Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os11g0274700 | OGI:11028180 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:9724410-9728188 | ||||||||
| Gene Symbol | RLCK322, OsRLCK322 | ||||||||||
| DNA seq | AAAACAATTCATACAAGAGAAAAAATAAATTCTTTTAGTTTAAAATGTTACAACAACTCTCATCAAATACATAACGAGTATCTCTAGTTGAACACACAACTTCTATATATGGGAGGCGGTGCATGCGCCGATTTCTTCTGGCTCGATTGATGTGTCAATTATAGGTAGGAAGCACACTTTCAGCTTAATTTAGTTCGCCCACGATAGCCTTTATTTCGGGCCTATCATCTCTGTTCTGATTTAAACACTTCACCGCAATATTGATGCATCTTTTCACTTGATTTATTTCTGCAGATGGATCGTGCGACTTTGCTGTTATCCTCTTTTCCCATTGCTTATACACCTATATATGATATAAAAACAGAATTGTTGCTGTAGTTGTATGCATGAGGAAAAGTGCAAACTATGTGTTCTAATAAAAAATATAGGTCATGTAGACAAATAAATTTTCTTACACGATCAATATATTTAAAACTGTCTTGATCATTCGCTTCACTGAAGTTGTCATAACCAGTAGGCCCAGCAATGATTTCCATGACCATAACTCCAAAACTGAATACATCATACTTATTTGAGATCACGAGTTTATTCAAATACTCAGGCGGCATGTAACGACTGCACGGGGCCAATGGAAGTTAAGGTCATGACCAGTTTATATAAGAAAGTCACAAATTTATTAACTGCAGGGTAAAATAAATTAGGTGCAAGAGGAGATTTCGCTTACGGTGTGCCTGTAGGTTTTGATATTGTTATGTGAGTTTTAGTTCCAGTGAAATGCTTTGATATCCCAAAGTCTGCAATTTTTGGCTCCATGTTCTCATCAAGCAATACATTGGCAGGTTTCAGGTCTAAGTGGAAAATAGGTTTTTCCAATTCATGGAGGTAATTTAATCCTTGGGAAATCACCTTGATTATATTGTATCGTGTGCGCCAGTCAAATCCATCAGATTCAGATTCTTCTGCAATGTAGAGAAAAGAGAGAACTTACGAAAATTATCTCATTTTCGCAACAGAAAATATGTCCGGAATTGTATGTAGGAACTTACTATCCAGATGCTTGTCAAGGCTTCCACCTGGCAAATACTCAAAGCACAGAATTCTTGTTATATATTGAACACTAACGTATTCCTTTCCTCGCCAGATGAATTTTTCTTTTATTTGAGAACAGTAACCAACAAACCGAACGATATTTCTATGCTGGACACTCATTAGGTGTTTAAGTTCATTCTTGAATTGATCCTCGTTAAGCACGGCCAAGCCATCAATCTTCTTGAATGCAAGTTCCTCCTCGTTGTAAACTCCCTATTATATTTGGCTTATGTAATTAATACATCATACAAAGTTACTTCCCGCTATTACTGGTGCTAGCTACTAGTATCACTTGAGAAAACAGTCCAAAGCATAAGGGATATACCTTGTAAACCTTTCCATACGCACCACTCCCAACTTTTTTTGATTCCGAAAATCCATCGGTACAGGCTTCTATGGCAGCTAGACTTATATCCACTGGTGTAGTACTTGAATTATAGCTTTGCAAGTCATGCAAGAGAAATTGAAGTTCTAATAATTAATGGTAATTAAGACGGGGAATAGACCTGGCCAATTAATTCAATGATCAAAACTGAGAGTACAAATTGTATTGTGCTTTTCTATTGATTTTAGAGGAGATCTAGCACATTGATTCATTTTTGTCCTTAAGAACTAGTGAGTAAAGACGTACTCCCTCTGTTCCCTCTATTTTAAAGTAAATAAGTCGTTTTATGTCCACCAATTGCTTCACTTATCATTTCATTTGTATAACAAAGTATAATAACATTAATTTTGCATCACAAAAAAAATAAAATAATAATAATAATAATAGTTGGTTAAAGACTTATCCTTATGAAACAAGATATGCCTTATATTTTTTATATGGACTAAAGACTTATATATTCAAAAGCTATTAAAAATAGTATGTCCTAAAATGGTAGGTCAATTATTTTGTGTCAGAGGATCATGATATAAAATGTAAAAATATAATAGTAGATTTATTGTCATAAAACTAAACAGCCTTATCTTTTTTTTATTGTTTATGCTTATACTTATCAGCCAAAATTTGAATTTTCATCTTGAAATTTGGAGCTGATTTTGGGGTTTTTTTTGTTGAAGTTTATTTTTCAGCCTTTATTTTTAAATCGTAAAGAATACTTGTATAAATGTTTTATTCACAAATATTATTATTTTAGTTTCCAGATATGTACAAAATTTTATTGTTTTTATTTTTATTATTTTAGTAGATTTATTTTTATTATTTTCGTTTGCAGATATGTTGTTGGGCTCATTTCCCGAACAAGCGAAACGATGGGGCCTTATTTTAACAGTTTTAGAAATATATAGTTTCAAAACTAATGGTAAAATAAGTGCATCGGTTATTTGCGTTCACGTATAAATTGTTTAACAAATGCTTCTCATTGTCAAAGATCATAGAACTCAATTCGTTAAACAGTAGATGTCGAGGGTCAGACGTCAAGAAGTTTGAATGTGTCGAGGTACTCTAAATGAGTAGGTAGTGATTTATTTAGGTAGTATACTGAATAGTAAAGCGCTTACATTTTAGTACAAATTTTAATTATTATATATAAGTACTATTTTGGGTGAGAGAAGTACGTTTTTAGGAAAATTAAATTAAAGACCGATTTTTGCATGGTTTGTTCAATCGTGAGAGAGCTTTTAAACTTGAAATTGATACATGGGTGCATACCTTGAGTTGAAGGATTCCCCCGAAGGCGTCATTTCACTGCTTATCGTCACACCGTTGGCTACGCTGCTTTGTTACGTTGATTAACAGATGTTCAAGATATTCTAGTTAACTTTAATGGAATCATCCTTGCTCAAAAAAATGTTTCTCAGAAAAAAAAAGAGTACTATTTTTTATGTAATCATCATCAATATCTATGATATATACCTGGATGATCCATCGAAAGGCAGCATGGTCGTCGTCGTCGTCGTCACCGCAACAGCCACGCAGCTGTTGGTGTACATGGTCCGCCTCACCTTGGCGTAGTCCATCCCGTCTCCCACAACCACGCTTTGGAGGTTCTGCACAGCAACAGCAACCACATGATCCCGATTGGGGATCGCCTCGTGCACCGAGTGCCAGTTCCCCTTGAGCTCCTCGCCGGTGAACACGTGCGCCTTGAGCAAGAGCAGCTTCCGCAGCTGCGCGTACGGTATCTTCTCCCGGAGGAGCGCCACGACGTAGTCCGGCAGCGGGCGCCGTCGGGGCTTGGCCGTCGTGTCGGCAGCGGCGGCCAATCCCAGCACGGCCTCCGTATGCACGAACAGGTGGTCGTGCGCCAGCGCCAGGACGAAGCCCAGCCACCTGGCGTCGCCGCGGACGGCGGCGGCGGTCGGCATCGGCAGGTCCAGCAGCAGGCGCACCACCTCGGCCATGCCACGCTCCAACGAAGAAAGCGGCTCGTCGTCGTCGTCATCCGACACGGCGTTGATGCCGTCGCAGAAGGAGCCCGACGTGGTGGTCGTCACCAGGCCTCTCGCCTTGGTGCTGCGGATTCTCTCGAGGGCTTGCTTGAGCTGGGTGATGGCTTCGGTGGTCAGATAGTGGTGGCCGTCGCTGCTGGCCAGCGTCAGGACGTAGATACCATCATCTCTTTTCCGTACCTTGCAGAATGTCGCCATTGTTGTTGTCTCGAGCGGAATAACTGGGTGGTCGGGAATAGGAACTTAGCTAGGCGTTGCACATTGCTCATTATTCGAGGAACCGGGGAGATCATAAGACT
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| CDS seq | ATGGCGACATTCTGCAAGGTACGGAAAAGAGATGATGGTATCTACGTCCTGACGCTGGCCAGCAGCGACGGCCACCACTATCTGACCACCGAAGCCATCACCCAGCTCAAGCAAGCCCTCGAGAGAATCCGCAGCACCAAGGCGAGAGGCCTGGTGACGACCACCACGTCGGGCTCCTTCTGCGACGGCATCAACGCCGTGTCGGATGACGACGACGACGAGCCGCTTTCTTCGTTGGAGCGTGGCATGGCCGAGGTGGTGCGCCTGCTGCTGGACCTGCCGATGCCGACCGCCGCCGCCGTCCGCGGCGACGCCAGGTGGCTGGGCTTCGTCCTGGCGCTGGCGCACGACCACCTGTTCGTGCATACGGAGGCCGTGCTGGGATTGGCCGCCGCTGCCGACACGACGGCCAAGCCCCGACGGCGCCCGCTGCCGGACTACGTCGTGGCGCTCCTCCGGGAGAAGATACCGTACGCGCAGCTGCGGAAGCTGCTCTTGCTCAAGGCGCACGTGTTCACCGGCGAGGAGCTCAAGGGGAACTGGCACTCGGTGCACGAGGCGATCCCCAATCGGGATCATGTGGTTGCTGTTGCTGTGCAGAACCTCCAAAGCGTGGTTGTGGGAGACGGGATGGACTACGCCAAGGTGAGGCGGACCATGTACACCAACAGCTGCGTGGCTGTTGCGGTGACGACGACGACGACGACCATGCTGCCTTTCGATGGATCATCCAGCGTAGCCAACGGTGTGACGATAAGCAGTGAAATGACGCCTTCGGGGGAATCCTTCAACTCAAGCTATAATTCAAGTACTACACCAGTGGATATAAGTCTAGCTGCCATAGAAGCCTGTACCGATGGATTTTCGGAATCAAAAAAAGTTGGGAGTGGTGCGTATGGAAAGGTTTACAAGGGAGTTTACAACGAGGAGGAACTTGCATTCAAGAAGATTGATGGCTTGGCCGTGCTTAACGAGGATCAATTCAAGAATGAACTTAAACACCTAATGAGTGTCCAGCATAGAAATATCGTTCGGTTTGTTGGTTACTGTTCTCAAATAAAAGAAAAATTCATCTGGCGAGGAAAGGAATACGTTAGTGTTCAATATATAACAAGAATTCTGTGCTTTGAGTATTTGCCAGGTGGAAGCCTTGACAAGCATCTGGATAAAGAATCTGAATCTGATGGATTTGACTGGCGCACACGATACAATATAATCAAGGTGATTTCCCAAGGATTAAATTACCTCCATGAATTGGAAAAACCTATTTTCCACTTAGACCTGAAACCTGCCAATGTATTGCTTGATGAGAACATGGAGCCAAAAATTGCAGACTTTGGGATATCAAAGCATTTCACTGGAACTAAAACTCACATAACAATATCAAAACCTACAGGCACACCTCGTTACATGCCGCCTGAGTATTTGAATAAACTCGTGATCTCAAATAAGTATGATGTATTCAGTTTTGGAGTTATGGTCATGGAAATCATTGCTGGGCCTACTGGTTATGACAACTTCAGTGAAGCGAATGATCAAGACAGTTTTAAATATATTGATCGTGTGTATAAGCAATGGGAAAAGAGGATAACAGCAAAGTCGCACGATCCATCTGCAGAAATAAATCAAGTGAAAAGATGCATCAATATTGCGGTGAAGTGTTTAAATCAGAACAGAGATGATAGGCCCGAAATAAAGGCTATCGTGGGCGAACTAAATTAA
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| Protein seq | MATFCKVRKRDDGIYVLTLASSDGHHYLTTEAITQLKQALERIRSTKARGLVTTTTSGSFCDGINAVSDDDDDEPLSSLERGMAEVVRLLLDLPMPTAAAVRGDARWLGFVLALAHDHLFVHTEAVLGLAAAADTTAKPRRRPLPDYVVALLREKIPYAQLRKLLLLKAHVFTGEELKGNWHSVHEAIPNRDHVVAVAVQNLQSVVVGDGMDYAKVRRTMYTNSCVAVAVTTTTTTMLPFDGSSSVANGVTISSEMTPSGESFNSSYNSSTTPVDISLAAIEACTDGFSESKKVGSGAYGKVYKGVYNEEELAFKKIDGLAVLNEDQFKNELKHLMSVQHRNIVRFVGYCSQIKEKFIWRGKEYVSVQYITRILCFEYLPGGSLDKHLDKESESDGFDWRTRYNIIKVISQGLNYLHELEKPIFHLDLKPANVLLDENMEPKIADFGISKHFTGTKTHITISKPTGTPRYMPPEYLNKLVISNKYDVFSFGVMVMEIIAGPTGYDNFSEANDQDSFKYIDRVYKQWEKRITAKSHDPSAEINQVKRCINIAVKCLNQNRDDRPEIKAIVGELN |
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| Function | Putative cysteine-rich receptor-like protein kinase 16 [UniProtKB/Swiss-Prot:O65476] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os11g0274700 | Os11t0274700-01 | Chr11 | 9724410 | 9728188 | - | irgsp1_rep | ||
| CDS seq | ATGGCGACATTCTGCAAGGTACGGAAAAGAGATGATGGTATCTACGTCCTGACGCTGGCCAGCAGCGACGGCCACCACTATCTGACCACCGAAGCCATCACCCAGCTCAAGCAAGCCCTCGAGAGAATCCGCAGCACCAAGGCGAGAGGCCTGGTGACGACCACCACGTCGGGCTCCTTCTGCGACGGCATCAACGCCGTGTCGGATGACGACGACGACGAGCCGCTTTCTTCGTTGGAGCGTGGCATGGCCGAGGTGGTGCGCCTGCTGCTGGACCTGCCGATGCCGACCGCCGCCGCCGTCCGCGGCGACGCCAGGTGGCTGGGCTTCGTCCTGGCGCTGGCGCACGACCACCTGTTCGTGCATACGGAGGCCGTGCTGGGATTGGCCGCCGCTGCCGACACGACGGCCAAGCCCCGACGGCGCCCGCTGCCGGACTACGTCGTGGCGCTCCTCCGGGAGAAGATACCGTACGCGCAGCTGCGGAAGCTGCTCTTGCTCAAGGCGCACGTGTTCACCGGCGAGGAGCTCAAGGGGAACTGGCACTCGGTGCACGAGGCGATCCCCAATCGGGATCATGTGGTTGCTGTTGCTGTGCAGAACCTCCAAAGCGTGGTTGTGGGAGACGGGATGGACTACGCCAAGGTGAGGCGGACCATGTACACCAACAGCTGCGTGGCTGTTGCGGTGACGACGACGACGACGACCATGCTGCCTTTCGATGGATCATCCAGCGTAGCCAACGGTGTGACGATAAGCAGTGAAATGACGCCTTCGGGGGAATCCTTCAACTCAAGCTATAATTCAAGTACTACACCAGTGGATATAAGTCTAGCTGCCATAGAAGCCTGTACCGATGGATTTTCGGAATCAAAAAAAGTTGGGAGTGGTGCGTATGGAAAGGTTTACAAGGGAGTTTACAACGAGGAGGAACTTGCATTCAAGAAGATTGATGGCTTGGCCGTGCTTAACGAGGATCAATTCAAGAATGAACTTAAACACCTAATGAGTGTCCAGCATAGAAATATCGTTCGGTTTGTTGGTTACTGTTCTCAAATAAAAGAAAAATTCATCTGGCGAGGAAAGGAATACGTTAGTGTTCAATATATAACAAGAATTCTGTGCTTTGAGTATTTGCCAGGTGGAAGCCTTGACAAGCATCTGGATAAAGAATCTGAATCTGATGGATTTGACTGGCGCACACGATACAATATAATCAAGGTGATTTCCCAAGGATTAAATTACCTCCATGAATTGGAAAAACCTATTTTCCACTTAGACCTGAAACCTGCCAATGTATTGCTTGATGAGAACATGGAGCCAAAAATTGCAGACTTTGGGATATCAAAGCATTTCACTGGAACTAAAACTCACATAACAATATCAAAACCTACAGGCACACCTCGTTACATGCCGCCTGAGTATTTGAATAAACTCGTGATCTCAAATAAGTATGATGTATTCAGTTTTGGAGTTATGGTCATGGAAATCATTGCTGGGCCTACTGGTTATGACAACTTCAGTGAAGCGAATGATCAAGACAGTTTTAAATATATTGATCGTGTGTATAAGCAATGGGAAAAGAGGATAACAGCAAAGTCGCACGATCCATCTGCAGAAATAAATCAAGTGAAAAGATGCATCAATATTGCGGTGAAGTGTTTAAATCAGAACAGAGATGATAGGCCCGAAATAAAGGCTATCGTGGGCGAACTAAATTAA
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| Protein seq | MATFCKVRKRDDGIYVLTLASSDGHHYLTTEAITQLKQALERIRSTKARGLVTTTTSGSFCDGINAVSDDDDDEPLSSLERGMAEVVRLLLDLPMPTAAAVRGDARWLGFVLALAHDHLFVHTEAVLGLAAAADTTAKPRRRPLPDYVVALLREKIPYAQLRKLLLLKAHVFTGEELKGNWHSVHEAIPNRDHVVAVAVQNLQSVVVGDGMDYAKVRRTMYTNSCVAVAVTTTTTTMLPFDGSSSVANGVTISSEMTPSGESFNSSYNSSTTPVDISLAAIEACTDGFSESKKVGSGAYGKVYKGVYNEEELAFKKIDGLAVLNEDQFKNELKHLMSVQHRNIVRFVGYCSQIKEKFIWRGKEYVSVQYITRILCFEYLPGGSLDKHLDKESESDGFDWRTRYNIIKVISQGLNYLHELEKPIFHLDLKPANVLLDENMEPKIADFGISKHFTGTKTHITISKPTGTPRYMPPEYLNKLVISNKYDVFSFGVMVMEIIAGPTGYDNFSEANDQDSFKYIDRVYKQWEKRITAKSHDPSAEINQVKRCINIAVKCLNQNRDDRPEIKAIVGELN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0274700 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g17440 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0010380 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0010280 | RBH | 0.000000 | 2.182935 | 0.189455 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0010280 | RBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0010100 | RBH | 0.0 | 0.017451 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0010160 | RBH | 0.000000 | 0.930507 | 0.736535 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0149000 | RBH | 0.1274885 | 10.006138 | 0.003286 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0010230 | RBH | 0.0 | 0.141697 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0150600 | RBH | 0.0783125 | 2.660601 | 0.0054745 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0010320 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0010480 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0010140 | RBH | 0.0 | 10.040657 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0010020 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0010210 | RBH | 0.0 | 1.324512 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G010290 | RBH | 0.0 | 0.658168 | 0.403298 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0010060 | RBH | 0.0 | 2.357288 | 0.000000 |
