Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os11g0657700 | OGI:11058430 | 12/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:26342635-26342970 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AACCACCAAGGAGCTTGGAACCATAATACATACTCTGAACCCGATGGACACCGACGGCAGCAGTAGCATTGACTTCCACAAGTTCCTAAGCCTAATAGCGTGCTAAAGGACAAATACTGATAGGAGGGGCAGAGGGAGATGTTCCGCTTCTTCAGCAAGGAGTAGAAAATTACTTCATCTCTAACGCCAAGCCCTGCCATGTCATGTCCAATGTATCAGGAGAGGCTCACTAATGAGGAGGTCGACGAGATGATCCATGAGACCGATGGTAGCAAGCGGATCAACTATAACGAGTTCGTAAGTGAATTCATAAAAAAAATAAAACAAGCAATTTGA |
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| CDS seq | AAAATTACTTCATCTCTAACGCCAAGCCCTGCCATGTCATGTCCAATGTATCAGGAGAGGCTCACTAATGAGGAGGTCGACGAGATGATCCATGAGACCGATGGTAGCAAGCGGATCAACTATAACGAGTTCGTAAGTGAATTCATAAAAAAAATAAAACAAGCAATTTGA |
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| Protein seq | KITSSLTPSPAMSCPMYQERLTNEEVDEMIHETDGSKRINYNEFVSEFIKKIKQAI |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os11g0657700 | Os11t0657700-00 | Chr11 | 26342635 | 26342970 | + | irgsp1_rep | ||
| CDS seq | AAAATTACTTCATCTCTAACGCCAAGCCCTGCCATGTCATGTCCAATGTATCAGGAGAGGCTCACTAATGAGGAGGTCGACGAGATGATCCATGAGACCGATGGTAGCAAGCGGATCAACTATAACGAGTTCGTAAGTGAATTCATAAAAAAAATAAAACAAGCAATTTGA |
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| Protein seq | KITSSLTPSPAMSCPMYQERLTNEEVDEMIHETDGSKRINYNEFVSEFIKKIKQAI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0657700 | SBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0691190 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0016330 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0005000 | SBH | 0.104517 | 0.2624415 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0016580 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0016530 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0016510 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0016140 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0015920 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0016220 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
