAACTATTATTTGCAAATTACTCCCTCCGTTTTTAAATATTTGACGTTGTTAACTTTTTTAAATATGTTTGATCGTTTGTCTTATTTGAAAACTTTAAGTAATTATTAATTTTTTTTCTATCATTTGATTCATTGTTAAATATATTTTTATGTATACATATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACGGTCAAACATGTGCTAAAAAGTCAACGGTGTAAAATATTTAGAAACGGAGGGAGTAGTAATTAGTTACATTTAACTTCTAGATTGGAATGGCACAGAAGTTACATTTTAGACTCTAGTTCTTCAGATCTTCTTATTATTTTTCAGATCTTCAGATATAATGTGACATGAAGGAAGCACACTGACTTGATTGTTTTCTGTTGATAGTCAAAGGAGTTGCATAGAACATTGTCCCAGTCCATGTAGCTCGGCATAACAACGATTAAGAACAAGGGAAATCGAATTCTTTAACCAAATAGTTTAGTCACATGTTCTTTTGTTCTTCTTTGCCTGTTTACTTATTGACAAAGTGTTAACTGGTAAAGACTGAACTGAATTCATCAATGTGCAACTAATTGTGGCAAGTGCATAACAAAACGTTTATCATGTTCTTTATGTAGGCTGATATCGACAATAGTGGCACCATAGATTATGGAGAATTCATAGCTGCCACTCTACACCTCAACAAAGTTGAAAGGGAAGATCATCTATATGCCGCCTTCCAATACTTCGACAAAGATGGCAGTGGATACATCACATCTGATGAGCTCCAGCAAGCCTGCGATGAGTTTGGTATCGAGGATGTTCGACTCGAAGACATGATAGGCGAAGTAGATCAGGACAATGTAAGATCATCCAAGAACCAATCCTACAATTTTGCGCTGCTATTAGGGTTGGCAACTCTAACCATGAAAGATTATCTTCCATCAGTAAATCTGATGTGTTTTGTGCTATTCTTTTTCCTGCAGGATGGGCGTATAGATTACAACGAGTTTGTCGCGATGATGCAGAAAACAACAACAGGGTTCGGGAAGAAAGGCGGTCATAATTTTAGCGGTTTTAGGGATGCCTTGAAGTCACATAGCTGA

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CDS seq

GGACACGGGCACAAAAACGTCCCACGCAACCAATCAACCAATTTCCCGCGCGCTGTCACGCTCACACAGTTGAGCTCCCGCGCCGAGTCCCGCCACCCAACCGCGGCCCTCCCGCTGTTTCCCGCCAAATTTGGCACGCCGCCGCTGTTGCCTCTCCCTCTCCGTTTCTCTTCCATTTCCTCTCCATTTTTAGCTTCCCCCGATCGTCTCGTCTCCACCCATCCTTCCTCCCCCGCCGCGCCTTCGCCACCACCGCACATCATCGCTCGCTTCCCGGCGGAACGCGCCCCGTTCCGCCGCCGCCGCCGCAGGAGAAGACGACTACGACGACGACGAGCGGTGTTGTGTGAAGAGAAGGTGATCCTGACCGCCGCCGTACGCCGCCATTGCCGCCGGGGCCGCGGCACCGCCCCTGATGGGCAACGTCTGCATCGGCCCGCGCCGCAACTTCGCCAAGAACGGCCTCCTCGGCATCCTGCGGCCGCGCCACGCCGCGCCGTCCTCCCCGTCGCAGCCCACCACCACCTCCCGCTCCATCCCCGTCGTGCTCCCCTCCGCCCCCTCCTCCAAGCCGCCGCCGCCCACCCAGACCGCCCCGCCCGTACCCGTCGTCATCTCCGAGCCGCCGCCACCGCAGCCGCAGCCCGAACCGCAGCCCGCGGCGCCGTCGCAGCCGCCGCCACCGCAGGAGCAGCCCTCGCCGCCACCGCCCGCGTCGTCGAACACCACCCAGCAGCCTCCGCCGCCGCAGCAGCGGCAGCATCGGTGCTCCGGCGAAAGACGGAGAATCTCAAGGACAAATACAGCCTGGGGCGCAAACTCGGTCAGGGCCAGTTCGGGACGACGTACCTGTGCGTCGACAAGGCGAACGGCGGCGAGTACGCGTGCAAGTCGATCGCCAAGCGGAAGCTACTCACCGACGAGGACGTGGAGGACGTCCGCCGCGAGATCCAGATCATGCACCACCTCGCCGGCCACCCCAACATCATCTCCATCCGCGGCGCCTACGAGGACGCCGTGGCGGTGCACGTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTGTTCGACCGGATCGTGCGCAAGGGGCACTACACGGAGCGGCAGGCGGCCGGGCTCGCCCGCGTCATCGTCGCCGTCGTCGAGTCGTGCCACTCGCTCGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTGTTCGTCGGCAACGAGGAGGACGCGCCGCTCAAGACCATCGACTTCGGCCTCTCCATGTTTTTCCGCCCAGGCGAGGTGTTCACCGACGTGGTGGGGAGCCCGTACTACGTGGCGCCGGAGGTGCTGAAGAAGAGCTACGGGCAGGAGGCCGACGTGTGGAGCGCCGGCGTCATCATCTACATCCTCCTCTGCGGCGTGCCGCCGTTCTGGGCAGAGACGGAGCAGGGGATATTCGAGCAGGTGCTGCACGGGACGCTGGACTTCGAGTCGGACCCATGGCCGAACGTGTCGGATGGCGCCAAGGACCTCCTCCGCAAGGTGCTCGTCCGGGACCCCAAGAAGCGGCTCACCGCGCACGAAGTCCTATGCCATCCATGGCTGCAGATGAGCGGGTCGGCGCCGGACAAGCCGCTGGACTCGGCGGTGCTGTCGCGGCTGAGGCAGTTCTCGGCCATGAACAAGCTCAAGAAGATGGCATTGAGAGTGATCGCGGAGAACTTGTCGGAGGAGGAGATCGCCGGGTTGAAGGAGATGTTCAAGATGATGGACACGGACAACAGCGGGCAGATCAACTACGAGGAGCTCAAGGCCGGGTTGGAGAGAGTGGGTGCCAACATGAAGGAGTCTGAAATTTATCAGCTCATGCAGGCTGCTGATATCGACAATAGTGGCACCATAGATTATGGAGAATTCATAGCTGCCACTCTACACCTCAACAAAGTTGAAAGGGAAGATCATCTATATGCCGCCTTCCAATACTTCGACAAAGATGGCAGTGGATACATCACATCTGATGAGCTCCAGCAAGCCTGCGATGAGTTTGGTATCGAGGATGTTCGACTCGAAGACATGATAGGCGAAGTAGATCAGGACAATGTAAGATCATCCAAGAACCAATCCTACAATTTTGCGCTGCTATTAGGGTTGGCAACTCTAACCATGAAAGATTATCTTCCATCAGTAAATCTGATGTGTTTTGTGCTATTCTTTTTCCTGCAGGATGGGCGTATAGATTACAACGAGTTTGTCGCGATGATGCAGAAAACAACAACAGGGTTCGGGAAGAAAGGCGGTCATAATTTTAGCGGTTTTAGGGATGCCTTGAAGTCACATAGCTGA

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Protein seq

GHGHKNVPRNQSTNFPRAVTLTQLSSRAESRHPTAALPLFPAKFGTPPLLPLPLRFSSISSPFLASPDRLVSTHPSSPAAPSPPPHIIARFPAERAPFRRRRRRRRRLRRRRAVLCEEKVILTAAVRRHCRRGRGTAPDGQRLHRPAPQLRQERPPRHPAAAPRRAVLPVAAHHHLPLHPRRAPLRPLLQAAAAHPDRPARTRRHLRAAATAAAARTAARGAVAAAATAGAALAATARVVEHHPAASAAAAAAASVLRRKTENLKDKYSLGRKLGQGQFGTTYLCVDKANGGEYACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNIISIRGAYEDAVAVHVVMELCAGGELFDRIVRKGHYTERQAAGLARVIVAVVESCHSLGVMHRDLKPENFLFVGNEEDAPLKTIDFGLSMFFRPGEVFTDVVGSPYYVAPEVLKKSYGQEADVWSAGVIIYILLCGVPPFWAETEQGIFEQVLHGTLDFESDPWPNVSDGAKDLLRKVLVRDPKKRLTAHEVLCHPWLQMSGSAPDKPLDSAVLSRLRQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMMDTDNSGQINYEELKAGLERVGANMKESEIYQLMQAADIDNSGTIDYGEFIAATLHLNKVEREDHLYAAFQYFDKDGSGYITSDELQQACDEFGIEDVRLEDMIGEVDQDNVRSSKNQSYNFALLLGLATLTMKDYLPSVNLMCFVLFFFLQDGRIDYNEFVAMMQKTTTGFGKKGGHNFSGFRDALKSHS

Function Calcium-dependent protein kinase 27 [UniProtKB/Swiss-Prot:Q2QQR2]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os12g0486600 Os12t0486600-00 Chr12 18098260 18101695 + irgsp1_rep
CDS seq

GGACACGGGCACAAAAACGTCCCACGCAACCAATCAACCAATTTCCCGCGCGCTGTCACGCTCACACAGTTGAGCTCCCGCGCCGAGTCCCGCCACCCAACCGCGGCCCTCCCGCTGTTTCCCGCCAAATTTGGCACGCCGCCGCTGTTGCCTCTCCCTCTCCGTTTCTCTTCCATTTCCTCTCCATTTTTAGCTTCCCCCGATCGTCTCGTCTCCACCCATCCTTCCTCCCCCGCCGCGCCTTCGCCACCACCGCACATCATCGCTCGCTTCCCGGCGGAACGCGCCCCGTTCCGCCGCCGCCGCCGCAGGAGAAGACGACTACGACGACGACGAGCGGTGTTGTGTGAAGAGAAGGTGATCCTGACCGCCGCCGTACGCCGCCATTGCCGCCGGGGCCGCGGCACCGCCCCTGATGGGCAACGTCTGCATCGGCCCGCGCCGCAACTTCGCCAAGAACGGCCTCCTCGGCATCCTGCGGCCGCGCCACGCCGCGCCGTCCTCCCCGTCGCAGCCCACCACCACCTCCCGCTCCATCCCCGTCGTGCTCCCCTCCGCCCCCTCCTCCAAGCCGCCGCCGCCCACCCAGACCGCCCCGCCCGTACCCGTCGTCATCTCCGAGCCGCCGCCACCGCAGCCGCAGCCCGAACCGCAGCCCGCGGCGCCGTCGCAGCCGCCGCCACCGCAGGAGCAGCCCTCGCCGCCACCGCCCGCGTCGTCGAACACCACCCAGCAGCCTCCGCCGCCGCAGCAGCGGCAGCATCGGTGCTCCGGCGAAAGACGGAGAATCTCAAGGACAAATACAGCCTGGGGCGCAAACTCGGTCAGGGCCAGTTCGGGACGACGTACCTGTGCGTCGACAAGGCGAACGGCGGCGAGTACGCGTGCAAGTCGATCGCCAAGCGGAAGCTACTCACCGACGAGGACGTGGAGGACGTCCGCCGCGAGATCCAGATCATGCACCACCTCGCCGGCCACCCCAACATCATCTCCATCCGCGGCGCCTACGAGGACGCCGTGGCGGTGCACGTCGTCATGGAGCTCTGCGCCGGCGGCGAGCTGTTCGACCGGATCGTGCGCAAGGGGCACTACACGGAGCGGCAGGCGGCCGGGCTCGCCCGCGTCATCGTCGCCGTCGTCGAGTCGTGCCACTCGCTCGGCGTCATGCACCGCGACCTCAAGCCCGAGAACTTCCTGTTCGTCGGCAACGAGGAGGACGCGCCGCTCAAGACCATCGACTTCGGCCTCTCCATGTTTTTCCGCCCAGGCGAGGTGTTCACCGACGTGGTGGGGAGCCCGTACTACGTGGCGCCGGAGGTGCTGAAGAAGAGCTACGGGCAGGAGGCCGACGTGTGGAGCGCCGGCGTCATCATCTACATCCTCCTCTGCGGCGTGCCGCCGTTCTGGGCAGAGACGGAGCAGGGGATATTCGAGCAGGTGCTGCACGGGACGCTGGACTTCGAGTCGGACCCATGGCCGAACGTGTCGGATGGCGCCAAGGACCTCCTCCGCAAGGTGCTCGTCCGGGACCCCAAGAAGCGGCTCACCGCGCACGAAGTCCTATGCCATCCATGGCTGCAGATGAGCGGGTCGGCGCCGGACAAGCCGCTGGACTCGGCGGTGCTGTCGCGGCTGAGGCAGTTCTCGGCCATGAACAAGCTCAAGAAGATGGCATTGAGAGTGATCGCGGAGAACTTGTCGGAGGAGGAGATCGCCGGGTTGAAGGAGATGTTCAAGATGATGGACACGGACAACAGCGGGCAGATCAACTACGAGGAGCTCAAGGCCGGGTTGGAGAGAGTGGGTGCCAACATGAAGGAGTCTGAAATTTATCAGCTCATGCAGGCTGCTGATATCGACAATAGTGGCACCATAGATTATGGAGAATTCATAGCTGCCACTCTACACCTCAACAAAGTTGAAAGGGAAGATCATCTATATGCCGCCTTCCAATACTTCGACAAAGATGGCAGTGGATACATCACATCTGATGAGCTCCAGCAAGCCTGCGATGAGTTTGGTATCGAGGATGTTCGACTCGAAGACATGATAGGCGAAGTAGATCAGGACAATGTAAGATCATCCAAGAACCAATCCTACAATTTTGCGCTGCTATTAGGGTTGGCAACTCTAACCATGAAAGATTATCTTCCATCAGTAAATCTGATGTGTTTTGTGCTATTCTTTTTCCTGCAGGATGGGCGTATAGATTACAACGAGTTTGTCGCGATGATGCAGAAAACAACAACAGGGTTCGGGAAGAAAGGCGGTCATAATTTTAGCGGTTTTAGGGATGCCTTGAAGTCACATAGCTGA

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Protein seq

GHGHKNVPRNQSTNFPRAVTLTQLSSRAESRHPTAALPLFPAKFGTPPLLPLPLRFSSISSPFLASPDRLVSTHPSSPAAPSPPPHIIARFPAERAPFRRRRRRRRRLRRRRAVLCEEKVILTAAVRRHCRRGRGTAPDGQRLHRPAPQLRQERPPRHPAAAPRRAVLPVAAHHHLPLHPRRAPLRPLLQAAAAHPDRPARTRRHLRAAATAAAARTAARGAVAAAATAGAALAATARVVEHHPAASAAAAAAASVLRRKTENLKDKYSLGRKLGQGQFGTTYLCVDKANGGEYACKSIAKRKLLTDEDVEDVRREIQIMHHLAGHPNIISIRGAYEDAVAVHVVMELCAGGELFDRIVRKGHYTERQAAGLARVIVAVVESCHSLGVMHRDLKPENFLFVGNEEDAPLKTIDFGLSMFFRPGEVFTDVVGSPYYVAPEVLKKSYGQEADVWSAGVIIYILLCGVPPFWAETEQGIFEQVLHGTLDFESDPWPNVSDGAKDLLRKVLVRDPKKRLTAHEVLCHPWLQMSGSAPDKPLDSAVLSRLRQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMMDTDNSGQINYEELKAGLERVGANMKESEIYQLMQAADIDNSGTIDYGEFIAATLHLNKVEREDHLYAAFQYFDKDGSGYITSDELQQACDEFGIEDVRLEDMIGEVDQDNVRSSKNQSYNFALLLGLATLTMKDYLPSVNLMCFVLFFFLQDGRIDYNEFVAMMQKTTTGFGKKGGHNFSGFRDALKSHS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_12g0486600 RBH 0.0 0.0 0.386475
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g30150 RBH 0.0 0.0 0.232620
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_12g0013530 RBH 0.0 0.0 0.320132
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_12g0013700 RBH 0.0 0.0 1.281550
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_12g0013590 RBH 0.0 0.0 1.879180
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_12g0013420 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_12g0004880 SBH 18.846184 37.247265 45.683155
Minghui 63 | MH63RS3 | HZAU OsMH63_12G0249000 RBH 0 0.0113195 0.12024
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_12g0004860 SBH 0.868189 2.087355 3.530438
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_12G0270300 RBH 0 0 0.230031
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_12g0013210 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_12g0004920 SBH 2.059863 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0013410 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0013380 RBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_12g0013570 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_12G013270 RBH 0.0 0.0 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_12g0013090 RBH 0.0 0.0 1.628207
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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