Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os12g0423313 | OGI:12036070 | 1/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr12:13386281-13386559 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAGCGCGGAGTCCGCTTGGCAGGCGGCAGGAGCTGCGGGCAAGTGCTTGCTTGGTAGGCCAACAGCCCTGTGAACCGGGCGGGGCACCTCCGGTTATAGATGCCCTAACAAAACTTCATAAGAAGATATCGCGAGAAATAGTTGAGGATCGAACTCTATCTCAAAAGAGAAATCGATGTTTTACTACCAGTCACAAGCTTTATGTTCGGCACAGTACTCATACTGGAACTTACGAGCAAGAATTGCGGATAAGGGAAAGCCCGCTATATTATATATAG |
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| CDS seq | CTAGCGCGGAGTCCGCTTGGCAGGCGGCAGGAGCTGCGGGCAAGTGCTTGCTTGGTAGGCCAACAGCCCTGTGAACCGGGCGGGGCACCTCCGGTTATAGATGCCCTAACAAAACTTCATAAGAAGATATCGCGAGAAATAGTTGAGGATCGAACTCTATCTCAAAAGAGAAATCGATGTTTTACTACCAGTCACAAGCTTTATGTTCGGCACAGTACTCATACTGGAACTTACGAGCAAGAATTGCGGATAAGGGAAAGCCCGCTATATTATATATAG |
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| Protein seq | LARSPLGRRQELRASACLVGQQPCEPGGAPPVIDALTKLHKKISREIVEDRTLSQKRNRCFTTSHKLYVRHSTHTGTYEQELRIRESPLYYI |
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| Function | NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [UniProtKB/Swiss-Prot:P26304] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os12g0423313 | Os12t0423313-00 | Chr12 | 13386281 | 13386559 | + | irgsp1_rep | ||
| CDS seq | CTAGCGCGGAGTCCGCTTGGCAGGCGGCAGGAGCTGCGGGCAAGTGCTTGCTTGGTAGGCCAACAGCCCTGTGAACCGGGCGGGGCACCTCCGGTTATAGATGCCCTAACAAAACTTCATAAGAAGATATCGCGAGAAATAGTTGAGGATCGAACTCTATCTCAAAAGAGAAATCGATGTTTTACTACCAGTCACAAGCTTTATGTTCGGCACAGTACTCATACTGGAACTTACGAGCAAGAATTGCGGATAAGGGAAAGCCCGCTATATTATATATAG
More
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| Protein seq | LARSPLGRRQELRASACLVGQQPCEPGGAPPVIDALTKLHKKISREIVEDRTLSQKRNRCFTTSHKLYVRHSTHTGTYEQELRIRESPLYYI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0423313 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0423484 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0010010 | SBH | 39.961620 | 0.000000 | 43.583096 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0010230 | SBH | 53.883553 | 8.678103 | 52.033134 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0010160 | SBH | 95.609428 | 8.143538 | 72.956848 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0009900 | SBH | 26.292580 | 0.795064 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | NA | NA | NA | NA | NA |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0009840 | SBH | 465.771545 | 38.300346 | 193.190689 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0009760 | SBH | 134.408096 | 6.130223 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0010020 | SBH | 285.373352 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0009970 | SBH | 1459.176636 | 558.825500 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0009920 | SBH | 4.013259 | 0.0 | 0.806385 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0010010 | SBH | 118.832581 | 77.996162 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G009760 | SBH | 12.538786 | 1.889627 | 15.770505 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0009690 | SBH | 450.256531 | 266.129089 | 1073.055176 |
