Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os11g0133500 | OGI:11005370 | 15/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr11:1545969-1548581 | ||||||||
| Gene Symbol | RLCK310, OsRLCK310, LecRK, OsLecRK, SDK2 | ||||||||||
| DNA seq | AGAATACAAATAGCCACTATCAATCTCTAATACTTCTTGCAAGGGATCTAAGATTAAAACTACTTATCACATAACAATTAATTAACACATACATATTAACAATGCACTAGATGACACATAGCTTTAACCTTCAACCGAGATGAGTGCTTGCACAACTGAGTTCATGTTTGGCCGCTTGCTCCTATCTTCCTCCAAGCATGAAACGGCAATCTCAAGCATCAGCTTCACTTGTACATGGTTGAAATCGCCATTCAATCGATAGTCCACAAGATCCTCAATAGATCTTTCTTCATTGGATCCCATCATCTGACGTGTCGCCCTGACAACCATCCTAATATTCATCTCACATACCTTGATCCCATGGATCACCCATTCCGAAATCCTAATCCCCTTCACTAGCTCAAGGAGTATCACTCCATAACTATACACATCAACCTTCTCTGTAACTGGTAAGTTAGTAACCCACTCTGGAGCCATGTACCCTCTTGTCCCTCTAATCCTTGTTAAAATTGCATGTGAACCATCTCTGTTTAACAACTTAGACAACCCAAAATCCGTAATCTTAGGCTCCAAATCCTTATCCAACAAAATGTTCTCAGGCTTCATGTCACAATGAACAATCCATTCTGAGCACTCACTGTGAAGGTAAGCCAACCCTTTAGCCACACCCAGAGCAATCTTGAACCTTTGATTCCAATCAAGCACATCATCATCAAATCCATGATCAAACAATCTTTGTGCAAGTGATCCATTCTCTATGTATTCAGAGACCAGAATCCTGTGCTTGGCTTGAGAGCAGCAACCCCACATTCTGACAAGGTTCATGTGATAGATCCTTCCAATCACACTCAGCTCTGCTTGGAACTCCTCCTCACTCTGCCAGCTCACGTTCTTGAGCACCTTCACGGCCACCACCCTCTCGTCGTCGAGCACGCCCTTGTACACCACGCCGGAGCCGCCGCGGCCGATCACGCCGGTGAAGTTCGCCGTGGCTTTCTTGATGTCAACGTAGGTGAACCTCTGGAAATGGGTCGTGATCAGCTTGTAGCCTTCTTGATCAATGGCGTACACCCGTGAATGCCGGAACAATCCTTTGCTTGAGAAGAGCCAGCAGCCGAAACCGATGACGATGGCCTCGACGACGAGCAACGCTGACAAGAATCCGTACAGGTATGGCCACACCGGCTTACCGGCATCGTGAGATGACAATGAAGAAGAGACGTTGAGGAGAACCTTTCTGTTGCTGTCGCCGGTGGCGGCGGCGGCGCAGCCGGTGATGTCTTCTTGGATGGCGAGGCCGCCGCCGCCGCCGTCGCCGCCGCGCTGCCATTGGTGGACATGAAACTCCGGCACGTCGAAGTCGGCGGGGACCTTGATGTACACCGTGCCCGGCAAGCCGGGGAAGGTCTTGCCGTTGAAGAGGACGCTCTTGAGGTAGCACTCCATGTGCTCCTTGTACTGGAACACCACGCACGCGCAGTTGTCGAGGCACTTGTTGGCGCAGTCGCCGAGCGGCATGACCTCGCCGTCGTTGAGGTCGTAGCCCCAGAAGTCGCTGTGCGGCAGCGCCACCAGCTTCGCCGGCCGGCCGCACTCGATCCGGAACGTCGGCCTGCACCCCCTGCTCCAGTCGCTCGCGTCGACGCGCTCGTGCCCCGGCGCGCAGACGCACACCGGCGCCGGCGAGTAGAGGCACACGGCGTTGGCGCCGCACACGCCGTGGATGTTGCACGGGTTGCCGAACGCCATCCACGACACCGACCACGCTCCCGTCGCGCCGTCCAGGCTGTACGCCCTGAGGTTGCCGTCCGTGTCCAGCGTCAGCCGCCTCCTGACGCCGGCGGCGCCGAGGTCGGCGGCCTCGAAGGTGGTGCCGTCGCTGGAGAGGAACTGCCCGAGCGCGTCCATGGCGGCCTCGCGGGAGAAGTTGTAGATCTTGCGGTTGTTCTGCCAGTAGCTGAAGTAGGGGTTGGGCCAGTAGATGCTGGAGAAGTTGCCGTTGTCGTAGAAGAGGGAGAGCATGGCGTAGTCGCTGAACCCGAGGCTGTAGTAGCCGGCGGAGAGCAGCCGGTCGCGCGACACCAGCCGCGTCGCCGCCGTCAGCCGCTGCGTCGGGAGCAGCGTGTCGGTGGGGAAGTCGAAGCTCTGCCACAGCGTCTTGCCGCCGGCGTCCTCGACCACCAGGTTGCCGGAGTCGTGGAGCCGGACGCGGGCGCCGCCGCTGCCACCGGCGGCGGGGGTGGAGGAGTTCCAGACCACCTCGCCGCCGTAGTCGGTGAGGACGAGCGCGCCGTGGCGCGCGTCGAGCGTGACGCGCGCGCCCTTGCTGTGCACGGGGCGCGCCCGCGCCGCGGTCCAGACAACGGCGCGGTCGGCGGCGCGCGCGAACCAGACGGAGAAGGTGAAGACGGTGGGCGACGCGTCGTAGAAGCCGGCGGCGAACGTGCCGTCCGGCGAGCGGAGGACGTCGGTGGCGTGGTCCTCGACGGCGATCGAGGCGCCCCGGGCGAGCCACTCACGCGCCGCGTCGACGCGCCGTGGACATGGACGCGACGACGAGCTTAGCGTGATGATCACAAGCAATGCGAAGGTTGCAAGGCGAGAGCTCATCAT
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| CDS seq | ATGATGAGCTCTCGCCTTGCAACCTTCGCATTGCTTGTGATCATCACGCTAAGCTCGTCGTCGCGTCCATGTCCACGGCGCGTCGACGCGGCGCGTGAGTGGCTCGCCCGGGGCGCCTCGATCGCCGTCGAGGACCACGCCACCGACGTCCTCCGCTCGCCGGACGGCACGTTCGCCGCCGGCTTCTACGACGCGTCGCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTTGTCTGGACCGCGGCGCGGGCGCGCCCCGTGCACAGCAAGGGCGCGCGCGTCACGCTCGACGCGCGCCACGGCGCGCTCGTCCTCACCGACTACGGCGGCGAGGTGGTCTGGAACTCCTCCACCCCCGCCGCCGGTGGCAGCGGCGGCGCCCGCGTCCGGCTCCACGACTCCGGCAACCTGGTGGTCGAGGACGCCGGCGGCAAGACGCTGTGGCAGAGCTTCGACTTCCCCACCGACACGCTGCTCCCGACGCAGCGGCTGACGGCGGCGACGCGGCTGGTGTCGCGCGACCGGCTGCTCTCCGCCGGCTACTACAGCCTCGGGTTCAGCGACTACGCCATGCTCTCCCTCTTCTACGACAACGGCAACTTCTCCAGCATCTACTGGCCCAACCCCTACTTCAGCTACTGGCAGAACAACCGCAAGATCTACAACTTCTCCCGCGAGGCCGCCATGGACGCGCTCGGGCAGTTCCTCTCCAGCGACGGCACCACCTTCGAGGCCGCCGACCTCGGCGCCGCCGGCGTCAGGAGGCGGCTGACGCTGGACACGGACGGCAACCTCAGGGCGTACAGCCTGGACGGCGCGACGGGAGCGTGGTCGGTGTCGTGGATGGCGTTCGGCAACCCGTGCAACATCCACGGCGTGTGCGGCGCCAACGCCGTGTGCCTCTACTCGCCGGCGCCGGTGTGCGTCTGCGCGCCGGGGCACGAGCGCGTCGACGCGAGCGACTGGAGCAGGGGGTGCAGGCCGACGTTCCGGATCGAGTGCGGCCGGCCGGCGAAGCTGGTGGCGCTGCCGCACAGCGACTTCTGGGGCTACGACCTCAACGACGGCGAGGTCATGCCGCTCGGCGACTGCGCCAACAAGTGCCTCGACAACTGCGCGTGCGTGGTGTTCCAGTACAAGGAGCACATGGAGTGCTACCTCAAGAGCGTCCTCTTCAACGGCAAGACCTTCCCCGGCTTGCCGGGCACGGTGTACATCAAGGTCCCCGCCGACTTCGACGTGCCGGAGTTTCATGTCCACCAATGGCAGCGCGGCGGCGACGGCGGCGGCGGCGGCCTCGCCATCCAAGAAGACATCACCGGCTGCGCCGCCGCCGCCACCGGCGACAGCAACAGAAAGGTTCTCCTCAACGTCTCTTCTTCATTGTCATCTCACGATGCCGGTAAGCCGGTGTGGCCATACCTGTACGGATTCTTGTCAGCGTTGCTCGTCGTCGAGGCCATCGTCATCGGTTTCGGCTGCTGGCTCTTCTCAAGCAAAGGATTGTTCCGGCATTCACGGGTGTACGCCATTGATCAAGAAGGCTACAAGCTGATCACGACCCATTTCCAGAGGTTCACCTACGTTGACATCAAGAAAGCCACGGCGAACTTCACCGGCGTGATCGGCCGCGGCGGCTCCGGCGTGGTGTACAAGGGCGTGCTCGACGACGAGAGGGTGGTGGCCGTGAAGGTGCTCAAGAACGTGAGCTGGCAGAGTGAGGAGGAGTTCCAAGCAGAGCTGAGTGTGATTGGAAGGATCTATCACATGAACCTTGTCAGAATGTGGGGTTGCTGCTCTCAAGCCAAGCACAGGATTCTGGTCTCTGAATACATAGAGAATGGATCACTTGCACAAAGATTGTTTGATCATGGATTTGATGATGATGTGCTTGATTGGAATCAAAGGTTCAAGATTGCTCTGGGTGTGGCTAAAGGGTTGGCTTACCTTCACAGTGAGTGCTCAGAATGGATTGTTCATTGTGACATGAAGCCTGAGAACATTTTGTTGGATAAGGATTTGGAGCCTAAGATTACGGATTTTGGGTTGTCTAAGTTGTTAAACAGAGATGGTTCACATGCAATTTTAACAAGGATTAGAGGGACAAGAGGGTACATGGCTCCAGAGTGGGTTACTAACTTACCAGTTACAGAGAAGGTTGATGTGTATAGTTATGGAGTGATACTCCTTGAGCTAGTGAAGGGGATTAGGATTTCGGAATGGGTGATCCATGGGATCAAGGTATGTGAGATGAATATTAGGATGGTTGTCAGGGCGACACGTCAGATGATGGGATCCAATGAAGAAAGATCTATTGAGGATCTTGTGGACTATCGATTGAATGGCGATTTCAACCATGTACAAGTGAAGCTGATGCTTGAGATTGCCGTTTCATGCTTGGAGGAAGATAGGAGCAAGCGGCCAAACATGAACTCAGTTGTGCAAGCACTCATCTCGGTTGAAGGTTAA
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| Protein seq | MMSSRLATFALLVIITLSSSSRPCPRRVDAAREWLARGASIAVEDHATDVLRSPDGTFAAGFYDASPTVFTFSVWFARAADRAVVWTAARARPVHSKGARVTLDARHGALVLTDYGGEVVWNSSTPAAGGSGGARVRLHDSGNLVVEDAGGKTLWQSFDFPTDTLLPTQRLTAATRLVSRDRLLSAGYYSLGFSDYAMLSLFYDNGNFSSIYWPNPYFSYWQNNRKIYNFSREAAMDALGQFLSSDGTTFEAADLGAAGVRRRLTLDTDGNLRAYSLDGATGAWSVSWMAFGNPCNIHGVCGANAVCLYSPAPVCVCAPGHERVDASDWSRGCRPTFRIECGRPAKLVALPHSDFWGYDLNDGEVMPLGDCANKCLDNCACVVFQYKEHMECYLKSVLFNGKTFPGLPGTVYIKVPADFDVPEFHVHQWQRGGDGGGGGLAIQEDITGCAAAATGDSNRKVLLNVSSSLSSHDAGKPVWPYLYGFLSALLVVEAIVIGFGCWLFSSKGLFRHSRVYAIDQEGYKLITTHFQRFTYVDIKKATANFTGVIGRGGSGVVYKGVLDDERVVAVKVLKNVSWQSEEEFQAELSVIGRIYHMNLVRMWGCCSQAKHRILVSEYIENGSLAQRLFDHGFDDDVLDWNQRFKIALGVAKGLAYLHSECSEWIVHCDMKPENILLDKDLEPKITDFGLSKLLNRDGSHAILTRIRGTRGYMAPEWVTNLPVTEKVDVYSYGVILLELVKGIRISEWVIHGIKVCEMNIRMVVRATRQMMGSNEERSIEDLVDYRLNGDFNHVQVKLMLEIAVSCLEEDRSKRPNMNSVVQALISVEG |
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| Function | Putative receptor protein kinase ZmPK1 [UniProtKB/Swiss-Prot:P17801] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os11g0133500 | Os11t0133500-00 | Chr11 | 1545969 | 1548581 | - | irgsp1_rep | ||
| CDS seq | ATGATGAGCTCTCGCCTTGCAACCTTCGCATTGCTTGTGATCATCACGCTAAGCTCGTCGTCGCGTCCATGTCCACGGCGCGTCGACGCGGCGCGTGAGTGGCTCGCCCGGGGCGCCTCGATCGCCGTCGAGGACCACGCCACCGACGTCCTCCGCTCGCCGGACGGCACGTTCGCCGCCGGCTTCTACGACGCGTCGCCCACCGTCTTCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTTGTCTGGACCGCGGCGCGGGCGCGCCCCGTGCACAGCAAGGGCGCGCGCGTCACGCTCGACGCGCGCCACGGCGCGCTCGTCCTCACCGACTACGGCGGCGAGGTGGTCTGGAACTCCTCCACCCCCGCCGCCGGTGGCAGCGGCGGCGCCCGCGTCCGGCTCCACGACTCCGGCAACCTGGTGGTCGAGGACGCCGGCGGCAAGACGCTGTGGCAGAGCTTCGACTTCCCCACCGACACGCTGCTCCCGACGCAGCGGCTGACGGCGGCGACGCGGCTGGTGTCGCGCGACCGGCTGCTCTCCGCCGGCTACTACAGCCTCGGGTTCAGCGACTACGCCATGCTCTCCCTCTTCTACGACAACGGCAACTTCTCCAGCATCTACTGGCCCAACCCCTACTTCAGCTACTGGCAGAACAACCGCAAGATCTACAACTTCTCCCGCGAGGCCGCCATGGACGCGCTCGGGCAGTTCCTCTCCAGCGACGGCACCACCTTCGAGGCCGCCGACCTCGGCGCCGCCGGCGTCAGGAGGCGGCTGACGCTGGACACGGACGGCAACCTCAGGGCGTACAGCCTGGACGGCGCGACGGGAGCGTGGTCGGTGTCGTGGATGGCGTTCGGCAACCCGTGCAACATCCACGGCGTGTGCGGCGCCAACGCCGTGTGCCTCTACTCGCCGGCGCCGGTGTGCGTCTGCGCGCCGGGGCACGAGCGCGTCGACGCGAGCGACTGGAGCAGGGGGTGCAGGCCGACGTTCCGGATCGAGTGCGGCCGGCCGGCGAAGCTGGTGGCGCTGCCGCACAGCGACTTCTGGGGCTACGACCTCAACGACGGCGAGGTCATGCCGCTCGGCGACTGCGCCAACAAGTGCCTCGACAACTGCGCGTGCGTGGTGTTCCAGTACAAGGAGCACATGGAGTGCTACCTCAAGAGCGTCCTCTTCAACGGCAAGACCTTCCCCGGCTTGCCGGGCACGGTGTACATCAAGGTCCCCGCCGACTTCGACGTGCCGGAGTTTCATGTCCACCAATGGCAGCGCGGCGGCGACGGCGGCGGCGGCGGCCTCGCCATCCAAGAAGACATCACCGGCTGCGCCGCCGCCGCCACCGGCGACAGCAACAGAAAGGTTCTCCTCAACGTCTCTTCTTCATTGTCATCTCACGATGCCGGTAAGCCGGTGTGGCCATACCTGTACGGATTCTTGTCAGCGTTGCTCGTCGTCGAGGCCATCGTCATCGGTTTCGGCTGCTGGCTCTTCTCAAGCAAAGGATTGTTCCGGCATTCACGGGTGTACGCCATTGATCAAGAAGGCTACAAGCTGATCACGACCCATTTCCAGAGGTTCACCTACGTTGACATCAAGAAAGCCACGGCGAACTTCACCGGCGTGATCGGCCGCGGCGGCTCCGGCGTGGTGTACAAGGGCGTGCTCGACGACGAGAGGGTGGTGGCCGTGAAGGTGCTCAAGAACGTGAGCTGGCAGAGTGAGGAGGAGTTCCAAGCAGAGCTGAGTGTGATTGGAAGGATCTATCACATGAACCTTGTCAGAATGTGGGGTTGCTGCTCTCAAGCCAAGCACAGGATTCTGGTCTCTGAATACATAGAGAATGGATCACTTGCACAAAGATTGTTTGATCATGGATTTGATGATGATGTGCTTGATTGGAATCAAAGGTTCAAGATTGCTCTGGGTGTGGCTAAAGGGTTGGCTTACCTTCACAGTGAGTGCTCAGAATGGATTGTTCATTGTGACATGAAGCCTGAGAACATTTTGTTGGATAAGGATTTGGAGCCTAAGATTACGGATTTTGGGTTGTCTAAGTTGTTAAACAGAGATGGTTCACATGCAATTTTAACAAGGATTAGAGGGACAAGAGGGTACATGGCTCCAGAGTGGGTTACTAACTTACCAGTTACAGAGAAGGTTGATGTGTATAGTTATGGAGTGATACTCCTTGAGCTAGTGAAGGGGATTAGGATTTCGGAATGGGTGATCCATGGGATCAAGGTATGTGAGATGAATATTAGGATGGTTGTCAGGGCGACACGTCAGATGATGGGATCCAATGAAGAAAGATCTATTGAGGATCTTGTGGACTATCGATTGAATGGCGATTTCAACCATGTACAAGTGAAGCTGATGCTTGAGATTGCCGTTTCATGCTTGGAGGAAGATAGGAGCAAGCGGCCAAACATGAACTCAGTTGTGCAAGCACTCATCTCGGTTGAAGGTTAA
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| Protein seq | MMSSRLATFALLVIITLSSSSRPCPRRVDAAREWLARGASIAVEDHATDVLRSPDGTFAAGFYDASPTVFTFSVWFARAADRAVVWTAARARPVHSKGARVTLDARHGALVLTDYGGEVVWNSSTPAAGGSGGARVRLHDSGNLVVEDAGGKTLWQSFDFPTDTLLPTQRLTAATRLVSRDRLLSAGYYSLGFSDYAMLSLFYDNGNFSSIYWPNPYFSYWQNNRKIYNFSREAAMDALGQFLSSDGTTFEAADLGAAGVRRRLTLDTDGNLRAYSLDGATGAWSVSWMAFGNPCNIHGVCGANAVCLYSPAPVCVCAPGHERVDASDWSRGCRPTFRIECGRPAKLVALPHSDFWGYDLNDGEVMPLGDCANKCLDNCACVVFQYKEHMECYLKSVLFNGKTFPGLPGTVYIKVPADFDVPEFHVHQWQRGGDGGGGGLAIQEDITGCAAAATGDSNRKVLLNVSSSLSSHDAGKPVWPYLYGFLSALLVVEAIVIGFGCWLFSSKGLFRHSRVYAIDQEGYKLITTHFQRFTYVDIKKATANFTGVIGRGGSGVVYKGVLDDERVVAVKVLKNVSWQSEEEFQAELSVIGRIYHMNLVRMWGCCSQAKHRILVSEYIENGSLAQRLFDHGFDDDVLDWNQRFKIALGVAKGLAYLHSECSEWIVHCDMKPENILLDKDLEPKITDFGLSKLLNRDGSHAILTRIRGTRGYMAPEWVTNLPVTEKVDVYSYGVILLELVKGIRISEWVIHGIKVCEMNIRMVVRATRQMMGSNEERSIEDLVDYRLNGDFNHVQVKLMLEIAVSCLEEDRSKRPNMNSVVQALISVEG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0133500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g03880 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0130800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0002220 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0002250 | RBH | 0.0 | 0.000000 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0002240 | RBH | 0.0 | 0.738476 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0002180 | SBH | 0.0 | 0.040205 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0002180 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0031400 | RBH | 0.006236 | 0.7993985 | 0.0585065 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0002210 | RBH | 0.0 | 0.202834 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0030200 | RBH | 0.019728 | 2.080436 | 0.0044825 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0002110 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0002260 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0002250 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0002190 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0002260 | RBH | 0.0 | 0.360111 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G002190 | RBH | 0.0 | 0.0 | 0.117536 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0002170 | RBH | 0.0 | 0.0 | 0.000000 |
