Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os11g0579100 OGI:11063960 | 15/16 Nipponbare | IRGSP 1.0 | RAP-db Chr11:21860467-21863246
Gene Symbol -
DNA seq

GCAACTAAACCAAACTGAAAGCAATGGAAACAATATTACAATATGAGATTGCCATTAACACTCGAAACATAAAGGTGCAATACCAGTCCAACATGACAGATGGAAGAGGAAAAACATCTTTATTCCATAGTAGAAGCAGCCGTAGTAGAATTTAGAAATACTCCCCAGGATTACGGAGTTCCATCTTTCTCAGCATTGATGATTATGGGGTACGATAGCACCTACAGCCTTGATCCTTGGCCATTCTCAGGTGGATTGAGCGTGAAAGTAATCCCACATTCATCTACTTCTCTTTTCAGTTTTTCCAGATTCTGTAGGTGCCATGTTCTCCCATTGAGTTCGATGTGTGTCAGACTCTGCAGCGTACTGACCCCTGAAAGCTCCTCCATGTGAGTGAAGGACCAAACTATCTTTTCAAGTTTATCAGGGTCTCCACCATAAGTATTATTACCCAAGGCGACACTGTTAACAATATCATCTTCAATGACAAGATCCACAAGTTCCACAAACTTCACGAAGCTCAGAGCGCCTTCTGCGAATGAATGGTAGCAAAGCCTGAGATAGCGTAGGCCTTTGAGCATGCTAAGTATATCGAGGGCACCCTGATTCAAAAAGGTGTCACGTAGAGTTATCTTGGCAAGCTGATGGAGCTCCTTGATCCTGGGAGGCAACCCGCTTCTGATGCTGCAGATGTGTAGGCTCTCCAGAAGCTTTGGAGGTCTCAATAAAATAACATCAATAGAATCCCAGTTACCTGGTGGATCCATTCGGATTGATAAGGACCGAAGACATCTGTGGAGTTTGTCAACCTGAAGGAACAAATCTATCAAGCTAGCTTTCTTGCCAGATAGAACCACACCCAACTTCTTTAGGTGCTCGAGCTTGTCACCAATGTTGTTCAGTTCTTTAGCACTGTTCGAAACCTTGACACGGGACAATATCTCCATCTTTTCCATAGTTGCAACAGCACGAGGCATGGAAACCGTGGAGAATGATTCCTTGGACTTGATGATGTCTTCCTTTGGGTAGTCAATAATGCAACCAGCAAGCAGGTGCTTTAGCATTGGTAGCGCCGTGTGGAACACTTGTACCCTTGTTCCTCGGATGTCAAGTGTCTCTAAGAGCTTGAGCTGACCTATTTCCTTGGGCAGTTGGGCAATATCTGTGTTCCGGAGACTTAGATACTTGAGTTTATGAATCTTGCATACGGTATGGAGGTCGCCTGCCTTGAGGCCCTTGCGACCTTCCAAATCAAGTACTGTCAGCAGCAACCTTGAACTGCTGGAAAGTGAGTTCAAGAACTTTTTGATATTAGAGTTTGCCGGATGGAGTTGCATGCCGTGCCGGATTGAGTAGAGGAGATCCAAGTCAAGTGGCAGCTGGTTGTTGAGCAATAGGTCCTCAACTGTCGAAGACTCCCTGCTGATCAAGCCAGAAACTACTGGATGCACGGTGCAGCTCTTTACCTTGCGTGTACCACTAAGACCAGAAGAAACAATAAGCTTCTGGCTGTGCATGGCTTCGAAACAGTGCCCGGCTTCGTCCTCTGCACTTGACTGGTTCACTTGGGCTATCAAGCCTTGGGCAATCCATCGTCTTATTAAACTTGCCCTTCGGACGCCGCTTCCACGGGCGAAAATGGTTGAATACCATAAGCAGTTCTTGTAACTATTTGGCAGTGCTTGGTAGCAGAAGGCCATTATTCGGTCCTGTCTCCCATGATCTGTAAATTCTTTACCAAGGCTTATATTCAGGAACTGCAGTTGGTGTTTCGTCATGTCAGGATTGTAGTAGAGGGCATGGAGGAGCATCTTCATGCAGAAGACATCAAGGCAACACTTGGCGAGGATGTTGCGCAGAATTTCTTTCAAGTGTCCTTCCTCGTATCCGTAGCTGTGGGAAAGCAGGGCGAGCGCTCTGTTGAGGTAAATATCAACGAGAGAGTAGATTATCTGAGGCCCATCGTTGGCAGAGTCATTGCTGCAGCAATATTTTGCCATCTTACTATCGTTTGTGCAGAGTACTACTGCACAGTCAGAGCAGCTCATCGAGGTCAGCAAATCCAGAACCTGGTTCCATAACGCTGGGTAATTAAAACCGGAAAGAACAAGCAGCACATCTTCATCTTTCAATTTATGGCCAAGCCACTCCCTGTCTTCCGCCTCATTCTTCTCATCATCCTCCTTCTCTTTCAGCTTTTCAACCATGACCTTTGTAATCTCCGAGAGAATCGGAGGCCGATGGACAGAAACGTGGAGGCAGAGCTGCTGCGACCAGAGTCCCCGCCGTGCCCAGCGGCTCTTGAAACGCTCGATCACGGCCTCTGCAGCAACAGCTTCATCCGTGCCGTCTTGCACACTGATTGTGACGACTCTAATATGCTTCTGCTTCTTGTCGCCGCCGTCTGACTGAGGCGGCTGCTGCTCCGTGTCGCCTCCATCCGGCTGCGGCGGCGGCGGCTGATCGCTGCCGTCTGACTGGGGCGGCGGCTGCTGCTTGTCATCACCGTCCGACTGGGGCGGCAGCTGCCGCTTGACGCCGCAGTCGGGAGGAAGCGGCTGGTCCTTGTCGCCACCATCCGACAGCGAAGGAGGCGGCTGCTCCTTGTCGCCTCCATCTGACTGCGGAGGCAGTGGCTGCTGCTGCTTGATGCCATTGCCGCCTCCGGATTGGGGAGGCGGCAGCTGCTCCTTGTTTCTGCCATCCGACTGCGGCGCTAGGGGCTGCTCCTTGCCACCGTCGCTGTTCAACTGAGGCCGTGGCTGCTGCTCGTCATCGCT

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CDS seq

AGCGATGACGAGCAGCAGCCACGGCCTCAGTTGAACAGCGACGGTGGCAAGGAGCAGCCCCTAGCGCCGCAGTCGGATGGCAGAAACAAGGAGCAGCTGCCGCCTCCCCAATCCGGAGGCGGCAATGGCATCAAGCAGCAGCAGCCACTGCCTCCGCAGTCAGATGGAGGCGACAAGGAGCAGCCGCCTCCTTCGCTGTCGGATGGTGGCGACAAGGACCAGCCGCTTCCTCCCGACTGCGGCGTCAAGCGGCAGCTGCCGCCCCAGTCGGACGGTGATGACAAGCAGCAGCCGCCGCCCCAGTCAGACGGCAGCGATCAGCCGCCGCCGCCGCAGCCGGATGGAGGCGACACGGAGCAGCAGCCGCCTCAGTCAGACGGCGGCGACAAGAAGCAGAAGCATATTAGAGTCGTCACAATCAGTGTGCAAGACGGCACGGATGAAGCTGTTGCTGCAGAGGCCGTGATCGAGCGTTTCAAGAGCCGCTGGGCACGGCGGGGACTCTGGTCGCAGCAGCTCTGCCTCCACGTTTCTGTCCATCGGCCTCCGATTCTCTCGGAGATTACAAAGGTCATGGTTGAAAAGCTGAAAGAGAAGGAGGATGATGAGAAGAATGAGGCGGAAGACAGGGAGTGGCTTGGCCATAAATTGAAAGATGAAGATGTGCTGCTTGTTCTTTCCGGTTTTAATTACCCAGCGTTATGGAACCAGGTTCTGGATTTGCTGACCTCGATGAGCTGCTCTGACTGTGCAGTAGTACTCTGCACAAACGATAGTAAGATGGCAAAATATTGCTGCAGCAATGACTCTGCCAACGATGGGCCTCAGATAATCTACTCTCTCGTTGATATTTACCTCAACAGAGCGCTCGCCCTGCTTTCCCACAGCTACGGATACGAGGAAGGACACTTGAAAGAAATTCTGCGCAACATCCTCGCCAAGTGTTGCCTTGATGTCTTCTGCATGAAGATGCTCCTCCATGCCCTCTACTACAATCCTGACATGACGAAACACCAACTGCAGTTCCTGAATATAAGCCTTGGTAAAGAATTTACAGATCATGGGAGACAGGACCGAATAATGGCCTTCTGCTACCAAGCACTGCCAAATAGTTACAAGAACTGCTTATGGTATTCAACCATTTTCGCCCGTGGAAGCGGCGTCCGAAGGGCAAGTTTAATAAGACGATGGATTGCCCAAGGCTTGATAGCCCAAGTGAACCAGTCAAGTGCAGAGGACGAAGCCGGGCACTGTTTCGAAGCCATGCACAGCCAGAAGCTTATTGTTTCTTCTGGTCTTAGTGGTACACGCAAGGTAAAGAGCTGCACCGTGCATCCAGTAGTTTCTGGCTTGATCAGCAGGGAGTCTTCGACAGTTGAGGACCTATTGCTCAACAACCAGCTGCCACTTGACTTGGATCTCCTCTACTCAATCCGGCACGGCATGCAACTCCATCCGGCAAACTCTAATATCAAAAAGTTCTTGAACTCACTTTCCAGCAGTTCAAGGTTGCTGCTGACAGTACTTGATTTGGAAGGTCGCAAGGGCCTCAAGGCAGGCGACCTCCATACCGTATGCAAGATTCATAAACTCAAGTATCTAAGTCTCCGGAACACAGATATTGCCCAACTGCCCAAGGAAATAGGTCAGCTCAAGCTCTTAGAGACACTTGACATCCGAGGAACAAGGGTACAAGTGTTCCACACGGCGCTACCAATGCTAAAGCACCTGCTTGCTGGTTGCATTATTGACTACCCAAAGGAAGACATCATCAAGTCCAAGGAATCATTCTCCACGGTTTCCATGCCTCGTGCTGTTGCAACTATGGAAAAGATGGAGATATTGTCCCGTGTCAAGGTTTCGAACAGTGCTAAAGAACTGAACAACATTGGTGACAAGCTCGAGCACCTAAAGAAGTTGGGTGTGGTTCTATCTGGCAAGAAAGCTAGCTTGATAGATTTGTTCCTTCAGGTTGACAAACTCCACAGATGTCTTCGGTCCTTATCAATCCGAATGGATCCACCAGGTAACTGGGATTCTATTGATGTTATTTTATTGAGACCTCCAAAGCTTCTGGAGAGCCTACACATCTGCAGCATCAGAAGCGGGTTGCCTCCCAGGATCAAGGAGCTCCATCAGCTTGCCAAGATAACTCTACGTGACACCTTTTTGAATCAGGGTGCCCTCGATATACTTAGCATGCTCAAAGGCCTACGCTATCTCAGGCTTTGCTACCATTCATTCGCAGAAGGCGCTCTGAGCTTCGTGAAGTTTGTGGAACTTGTGGATCTTGTCATTGAAGATGATATTGTTAACAGTGTCGCCTTGGGTAATAATACTTATGGTGGAGACCCTGATAAACTTGAAAAGATAGTTTGGTCCTTCACTCACATGGAGGAGCTTTCAGGGGTCAGTACGCTGCAGAGTCTGACACACATCGAACTCAATGGGAGAACATGGCACCTACAGAATCTGGAAAAACTGAAAAGAGAAGTAGATGAATGTGGGATTACTTTCACGCTCAATCCACCTGAGAATGGCCAAGGATCAAGGCTGTAG

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Protein seq

SDDEQQPRPQLNSDGGKEQPLAPQSDGRNKEQLPPPQSGGGNGIKQQQPLPPQSDGGDKEQPPPSLSDGGDKDQPLPPDCGVKRQLPPQSDGDDKQQPPPQSDGSDQPPPPQPDGGDTEQQPPQSDGGDKKQKHIRVVTISVQDGTDEAVAAEAVIERFKSRWARRGLWSQQLCLHVSVHRPPILSEITKVMVEKLKEKEDDEKNEAEDREWLGHKLKDEDVLLVLSGFNYPALWNQVLDLLTSMSCSDCAVVLCTNDSKMAKYCCSNDSANDGPQIIYSLVDIYLNRALALLSHSYGYEEGHLKEILRNILAKCCLDVFCMKMLLHALYYNPDMTKHQLQFLNISLGKEFTDHGRQDRIMAFCYQALPNSYKNCLWYSTIFARGSGVRRASLIRRWIAQGLIAQVNQSSAEDEAGHCFEAMHSQKLIVSSGLSGTRKVKSCTVHPVVSGLISRESSTVEDLLLNNQLPLDLDLLYSIRHGMQLHPANSNIKKFLNSLSSSSRLLLTVLDLEGRKGLKAGDLHTVCKIHKLKYLSLRNTDIAQLPKEIGQLKLLETLDIRGTRVQVFHTALPMLKHLLAGCIIDYPKEDIIKSKESFSTVSMPRAVATMEKMEILSRVKVSNSAKELNNIGDKLEHLKKLGVVLSGKKASLIDLFLQVDKLHRCLRSLSIRMDPPGNWDSIDVILLRPPKLLESLHICSIRSGLPPRIKELHQLAKITLRDTFLNQGALDILSMLKGLRYLRLCYHSFAEGALSFVKFVELVDLVIEDDIVNSVALGNNTYGGDPDKLEKIVWSFTHMEELSGVSTLQSLTHIELNGRTWHLQNLEKLKREVDECGITFTLNPPENGQGSRL

Function Disease resistance protein PIK6-NP [UniProtKB/Swiss-Prot:Q2QZF1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os11g0579100 Os11t0579100-01 Chr11 21860467 21863246 - irgsp1_rep
CDS seq

AGCGATGACGAGCAGCAGCCACGGCCTCAGTTGAACAGCGACGGTGGCAAGGAGCAGCCCCTAGCGCCGCAGTCGGATGGCAGAAACAAGGAGCAGCTGCCGCCTCCCCAATCCGGAGGCGGCAATGGCATCAAGCAGCAGCAGCCACTGCCTCCGCAGTCAGATGGAGGCGACAAGGAGCAGCCGCCTCCTTCGCTGTCGGATGGTGGCGACAAGGACCAGCCGCTTCCTCCCGACTGCGGCGTCAAGCGGCAGCTGCCGCCCCAGTCGGACGGTGATGACAAGCAGCAGCCGCCGCCCCAGTCAGACGGCAGCGATCAGCCGCCGCCGCCGCAGCCGGATGGAGGCGACACGGAGCAGCAGCCGCCTCAGTCAGACGGCGGCGACAAGAAGCAGAAGCATATTAGAGTCGTCACAATCAGTGTGCAAGACGGCACGGATGAAGCTGTTGCTGCAGAGGCCGTGATCGAGCGTTTCAAGAGCCGCTGGGCACGGCGGGGACTCTGGTCGCAGCAGCTCTGCCTCCACGTTTCTGTCCATCGGCCTCCGATTCTCTCGGAGATTACAAAGGTCATGGTTGAAAAGCTGAAAGAGAAGGAGGATGATGAGAAGAATGAGGCGGAAGACAGGGAGTGGCTTGGCCATAAATTGAAAGATGAAGATGTGCTGCTTGTTCTTTCCGGTTTTAATTACCCAGCGTTATGGAACCAGGTTCTGGATTTGCTGACCTCGATGAGCTGCTCTGACTGTGCAGTAGTACTCTGCACAAACGATAGTAAGATGGCAAAATATTGCTGCAGCAATGACTCTGCCAACGATGGGCCTCAGATAATCTACTCTCTCGTTGATATTTACCTCAACAGAGCGCTCGCCCTGCTTTCCCACAGCTACGGATACGAGGAAGGACACTTGAAAGAAATTCTGCGCAACATCCTCGCCAAGTGTTGCCTTGATGTCTTCTGCATGAAGATGCTCCTCCATGCCCTCTACTACAATCCTGACATGACGAAACACCAACTGCAGTTCCTGAATATAAGCCTTGGTAAAGAATTTACAGATCATGGGAGACAGGACCGAATAATGGCCTTCTGCTACCAAGCACTGCCAAATAGTTACAAGAACTGCTTATGGTATTCAACCATTTTCGCCCGTGGAAGCGGCGTCCGAAGGGCAAGTTTAATAAGACGATGGATTGCCCAAGGCTTGATAGCCCAAGTGAACCAGTCAAGTGCAGAGGACGAAGCCGGGCACTGTTTCGAAGCCATGCACAGCCAGAAGCTTATTGTTTCTTCTGGTCTTAGTGGTACACGCAAGGTAAAGAGCTGCACCGTGCATCCAGTAGTTTCTGGCTTGATCAGCAGGGAGTCTTCGACAGTTGAGGACCTATTGCTCAACAACCAGCTGCCACTTGACTTGGATCTCCTCTACTCAATCCGGCACGGCATGCAACTCCATCCGGCAAACTCTAATATCAAAAAGTTCTTGAACTCACTTTCCAGCAGTTCAAGGTTGCTGCTGACAGTACTTGATTTGGAAGGTCGCAAGGGCCTCAAGGCAGGCGACCTCCATACCGTATGCAAGATTCATAAACTCAAGTATCTAAGTCTCCGGAACACAGATATTGCCCAACTGCCCAAGGAAATAGGTCAGCTCAAGCTCTTAGAGACACTTGACATCCGAGGAACAAGGGTACAAGTGTTCCACACGGCGCTACCAATGCTAAAGCACCTGCTTGCTGGTTGCATTATTGACTACCCAAAGGAAGACATCATCAAGTCCAAGGAATCATTCTCCACGGTTTCCATGCCTCGTGCTGTTGCAACTATGGAAAAGATGGAGATATTGTCCCGTGTCAAGGTTTCGAACAGTGCTAAAGAACTGAACAACATTGGTGACAAGCTCGAGCACCTAAAGAAGTTGGGTGTGGTTCTATCTGGCAAGAAAGCTAGCTTGATAGATTTGTTCCTTCAGGTTGACAAACTCCACAGATGTCTTCGGTCCTTATCAATCCGAATGGATCCACCAGGTAACTGGGATTCTATTGATGTTATTTTATTGAGACCTCCAAAGCTTCTGGAGAGCCTACACATCTGCAGCATCAGAAGCGGGTTGCCTCCCAGGATCAAGGAGCTCCATCAGCTTGCCAAGATAACTCTACGTGACACCTTTTTGAATCAGGGTGCCCTCGATATACTTAGCATGCTCAAAGGCCTACGCTATCTCAGGCTTTGCTACCATTCATTCGCAGAAGGCGCTCTGAGCTTCGTGAAGTTTGTGGAACTTGTGGATCTTGTCATTGAAGATGATATTGTTAACAGTGTCGCCTTGGGTAATAATACTTATGGTGGAGACCCTGATAAACTTGAAAAGATAGTTTGGTCCTTCACTCACATGGAGGAGCTTTCAGGGGTCAGTACGCTGCAGAGTCTGACACACATCGAACTCAATGGGAGAACATGGCACCTACAGAATCTGGAAAAACTGAAAAGAGAAGTAGATGAATGTGGGATTACTTTCACGCTCAATCCACCTGAGAATGGCCAAGGATCAAGGCTGTAG

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Protein seq

SDDEQQPRPQLNSDGGKEQPLAPQSDGRNKEQLPPPQSGGGNGIKQQQPLPPQSDGGDKEQPPPSLSDGGDKDQPLPPDCGVKRQLPPQSDGDDKQQPPPQSDGSDQPPPPQPDGGDTEQQPPQSDGGDKKQKHIRVVTISVQDGTDEAVAAEAVIERFKSRWARRGLWSQQLCLHVSVHRPPILSEITKVMVEKLKEKEDDEKNEAEDREWLGHKLKDEDVLLVLSGFNYPALWNQVLDLLTSMSCSDCAVVLCTNDSKMAKYCCSNDSANDGPQIIYSLVDIYLNRALALLSHSYGYEEGHLKEILRNILAKCCLDVFCMKMLLHALYYNPDMTKHQLQFLNISLGKEFTDHGRQDRIMAFCYQALPNSYKNCLWYSTIFARGSGVRRASLIRRWIAQGLIAQVNQSSAEDEAGHCFEAMHSQKLIVSSGLSGTRKVKSCTVHPVVSGLISRESSTVEDLLLNNQLPLDLDLLYSIRHGMQLHPANSNIKKFLNSLSSSSRLLLTVLDLEGRKGLKAGDLHTVCKIHKLKYLSLRNTDIAQLPKEIGQLKLLETLDIRGTRVQVFHTALPMLKHLLAGCIIDYPKEDIIKSKESFSTVSMPRAVATMEKMEILSRVKVSNSAKELNNIGDKLEHLKKLGVVLSGKKASLIDLFLQVDKLHRCLRSLSIRMDPPGNWDSIDVILLRPPKLLESLHICSIRSGLPPRIKELHQLAKITLRDTFLNQGALDILSMLKGLRYLRLCYHSFAEGALSFVKFVELVDLVIEDDIVNSVALGNNTYGGDPDKLEKIVWSFTHMEELSGVSTLQSLTHIELNGRTWHLQNLEKLKREVDECGITFTLNPPENGQGSRL

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_11g0579100 RBH 0.351286 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g37040 RBH 0.109834 0.0 0.015023
Nipponbare | IRGSP 1.0 | RAP-db Os11g0579400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0022450 RBH 0.065690 4.527874 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0022520 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0022220 SBH 0.0 0.728849 0.843563
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0021810 SBH 0.0 0.021789 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0022120 RBH 0.0 0.0 0.000000
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0351000 SBH 2.700993 7.7502165 7.4830095
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0023100 SBH 0.0 0.0 0.122269
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0364000 SBH 0.688953 5.671969 0.410713
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0022640 SBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0022740 SBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0022470 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0021910 RBH 0.0 0.0 0.079602
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0021970 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G022310 SBH 0.0 2.682502 2.665690
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0022790 SBH 0.0 1.142824 1.134597
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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