Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os11g0637100 | OGI:11072070 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:25160019-25161761 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GCTCAATCACTTGGAGAAGACCATGTCCATGTTCTCCAAGCTTCTCCCCCTCGTCTCCGGCAGCCACACGTAGACGAACACGCACGCCGCCGCCGCCACGCCGGCGTAGAGGAAGAAGCACCCGGCCATGGTGATCCCGTCGGCGAGCGATATGAACGTCATGGTCACCGCGCCGCATGCCAGCCGGTTCACCGCCACGCCGAGCCCCGTGCCCTGCGCGCGCAGCCGCAGCGGCATCACCTCCGCCGTGTACGTCGCCGTCGTCGGCCCGAGCCCGACGGAGAACGCCGCCACGAACGCCACCACGGACGCCACGCACGCCGCGGAGCTCGCCGTGGACGGCGGCGACGCGACGCGGAGCGTGAGGGCGAGCGAGGTCAGGGTGACGGCCATGCCGCCCGTGCTGGCGAGCAGGAGCGGGCGGCGGCCGAGGCGGTCGGAGAGGAGCGTGGCGACGAGGATGAAGCACGTCTTGACGACGCCGATGGCGATGGTGGCGCCCAGGACGGAGGTGTTCGACGCCATGCCTGCCTTCTTGAACACCAGCGGGCTGTACAGCACGATGGCGTCGATGCCGGACGCTTGCTGGAAGAACTGTAACCCGATGACGGTGGCGAGGATGCGCCGGACCATGGCCGACGGCCGGAAGAGCAGCTCCCGCCACACGCCGCCGCCCGCATCGTGCGGCTCCGCGACGGCGTGCTTGATCTCCTCGAGGCGGAGGTCGGCCTCCTCGGCGGAGTCGGAGGTGCGTGCGAGCACGACGCGCGCGTCGGCGTGGCGACCGCGCATGGCGAGCCAGCGCGGCGACTCCGGCATGGCGAGCACGGCCGCGGCGAGGAACACGGGCGGGACCGCTCCGATGGCGAACATGACGCGCCAGCCGAGGTGCACCGGCAGGCCGGCGAAGGCGTAGTTCGACACGTAGCTGAGCAGGATGCCGACGTTGATGAACATCTGCACGAGGCGAGAGCGAGATCGATCAATGGAGGCCTAACAAGGTGTTCGACACTGGAAGGACGACGACAGATTCTACATGGCCAGATCGACGGACGCATATATACGTACGTCAAGCAACGAGGTCAAGACGCCGCGAGTCGACGCCGGCGAGATCTCGGCGTTGTACACGGGCGCGACGACGCGGGCGAACCCGACGCCGACGCTGGTCACGAACCGCGCCGCCATGAGCGCGGCGTAGGTGGCGCCGAGCGACATGGCGAGCGCGCCGGCCATGAGGAACGCGTTCGCCAGCACGATCGTGCCGCGGCGGCCCAGCGTGTCCGCCGCCCAGCCGGCGGCGAGGATGGACGCCAGCATGAACACGTTCATGGACCCGGCGAGCACCTCGATCTCGGCGTCGCTCAGCCCCATGTCCTCCCGGACGAACAGCTGCGCGCCGCTCATCAGCGCGAGATCTGCAAGCACACACAACACGATCGAACTACCTCCATGGATGTGTTGCCAAGAACTCGATGAGTGCACGTACTGTAGCCCATGAGGATGGTGGTCATGGAGGCGAGCGTGGCGCAGCCGAAGGCGAACATGTTGCGGCGGCGCCGGGGCTCGTCGTCGTTGTCGCCGGACGGCGTGAGGAGCGGCGCGGCGGCGTCGCCGTCGCTCGCCATGGCGAGGTTTGGTTTGGGCGAGAGCTAAGCTGTGTGTGTGGTGTGAAGCGAATGGGATTAAAAGCAGGGCGACATACTGACAACAGTGACCTACATCATCATGGTGGGCAACCTCCGA
More
|
||||||||||
| CDS seq | TCGGAGGTTGCCCACCATGATGATGTAGGTCACTGTTGTCAGTATGTCGCCCTGCTTTTAATCCCATTCGCTTCACACCACACACACAGCTTAGCTCTCGCCCAAACCAAACCTCGCCATGGCGAGCGACGGCGACGCCGCCGCGCCGCTCCTCACGCCGTCCGGCGACAACGACGACGAGCCCCGGCGCCGCCGCAACATGTTCGCCTTCGGCTGCGCCACGCTCGCCTCCATGACCACCATCCTCATGGGCTACAGTACGTGCACTCATCGAGTTCTTGGCAACACATCCATGGAGGTAGTTCGATCGTGTTGTGTGTGCTTGCAGATCTCGCGCTGATGAGCGGCGCGCAGCTGTTCGTCCGGGAGGACATGGGGCTGAGCGACGCCGAGATCGAGGTGCTCGCCGGGTCCATGAACGTGTTCATGCTGGCGTCCATCCTCGCCGCCGGCTGGGCGGCGGACACGCTGGGCCGCCGCGGCACGATCGTGCTGGCGAACGCGTTCCTCATGGCCGGCGCGCTCGCCATGTCGCTCGGCGCCACCTACGCCGCGCTCATGGCGGCGCGGTTCGTGACCAGCGTCGGCGTCGGGTTCGCCCGCGTCGTCGCGCCCGTGTACAACGCCGAGATCTCGCCGGCGTCGACTCGCGGCGTCTTGACCTCGTTGCTTGACATGTTCATCAACGTCGGCATCCTGCTCAGCTACGTGTCGAACTACGCCTTCGCCGGCCTGCCGGTGCACCTCGGCTGGCGCGTCATGTTCGCCATCGGAGCGGTCCCGCCCGTGTTCCTCGCCGCGGCCGTGCTCGCCATGCCGGAGTCGCCGCGCTGGCTCGCCATGCGCGGTCGCCACGCCGACGCGCGCGTCGTGCTCGCACGCACCTCCGACTCCGCCGAGGAGGCCGACCTCCGCCTCGAGGAGATCAAGCACGCCGTCGCGGAGCCGCACGATGCGGGCGGCGGCGTGTGGCGGGAGCTGCTCTTCCGGCCGTCGGCCATGGTCCGGCGCATCCTCGCCACCGTCATCGGGTTACAGTTCTTCCAGCAAGCGTCCGGCATCGACGCCATCGTGCTGTACAGCCCGCTGGTGTTCAAGAAGGCAGGCATGGCGTCGAACACCTCCGTCCTGGGCGCCACCATCGCCATCGGCGTCGTCAAGACGTGCTTCATCCTCGTCGCCACGCTCCTCTCCGACCGCCTCGGCCGCCGCCCGCTCCTGCTCGCCAGCACGGGCGGCATGGCCGTCACCCTGACCTCGCTCGCCCTCACGCTCCGCGTCGCGTCGCCGCCGTCCACGGCGAGCTCCGCGGCGTGCGTGGCGTCCGTGGTGGCGTTCGTGGCGGCGTTCTCCGTCGGGCTCGGGCCGACGACGGCGACGTACACGGCGGAGGTGATGCCGCTGCGGCTGCGCGCGCAGGGCACGGGGCTCGGCGTGGCGGTGAACCGGCTGGCATGCGGCGCGGTGACCATGACGTTCATATCGCTCGCCGACGGGATCACCATGGCCGGGTGCTTCTTCCTCTACGCCGGCGTGGCGGCGGCGGCGTGCGTGTTCGTCTACGTGTGGCTGCCGGAGACGAGGGGGAGAAGCTTGGAGAACATGGACATGGTCTTCTCCAAGTGA
More
|
||||||||||
| Protein seq | SEVAHHDDVGHCCQYVALLLIPFASHHTHSLALAQTKPRHGERRRRRRAAPHAVRRQRRRAPAPPQHVRLRLRHARLHDHHPHGLQYVHSSSSWQHIHGGSSIVLCVLADLALMSGAQLFVREDMGLSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLANAFLMAGALAMSLGATYAALMAARFVTSVGVGFARVVAPVYNAEISPASTRGVLTSLLDMFINVGILLSYVSNYAFAGLPVHLGWRVMFAIGAVPPVFLAAAVLAMPESPRWLAMRGRHADARVVLARTSDSAEEADLRLEEIKHAVAEPHDAGGGVWRELLFRPSAMVRRILATVIGLQFFQQASGIDAIVLYSPLVFKKAGMASNTSVLGATIAIGVVKTCFILVATLLSDRLGRRPLLLASTGGMAVTLTSLALTLRVASPPSTASSAACVASVVAFVAAFSVGLGPTTATYTAEVMPLRLRAQGTGLGVAVNRLACGAVTMTFISLADGITMAGCFFLYAGVAAAACVFVYVWLPETRGRSLENMDMVFSK |
||||||||||
| Function | Polyol transporter 5 [UniProtKB/Swiss-Prot:Q8VZ80] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os11g0637100 | Os11t0637100-00 | Chr11 | 25160019 | 25161761 | - | irgsp1_rep | ||
| CDS seq | TCGGAGGTTGCCCACCATGATGATGTAGGTCACTGTTGTCAGTATGTCGCCCTGCTTTTAATCCCATTCGCTTCACACCACACACACAGCTTAGCTCTCGCCCAAACCAAACCTCGCCATGGCGAGCGACGGCGACGCCGCCGCGCCGCTCCTCACGCCGTCCGGCGACAACGACGACGAGCCCCGGCGCCGCCGCAACATGTTCGCCTTCGGCTGCGCCACGCTCGCCTCCATGACCACCATCCTCATGGGCTACAGTACGTGCACTCATCGAGTTCTTGGCAACACATCCATGGAGGTAGTTCGATCGTGTTGTGTGTGCTTGCAGATCTCGCGCTGATGAGCGGCGCGCAGCTGTTCGTCCGGGAGGACATGGGGCTGAGCGACGCCGAGATCGAGGTGCTCGCCGGGTCCATGAACGTGTTCATGCTGGCGTCCATCCTCGCCGCCGGCTGGGCGGCGGACACGCTGGGCCGCCGCGGCACGATCGTGCTGGCGAACGCGTTCCTCATGGCCGGCGCGCTCGCCATGTCGCTCGGCGCCACCTACGCCGCGCTCATGGCGGCGCGGTTCGTGACCAGCGTCGGCGTCGGGTTCGCCCGCGTCGTCGCGCCCGTGTACAACGCCGAGATCTCGCCGGCGTCGACTCGCGGCGTCTTGACCTCGTTGCTTGACATGTTCATCAACGTCGGCATCCTGCTCAGCTACGTGTCGAACTACGCCTTCGCCGGCCTGCCGGTGCACCTCGGCTGGCGCGTCATGTTCGCCATCGGAGCGGTCCCGCCCGTGTTCCTCGCCGCGGCCGTGCTCGCCATGCCGGAGTCGCCGCGCTGGCTCGCCATGCGCGGTCGCCACGCCGACGCGCGCGTCGTGCTCGCACGCACCTCCGACTCCGCCGAGGAGGCCGACCTCCGCCTCGAGGAGATCAAGCACGCCGTCGCGGAGCCGCACGATGCGGGCGGCGGCGTGTGGCGGGAGCTGCTCTTCCGGCCGTCGGCCATGGTCCGGCGCATCCTCGCCACCGTCATCGGGTTACAGTTCTTCCAGCAAGCGTCCGGCATCGACGCCATCGTGCTGTACAGCCCGCTGGTGTTCAAGAAGGCAGGCATGGCGTCGAACACCTCCGTCCTGGGCGCCACCATCGCCATCGGCGTCGTCAAGACGTGCTTCATCCTCGTCGCCACGCTCCTCTCCGACCGCCTCGGCCGCCGCCCGCTCCTGCTCGCCAGCACGGGCGGCATGGCCGTCACCCTGACCTCGCTCGCCCTCACGCTCCGCGTCGCGTCGCCGCCGTCCACGGCGAGCTCCGCGGCGTGCGTGGCGTCCGTGGTGGCGTTCGTGGCGGCGTTCTCCGTCGGGCTCGGGCCGACGACGGCGACGTACACGGCGGAGGTGATGCCGCTGCGGCTGCGCGCGCAGGGCACGGGGCTCGGCGTGGCGGTGAACCGGCTGGCATGCGGCGCGGTGACCATGACGTTCATATCGCTCGCCGACGGGATCACCATGGCCGGGTGCTTCTTCCTCTACGCCGGCGTGGCGGCGGCGGCGTGCGTGTTCGTCTACGTGTGGCTGCCGGAGACGAGGGGGAGAAGCTTGGAGAACATGGACATGGTCTTCTCCAAGTGA
More
|
|||||||
| Protein seq | SEVAHHDDVGHCCQYVALLLIPFASHHTHSLALAQTKPRHGERRRRRRAAPHAVRRQRRRAPAPPQHVRLRLRHARLHDHHPHGLQYVHSSSSWQHIHGGSSIVLCVLADLALMSGAQLFVREDMGLSDAEIEVLAGSMNVFMLASILAAGWAADTLGRRGTIVLANAFLMAGALAMSLGATYAALMAARFVTSVGVGFARVVAPVYNAEISPASTRGVLTSLLDMFINVGILLSYVSNYAFAGLPVHLGWRVMFAIGAVPPVFLAAAVLAMPESPRWLAMRGRHADARVVLARTSDSAEEADLRLEEIKHAVAEPHDAGGGVWRELLFRPSAMVRRILATVIGLQFFQQASGIDAIVLYSPLVFKKAGMASNTSVLGATIAIGVVKTCFILVATLLSDRLGRRPLLLASTGGMAVTLTSLALTLRVASPPSTASSAACVASVVAFVAAFSVGLGPTTATYTAEVMPLRLRAQGTGLGVAVNRLACGAVTMTFISLADGITMAGCFFLYAGVAAAACVFVYVWLPETRGRSLENMDMVFSK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0637100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g41840 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0637200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021360 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0021310 | SBH | 0.0 | 0.202935 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0021230 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0020690 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0021220 | SBH | 0.0 | 1.675495 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0379500 | RBH | 0.1081065 | 0.238486 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0021660 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0399000 | RBH | 0.047494 | 0.283948 | 0.078225 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0021560 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0021690 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0021300 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0020910 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021060 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G021040 | RBH | 0.0 | 0.0 | 0.196004 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0021590 | RBH | 0.0 | 2.967759 | 0.0 |
