Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0515400 | OGI:10060980 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:19864246-19868374 | ||||||||
| Gene Symbol | GW10, OsGW10 | ||||||||||
| DNA seq | AGGAATCGAGGAATGGATTAATTATTCGAGTGTACTCCGGGGCACGAGGCGCACGCGCAGCGGCTTGGCCATGACGGTGTTGAACTCCCGCTTCTCGGCGAAGTCCACCTCGTCGCCGGCCACCTCCTTCCACTCGAACTCCCTCACCATGTTGGCCACGAAGTACTCCAGGTGAAGCATGGCGATGCCGAGCCCGGGACAAATCCGCCGCCCGACGCCGAACGGCATCATGCGGATCCCCTTGCTGCTCGTCACGTCCACCCCCTCGCCGTCGCCGCCGGGGAGGAACCGCTCCGGCATGAACTCCATTGGCTTCTCCCATTCTTTCTCGTCCCTGCCCATCTCAGCCACCATGAAGTTCACTATGGTGCCCTTGGGGATGAGGTACCCGCCGACGTCCATGTCCTCCGCCGCCTTGTGAGGTAGCAGCATGTGCGCCGGTGGGTGCTTCCGGAGGCCTTCGAGCACCACCGCCTTCAGGTACGGCATGTCGTGGACGTCCTCCTCGGAGACCTCGTGCTGGCCGCCGCCGCCGGTCTTGGACTTGATCTCCTCGTAGAGCTTTGATTGGATGGATGGGTTCCTGACCAGCTCGGCCATGATCCATTGCAGCGCGGCGGACGTGCTGTCCGTGCCGGCTACGAGGAACTCGGAGCAGAGCATAACCAGCTCGTCGTCGGTGAGCGCGCGGTTGCCGTCCTCCGGGAGGTTGATGTCGAGCAGGTTGTCGACGTACGAGTGCGTGAACGTGGTCGTCTCCTTCTTCGGCTCGCCGCCGTTTTTCTTGTACTCCCGCCGGGAGTTGATCAACGGCACGAACAACTCCTCCTTCCGCCGCCGGAGGGCGTGAGCCTTCTGAAGACGCCCGCGGAAGAGGTGCCTGGTGATCGCCGGGAAGAAGTTGAAGACGCCCATCTCGCTCGACATGTAGAGCATCGTGTCGCGCTCCGCCGCGCCGATCGCGCGCACCGCGTCCTCGTCGAGCTGTTCGCCGAAGCACATGAGCACCAGGAGGCAGAACATGGCGTACTGGAACGTCTCTACGACGGCGCGTGGCGCCGCCTCCGCCTCGCCGTGCTCCTCCCGCAGCCTGTCGACGAGCAGGCGGCGCACCCGCGCGCGCACCGGCGCGAACAGGTGGGCGCGCGACGGGTGCAGCGTATCGGCGACGAGGTTGCGCCGCAGGAGGCGCCACACGGGCCCGTAGCTCGCGCGCGAGATCATGGTATCGCCCTCGCCGACGAGCCTGGCCGAGGCGGCCTGGCTGGGGCGATCGGCCAGGGAGGCCCCGCTCTCGACGAGCGCCGCGTGCGCGAGGCGGCGGTCGGCGACGAAGACGAGCAGCTGGGAGCCGAAGCGAAGGGAGACGACGGGGCCGTGCCGCGACATCAGGCGCTTGACGACGGGCTCGGCGTCGTACAACGAGTTGGTCAGCCACACCGTGCTCCCGAGCAACGGCACGGCCGGAGGACCCGGCGGGAGGCGGCCGCGTCTCCCGTCGTCGCCGCGGCGGAAGAGGATGAGCCGGAGCAAGGGGATGAGGATGGCGATCGCGGGGACGAACAGCTGCCAGGCGTCCATGGCGCGAGCGATCGAGGTGCTCGACGACGGCCACCTCGTACTGTGCTGGCTACTTCGGGGCGCCTGTTTTATAGGGGTGTTTAACTGTTAGTTTACGCTTGAAAAATCGTCGTATGAATCGTTTTATACTACTTTATTTACTTGATCGTATCACAGTCATGATCTCGATTGACTTGGCGAGGAAGCTTGAAAGGATCAATCAAATACTGATATGATGAAATGAAAATTGGTATAGAATGGTAATACGTGCTTAGCACATCTGGTTTAAAGAGTTCATAAGTATAAAACGTCTGGTAACAGAGTTAAGGAAGGTAAATCTTACTTATACAAGAGTGTAGATCAGTAGATCGAGCTTAAAAAAATGTGCGAACAGATTCAAATAAGTATTTCTGAAGTTGGATACCGATAGTTATAACATATGTGAAAATAATGAAGAAAAAACATAATTGGCTGAAAAGTAGAAGTAGGTGAAGAAACGAACGAAGAATAGTTATAATTGATTGAGATAAAAAGATAGATGAAAAAATAGTTTTATTTTAAAACAGAGGTGAAGCGGTAGGAATAGTTTCACTTCAGGAGGCATGCACTGGTAAGTATACCTGGCCAAATGGGCCGTGCCAAGCCGGGCCGGCCCGAGCACGGCAGTACTGTAGCCGGCCCAGGCCCGGCACGGCACGCCAGCCTGTGGGCCGTGCCGGCACGGCCCGTTATCCCGTGCCGTGTTTGGGCCGATGCCTCAGCCCGTGGGCTGGCACGGCACGGCACGGCACGTTTACTGTAGCGTGCCGGCACGGCACGGCCCAGGCATGGCACGGCCCACCGGCCCATTTATTTTTCCTACGATTTTCTAATTTTTCCCATATATTTCTCATATTTTTTATTTTTTTCCACATTTTATCCTATTTGTACCATATATTTTATGATATATTTCCTAAATTTTCCTCACATTTATCCTATATTTATCATTTTTTCCTTTATATTATGTTTTTTCTGCCTTTTTTCTTTTTTTCCCCTCAAATTTCAATTTTTATGGGCCACATGTACTAGTGGGCCGGCTACCAGCCCACGTGCCACTACAGTAGCCGTGCCGGCCCGGCACGGCCCAGCACCTTCTTGGGCCGTGCTTGGGCCGTGGCCTTGGCACGTGGGCCGGCACGGCACGGCCCGCTACAGGAGCCGTGCCTAACGGGCCGTGCCCTAGTGGGCTGTGCCGTCGGCGTGCCGTGTCGTGCTGGGCCGGGCCGCCCGTTTGGCCTGCTATACTGGTAAGTGGCAACAACTAAGTATATCTTGCTCCATGCTGATAGTAGCAATTTTTTTTAACATGATCATTTTTTATGCCCAGTCAATACGATATGTTGATAACAAAGCTATCAATGGAGAATACGAACGATATGGCATAGTATCTTTTGGTTCTGTATGTGTCCTATTCATTAGGATATTATCTTCGTTTAATATTTGTTGGAAAAAGTACGAATTACACCCCTGGACTATCGAGGTCGACCGAATTACACCCCCGAACTCAAAAACCAGACATTCTACACCCTCAACTATTGAAACCGGGCAAATTACCCCCCTAAGCACTGTTTTAGGTGGTTTTGGGATAGACTTGCTGACGTGGCAGTCCAGTCAGCATTTTATTTTTTTAAAATGGTGGGACCCACATGTCATACACTCTTTCTCTCTTCCTCCATCTCTCTTTCTCTCTCTTCGTCGGCCAGCAGCAGGCAGCGCCGCGCACACCGGCACGCCATGGTGGAGAGGCGAGCGCCGGCGAGGGGATGCGATGGGCAGCGGCGCGCGGGGGCAGGCCGGCGGTCGGCGCGAACGGCGGCGCGCGGCGAGGTGGAGGGGATGGGGGAGAGGTGGGCGCCGGCGTCCATCGCGGAGAGGCGGGCCGTCGTGGCGCCGGCCGGCAGCATCTTGAGGACAACAGCGTGAGGCCGCGGCGGCGGTGGTCCAGGCGGAGCACGAGCGGGGCGGGCAGAGAGGAAGGAGGTGAGGAGGCCAGGGAGCGGGCTGAGGAGGGAGGAGACCGGCGAGGGAGCGGGGAGGCCGGGAGAGTCGTCGGAGTCATCCCCCAGCCGCCACCGTCGTCGTCGTTCGAGCCGCTCCCGCCAGAGTACGATGAGCCCAGCCATACTCGTTGCTGCGACGACCACCTCTGGCCCGACGACGACCGCCGTGCCCCGCTACCCTTCCCCGACACCTGCTCGCTCGGATTTGGCGCGGCGGCGGAGAGAAGCGCCGCCCGCCTCCTCCCTCTCGGCGCGCTCGCCGCATCCCCTCTGCGGGCGCTTGCCGGCATCCCAGCCCGTCTCGACAGCCTCCCCTCCGCTGTCCCCTCCTCCCGCCGCCTCGAGCTCCGGCGGGCGCGGTGGGGAGGGCGAGACGGGCGGCGGGCGCCGAGGACATTGAAGATGACAACAGCGAGCTCGGGCGTGCGCGCCGACCTCCCGACGGCCCGAGAGAGAGGGGTGAGAGGGGGGCACTTCGTCGCCCTCGCCACTTCGCCGCCCTCCGCCGCGACAGGGGGGCACGGCGCCAT
More
|
||||||||||
| CDS seq | ATGGCGCCGTGCCCCCCTGTCGCGGCGGAGGGCGGCGAAGTGGCGAGGGCGACGAAGTGCCCCCCTCTCACCCCTCTCTCTCGGGCCGTCGGGAGGTCGGCGCGCACGCCCGAGCTCGCTGTTGTCATCTTCAATGTCCTCGGCGCCCGCCGCCCGTCTCGCCCTCCCCACCGCGCCCGCCGGAGCTCGAGGCGGCGGGAGGAGGGGACAGCGGAGGGGAGGCTGTCGAGACGGGCTGGGATGCCGGCAAGCGCCCGCAGAGGGGATGCGGCGAGCGCGCCGAGAGGGAGGAGGCGGGCGGCGCTTCTCTCCGCCGCCGCGCCAAATCCGAGCGAGCAGGTGTCGGGGAAGGGTAGCGGGGCACGGCGGTCGTCGTCGGGCCAGAGGTGGTCGTCGCAGCAACGAGTATGGCTGGGCTCATCGTACTCTGGCGGGAGCGGCTCGAACGACGACGACGGTGGCGGCTGGGGGATGACTCCGACGACTCTCCCGGCCTCCCCGCTCCCTCGCCGGTCTCCTCCCTCCTCAGCCCGCTCCCTGGCCTCCTCACCTCCTTCCTCTCTGCCCGCCCCGCTCGTGCTCCGCCTGGACCACCGCCGCCGCGGCCTCACGCTGTTGTCCTCAAGATGCTGCCGGCCGGCGCCACGACGGCCCGCCTCTCCGCGATGGACGCCGGCGCCCACCTCTCCCCCATCCCCTCCACCTCGCCGCGCGCCGCCGTTCGCGCCGACCGCCGGCCTGCCCCCGCGCGCCGCTGCCCATCGCATCCCCTCGCCGGCGCTCGCCTCTCCACCATGGCGTGCCGGTGTGCGCGGCGCTGCCTGCTGCTGGCCGACGAAGAGAGAGAAAGAGAGATGGAGGAAGAGAGAAAGAATGGGCGTCTTCAACTTCTTCCCGGCGATCACCAGGCACCTCTTCCGCGGGCGTCTTCAGAAGGCTCACGCCCTCCGGCGGCGGAAGGAGGAGTTGTTCGTGCCGTTGATCAACTCCCGGCGGGAGTACAAGAAAAACGGCGGCGAGCCGAAGAAGGAGACGACCACGTTCACGCACTCGTACGTCGACAACCTGCTCGACATCAACCTCCCGGAGGACGGCAACCGCGCGCTCACCGACGACGAGCTGGTTATGCTCTGCTCCGAGTTCCTCGTAGCCGGCACGGACAGCACGTCCGCCGCGCTGCAATGGATCATGGCCGAGCTGGTCAGGAACCCATCCATCCAATCAAAGCTCTACGAGGAGATCAAGTCCAAGACCGGCGGCGGCGGCCAGCACGAGGTCTCCGAGGAGGACGTCCACGACATGCCGTACCTGAAGGCGGTGGTGCTCGAAGGCCTCCGGAAGCACCCACCGGCGCACATGCTGCTACCTCACAAGGCGGCGGAGGACATGGACGTCGGCGGGTACCTCATCCCCAAGGGCACCATAGTGAACTTCATGGTGGCTGAGATGGGCAGGGACGAGAAAGAATGGGAGAAGCCAATGGAGTTCATGCCGGAGCGGTTCCTCCCCGGCGGCGACGGCGAGGGGGTGGACGTGACGAGCAGCAAGGGGATCCGCATGATGCCGTTCGGCGTCGGGCGGCGGATTTGTCCCGGGCTCGGCATCGCCATGCTTCACCTGGAGTACTTCGTGGCCAACATGGTGAGGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGACTTCGCCGAGAAGCGGGAGTTCAACACCGTCATGGCCAAGCCGCTGCGCGTGCGCCTCGTGCCCCGGAGTACACTCGAATAA
More
|
||||||||||
| Protein seq | MAPCPPVAAEGGEVARATKCPPLTPLSRAVGRSARTPELAVVIFNVLGARRPSRPPHRARRSSRRREEGTAEGRLSRRAGMPASARRGDAASAPRGRRRAALLSAAAPNPSEQVSGKGSGARRSSSGQRWSSQQRVWLGSSYSGGSGSNDDDGGGWGMTPTTLPASPLPRRSPPSSARSLASSPPSSLPAPLVLRLDHRRRGLTLLSSRCCRPAPRRPASPRWTPAPTSPPSPPPRRAPPFAPTAGLPPRAAAHRIPSPALASPPWRAGVRGAACCWPTKREKERWRKRERMGVFNFFPAITRHLFRGRLQKAHALRRRKEELFVPLINSRREYKKNGGEPKKETTTFTHSYVDNLLDINLPEDGNRALTDDELVMLCSEFLVAGTDSTSAALQWIMAELVRNPSIQSKLYEEIKSKTGGGGQHEVSEEDVHDMPYLKAVVLEGLRKHPPAHMLLPHKAAEDMDVGGYLIPKGTIVNFMVAEMGRDEKEWEKPMEFMPERFLPGGDGEGVDVTSSKGIRMMPFGVGRRICPGLGIAMLHLEYFVANMVREFEWKEVAGDEVDFAEKREFNTVMAKPLRVRLVPRSTLE |
||||||||||
| Function | Cytochrome P450 89A2 [UniProtKB/Swiss-Prot:Q42602] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0515400 | Os10t0515400-00 | Chr10 | 19864246 | 19868374 | - | irgsp1_rep | ||
| CDS seq | ATGGCGCCGTGCCCCCCTGTCGCGGCGGAGGGCGGCGAAGTGGCGAGGGCGACGAAGTGCCCCCCTCTCACCCCTCTCTCTCGGGCCGTCGGGAGGTCGGCGCGCACGCCCGAGCTCGCTGTTGTCATCTTCAATGTCCTCGGCGCCCGCCGCCCGTCTCGCCCTCCCCACCGCGCCCGCCGGAGCTCGAGGCGGCGGGAGGAGGGGACAGCGGAGGGGAGGCTGTCGAGACGGGCTGGGATGCCGGCAAGCGCCCGCAGAGGGGATGCGGCGAGCGCGCCGAGAGGGAGGAGGCGGGCGGCGCTTCTCTCCGCCGCCGCGCCAAATCCGAGCGAGCAGGTGTCGGGGAAGGGTAGCGGGGCACGGCGGTCGTCGTCGGGCCAGAGGTGGTCGTCGCAGCAACGAGTATGGCTGGGCTCATCGTACTCTGGCGGGAGCGGCTCGAACGACGACGACGGTGGCGGCTGGGGGATGACTCCGACGACTCTCCCGGCCTCCCCGCTCCCTCGCCGGTCTCCTCCCTCCTCAGCCCGCTCCCTGGCCTCCTCACCTCCTTCCTCTCTGCCCGCCCCGCTCGTGCTCCGCCTGGACCACCGCCGCCGCGGCCTCACGCTGTTGTCCTCAAGATGCTGCCGGCCGGCGCCACGACGGCCCGCCTCTCCGCGATGGACGCCGGCGCCCACCTCTCCCCCATCCCCTCCACCTCGCCGCGCGCCGCCGTTCGCGCCGACCGCCGGCCTGCCCCCGCGCGCCGCTGCCCATCGCATCCCCTCGCCGGCGCTCGCCTCTCCACCATGGCGTGCCGGTGTGCGCGGCGCTGCCTGCTGCTGGCCGACGAAGAGAGAGAAAGAGAGATGGAGGAAGAGAGAAAGAATGGGCGTCTTCAACTTCTTCCCGGCGATCACCAGGCACCTCTTCCGCGGGCGTCTTCAGAAGGCTCACGCCCTCCGGCGGCGGAAGGAGGAGTTGTTCGTGCCGTTGATCAACTCCCGGCGGGAGTACAAGAAAAACGGCGGCGAGCCGAAGAAGGAGACGACCACGTTCACGCACTCGTACGTCGACAACCTGCTCGACATCAACCTCCCGGAGGACGGCAACCGCGCGCTCACCGACGACGAGCTGGTTATGCTCTGCTCCGAGTTCCTCGTAGCCGGCACGGACAGCACGTCCGCCGCGCTGCAATGGATCATGGCCGAGCTGGTCAGGAACCCATCCATCCAATCAAAGCTCTACGAGGAGATCAAGTCCAAGACCGGCGGCGGCGGCCAGCACGAGGTCTCCGAGGAGGACGTCCACGACATGCCGTACCTGAAGGCGGTGGTGCTCGAAGGCCTCCGGAAGCACCCACCGGCGCACATGCTGCTACCTCACAAGGCGGCGGAGGACATGGACGTCGGCGGGTACCTCATCCCCAAGGGCACCATAGTGAACTTCATGGTGGCTGAGATGGGCAGGGACGAGAAAGAATGGGAGAAGCCAATGGAGTTCATGCCGGAGCGGTTCCTCCCCGGCGGCGACGGCGAGGGGGTGGACGTGACGAGCAGCAAGGGGATCCGCATGATGCCGTTCGGCGTCGGGCGGCGGATTTGTCCCGGGCTCGGCATCGCCATGCTTCACCTGGAGTACTTCGTGGCCAACATGGTGAGGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGACTTCGCCGAGAAGCGGGAGTTCAACACCGTCATGGCCAAGCCGCTGCGCGTGCGCCTCGTGCCCCGGAGTACACTCGAATAA
More
|
|||||||
| Protein seq | MAPCPPVAAEGGEVARATKCPPLTPLSRAVGRSARTPELAVVIFNVLGARRPSRPPHRARRSSRRREEGTAEGRLSRRAGMPASARRGDAASAPRGRRRAALLSAAAPNPSEQVSGKGSGARRSSSGQRWSSQQRVWLGSSYSGGSGSNDDDGGGWGMTPTTLPASPLPRRSPPSSARSLASSPPSSLPAPLVLRLDHRRRGLTLLSSRCCRPAPRRPASPRWTPAPTSPPSPPPRRAPPFAPTAGLPPRAAAHRIPSPALASPPWRAGVRGAACCWPTKREKERWRKRERMGVFNFFPAITRHLFRGRLQKAHALRRRKEELFVPLINSRREYKKNGGEPKKETTTFTHSYVDNLLDINLPEDGNRALTDDELVMLCSEFLVAGTDSTSAALQWIMAELVRNPSIQSKLYEEIKSKTGGGGQHEVSEEDVHDMPYLKAVVLEGLRKHPPAHMLLPHKAAEDMDVGGYLIPKGTIVNFMVAEMGRDEKEWEKPMEFMPERFLPGGDGEGVDVTSSKGIRMMPFGVGRRICPGLGIAMLHLEYFVANMVREFEWKEVAGDEVDFAEKREFNTVMAKPLRVRLVPRSTLE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0515400 | RBH | 0.0 | 0.140031 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g37034 | SBH | 0.279885 | 0.062861 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0112900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017070 | SBH | 0.0 | 0.0 | 0.215859 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0017360 | SBH | 0.068878 | 0.138859 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0016840 | SBH | 0.155966 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0017320 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017050 | SBH | 0.0 | 0.000000 | 0.365718 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0327200 | SBH | 0 | 0.0071015 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0016970 | SBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0349600 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0016750 | RBH | 0.0 | 0.024326 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0016600 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0017190 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0016810 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0017280 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G016890 | SBH | 0.0 | 0.000000 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017070 | SBH | 0.000000 | 0.000000 | 0.000000 |
