Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os11g0631100 | OGI:11070840 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:24756166-24757242 | ||||||||
| Gene Symbol | OsMB53, MB53, OsM10, M10, OsM10a, OsMB51, MB51 | ||||||||||
| DNA seq | ATGTCTACCAAGAAATCCGGCGCCGCCGACGTCCAGCCATCGCCGTCGTCGTGCTCGACCATCGTCGTCACCGAGGCGAGCGGCCACCACGTCCTCAAGATCGATGGTTACACGAGGACGACGATGATGGTCGCCACCGGCGAACACCTCGACTCCGGCGAGTTCCACGTCGGCGGCTACGCCTGGCATCTCCGGTACTACCCCAACGGCTACGACCAGGAGTTCTCGAGCTCGATATCCTTCGCTCTCGTCCGGACCGCCGGCGCCGGCGACAATGTCCGTCTCCATGCGAGAGCCAAGATCAGCTTGCTCGACCTCGCCGGCGAGCCGGTGGCACGGTACAGCCAACCCGTCGACAAGTGTTCCACCTCCAAGGCAAGCGATCCATGGGTTTGCAAGAGCTTCATCGAGAGGGATGAGCTGGAGAAGTCCGGCCATGTCGTCGGCGACCGCCTCGCCGTCCGGTGCGACCTCACCTTCAACGTGCAGGACCGCCTGGTGAGGGAGCTCGTCGCCGTGCCGCCGCCCCTCCTGCGCCGCCACATCGGCGAGCTCCTCGGCGACGCCAGGACGTCCGACGTGAGGTTCAAGGTCGGCGGCGAGACGTTCCCGGCGCACCGGTGCGTCCTCGCGGCGCGGTCGCCGGTGTTCAGGGCGGAGCTCCTCGGCCCCATGAGGGAGCACGCCGCGACGACCATCCGCGTCGACGACATGGACGCCTCCGTGTTCGCCGCTCTGCTGCGCTTCGTCTACACCGACGAGCTGCCGGAGCTGGACGGCGGCAGCGCGGCGGCGATGGCGCAGCACCTGCTGGTGGCGGCGGACAGGTACGACATGGAGAGGCTGAAGAAGGTGTGCGAGGACAGGATGGTCAGGCACCTCGACGTCGGCACGGCGGCGACGTCGCTGGCGTTGGCCGAGCAGCACGATTGCCCTGAGCTCAAGAAGGCCATCCTGAGGTTCATGGCGTCGCCGGCGAGGTTGAAGGCGGTCATGGCGAGCGATGGGTATGAGCACCTGGTGACAAGCTTCCCCTCCATAGCCACGGAGATTCTTGCAATGTTTGCTGCACATTGA
More
|
||||||||||
| CDS seq | ATGTCTACCAAGAAATCCGGCGCCGCCGACGTCCAGCCATCGCCGTCGTCGTGCTCGACCATCGTCGTCACCGAGGCGAGCGGCCACCACGTCCTCAAGATCGATGGTTACACGAGGACGACGATGATGGTCGCCACCGGCGAACACCTCGACTCCGGCGAGTTCCACGTCGGCGGCTACGCCTGGCATCTCCGGTACTACCCCAACGGCTACGACCAGGAGTTCTCGAGCTCGATATCCTTCGCTCTCGTCCGGACCGCCGGCGCCGGCGACAATGTCCGTCTCCATGCGAGAGCCAAGATCAGCTTGCTCGACCTCGCCGGCGAGCCGGTGGCACGGTACAGCCAACCCGTCGACAAGTGTTCCACCTCCAAGGCAAGCGATCCATGGGTTTGCAAGAGCTTCATCGAGAGGGATGAGCTGGAGAAGTCCGGCCATGTCGTCGGCGACCGCCTCGCCGTCCGGTGCGACCTCACCTTCAACGTGCAGGACCGCCTGGTGAGGGAGCTCGTCGCCGTGCCGCCGCCCCTCCTGCGCCGCCACATCGGCGAGCTCCTCGGCGACGCCAGGACGTCCGACGTGAGGTTCAAGGTCGGCGGCGAGACGTTCCCGGCGCACCGGTGCGTCCTCGCGGCGCGGTCGCCGGTGTTCAGGGCGGAGCTCCTCGGCCCCATGAGGGAGCACGCCGCGACGACCATCCGCGTCGACGACATGGACGCCTCCGTGTTCGCCGCTCTGCTGCGCTTCGTCTACACCGACGAGCTGCCGGAGCTGGACGGCGGCAGCGCGGCGGCGATGGCGCAGCACCTGCTGGTGGCGGCGGACAGGTACGACATGGAGAGGCTGAAGAAGGTGTGCGAGGACAGGATGGTCAGGCACCTCGACGTCGGCACGGCGGCGACGTCGCTGGCGTTGGCCGAGCAGCACGATTGCCCTGAGCTCAAGAAGGCCATCCTGAGGTTCATGGCGTCGCCGGCGAGGTTGAAGGCGGTCATGGCGAGCGATGGGTATGAGCACCTGGTGACAAGCTTCCCCTCCATAGCCACGGAGATTCTTGCAATGTTTGCTGCACATTGA
More
|
||||||||||
| Protein seq | MSTKKSGAADVQPSPSSCSTIVVTEASGHHVLKIDGYTRTTMMVATGEHLDSGEFHVGGYAWHLRYYPNGYDQEFSSSISFALVRTAGAGDNVRLHARAKISLLDLAGEPVARYSQPVDKCSTSKASDPWVCKSFIERDELEKSGHVVGDRLAVRCDLTFNVQDRLVRELVAVPPPLLRRHIGELLGDARTSDVRFKVGGETFPAHRCVLAARSPVFRAELLGPMREHAATTIRVDDMDASVFAALLRFVYTDELPELDGGSAAAMAQHLLVAADRYDMERLKKVCEDRMVRHLDVGTAATSLALAEQHDCPELKKAILRFMASPARLKAVMASDGYEHLVTSFPSIATEILAMFAAH |
||||||||||
| Function | BTB/POZ and MATH domain-containing protein 2 [UniProtKB/Swiss-Prot:Q9M8J9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os11g0631100 | Os11t0631100-00 | Chr11 | 24756166 | 24757242 | + | irgsp1_rep | ||
| CDS seq | ATGTCTACCAAGAAATCCGGCGCCGCCGACGTCCAGCCATCGCCGTCGTCGTGCTCGACCATCGTCGTCACCGAGGCGAGCGGCCACCACGTCCTCAAGATCGATGGTTACACGAGGACGACGATGATGGTCGCCACCGGCGAACACCTCGACTCCGGCGAGTTCCACGTCGGCGGCTACGCCTGGCATCTCCGGTACTACCCCAACGGCTACGACCAGGAGTTCTCGAGCTCGATATCCTTCGCTCTCGTCCGGACCGCCGGCGCCGGCGACAATGTCCGTCTCCATGCGAGAGCCAAGATCAGCTTGCTCGACCTCGCCGGCGAGCCGGTGGCACGGTACAGCCAACCCGTCGACAAGTGTTCCACCTCCAAGGCAAGCGATCCATGGGTTTGCAAGAGCTTCATCGAGAGGGATGAGCTGGAGAAGTCCGGCCATGTCGTCGGCGACCGCCTCGCCGTCCGGTGCGACCTCACCTTCAACGTGCAGGACCGCCTGGTGAGGGAGCTCGTCGCCGTGCCGCCGCCCCTCCTGCGCCGCCACATCGGCGAGCTCCTCGGCGACGCCAGGACGTCCGACGTGAGGTTCAAGGTCGGCGGCGAGACGTTCCCGGCGCACCGGTGCGTCCTCGCGGCGCGGTCGCCGGTGTTCAGGGCGGAGCTCCTCGGCCCCATGAGGGAGCACGCCGCGACGACCATCCGCGTCGACGACATGGACGCCTCCGTGTTCGCCGCTCTGCTGCGCTTCGTCTACACCGACGAGCTGCCGGAGCTGGACGGCGGCAGCGCGGCGGCGATGGCGCAGCACCTGCTGGTGGCGGCGGACAGGTACGACATGGAGAGGCTGAAGAAGGTGTGCGAGGACAGGATGGTCAGGCACCTCGACGTCGGCACGGCGGCGACGTCGCTGGCGTTGGCCGAGCAGCACGATTGCCCTGAGCTCAAGAAGGCCATCCTGAGGTTCATGGCGTCGCCGGCGAGGTTGAAGGCGGTCATGGCGAGCGATGGGTATGAGCACCTGGTGACAAGCTTCCCCTCCATAGCCACGGAGATTCTTGCAATGTTTGCTGCACATTGA
More
|
|||||||
| Protein seq | MSTKKSGAADVQPSPSSCSTIVVTEASGHHVLKIDGYTRTTMMVATGEHLDSGEFHVGGYAWHLRYYPNGYDQEFSSSISFALVRTAGAGDNVRLHARAKISLLDLAGEPVARYSQPVDKCSTSKASDPWVCKSFIERDELEKSGHVVGDRLAVRCDLTFNVQDRLVRELVAVPPPLLRRHIGELLGDARTSDVRFKVGGETFPAHRCVLAARSPVFRAELLGPMREHAATTIRVDDMDASVFAALLRFVYTDELPELDGGSAAAMAQHLLVAADRYDMERLKKVCEDRMVRHLDVGTAATSLALAEQHDCPELKKAILRFMASPARLKAVMASDGYEHLVTSFPSIATEILAMFAAH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0631100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g41300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0630700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021050 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0021000 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0020900 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0020370 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0020910 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0370800 | RBH | 0 | 0 | 0.0256485 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0021390 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0392200 | RBH | 0 | 0 | 0.01226 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0021180 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0021310 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0021010 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0020630 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0020750 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G020760 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0021170 | RBH | 0.0 | 0.0 | 0.0 |
