Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0514700 | OGI:10060980 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:19847084-19848778 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TACACAACAGTTTAGCCTCGTCCGACAACCAACGCAAGCGAAAACAGCTGCCAACGCTGATGGATAATTTGGCCATCCTCACCGGCGTCCTTCTCCTCCCGCTCCTCGTCTTCCTGCGCGATGTCACCTCGAGGCGGCGCCGCCGCCTCCCGCCTGGCCCGCCGGCCGTGCCGCTGTTCGGCAACCTGCTGTGGCTGCGGCACTCGGCGGCCGAATTGGAGCCTCTGCTGCTGAAGCTGTTCGACAAGTACGGCCCCGTCGTGACGCTCCGGATCGGGTGGCGCCTCTCCATCTTCGTGGCGGATCGGCACCTGGCGCACGCGGCGCTCGTCGGCGCCGGCGCCACGCTGGCCGACCGGCCGCGGACGGCCACCAGCATGCTCCTCGGCGTCAGCGAGAATCATCACGCGCTCCAACTACGGCGCCATGTGGCGGCTGCTCCGCCGCAACCTCGTGTCGCAGACGCTGCAGCAGTCGCGCGTCGACCAGTTCACGCCGGCGCGCGTCTGGGCGCGCCGCGTCCTCATGGAGAAGCTGCGTGAGACGACGTCCGGCGTCAGCGGCGGCGGCGGCGACGCGCCGCCCAACGTAACGGAGGCGTTCCAGCACGCCGTGTTCTGCCTCCTCCTGCTCATGTGCTTCGGCGAGCGGCTCCACGAGCACGCCGTGCGCGACATCGAGGACGCCGAGCGCGCGTGGCTGCTCTACATCTCGAAGAAGACGAGCGTCTTCTTCTTCCTCCCGTGGATCACCAAGCACCTCTTCCGCGGCCGCCTCGAGGCCGGGCACGCCCTTCTGCGGCGGCAGAAGGAGCTCTTCGTGCCGCTGATCGAGGCTCGCCGGGAGTACAAGAAGCTCGCCAGCCAGGGCCTCCCGCCGGCGAGGGAGACGACGTTCCAGCACTCGTACGTCGACACGCTCCTCGACGTCAAGATCCCCGAGGAGGGCAACCGCTCGCTCACCGACGGCGAGATCGTCACGCTCTGCTCCGAGTTCCTCAACGCCGGCACCGACACCACCTCCACCGGGCTACAATGGATCATGGCCGAGCTAGTCAAGAACCCGGCCGTGCAGGAGAAGCTCCACGCCGAGATCAATGCCACCTGCGGCGACGACGGCGAGCTCCTGGAGCGGAGCGTGAGGGACAAGGACAACAAGATGCCGTACCTCAACCCCGTGGTCATGGAAGGCCTGCGCAAGCACCCACCGAGCCACACCCTGCTGCCGCACAAGGCGGCGGAGGACATAGACGTCGGCGGGTACCTCATCCCCAAGGGCGCCACGGTGAACTTCATGGTGGCAGAGATCGGAAGAGACGAGAGAGAATGGGAGAAGCCAATGGAGTTCATCCCGGAGCGCTTCCTCGCCGGCGGCGACGGCGACGGGGTCGACGTGACGGGCAGCAGGGAGATCCGGATGATGCCGTTCGGCGCCGGGCGGAGGATCTGCGCCGGGCTCAACGTCGGCGTGATGCACCTCGAGTACTTCGTGGGATCCATGGTGATGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGAGTTCGCCGAGAAGCTCGAGTTCACCACCGCCATGGCGAAGCCGCTGCGTCCGCGCCTTGTGCCCAGGAGGAGTCAGGCACTAATCAGAGTCTCACTGCTCATTTGCTCCCTCCGTTTCAAAATATTTGACACCGTTGACTTACTTGTTTGA
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| CDS seq | ATGTGGCGGCTGCTCCGCCGCAACCTCGTGTCGCAGACGCTGCAGCAGTCGCGCGTCGACCAGTTCACGCCGGCGCGCGTCTGGGCGCGCCGCGTCCTCATGGAGAAGCTGCGTGAGACGACGTCCGGCGTCAGCGGCGGCGGCGGCGACGCGCCGCCCAACGTAACGGAGGCGTTCCAGCACGCCGTGTTCTGCCTCCTCCTGCTCATGTGCTTCGGCGAGCGGCTCCACGAGCACGCCGTGCGCGACATCGAGGACGCCGAGCGCGCGTGGCTGCTCTACATCTCGAAGAAGACGAGCGTCTTCTTCTTCCTCCCGTGGATCACCAAGCACCTCTTCCGCGGCCGCCTCGAGGCCGGGCACGCCCTTCTGCGGCGGCAGAAGGAGCTCTTCGTGCCGCTGATCGAGGCTCGCCGGGAGTACAAGAAGCTCGCCAGCCAGGGCCTCCCGCCGGCGAGGGAGACGACGTTCCAGCACTCGTACGTCGACACGCTCCTCGACGTCAAGATCCCCGAGGAGGGCAACCGCTCGCTCACCGACGGCGAGATCGTCACGCTCTGCTCCGAGTTCCTCAACGCCGGCACCGACACCACCTCCACCGGGCTACAATGGATCATGGCCGAGCTAGTCAAGAACCCGGCCGTGCAGGAGAAGCTCCACGCCGAGATCAATGCCACCTGCGGCGACGACGGCGAGCTCCTGGAGCGGAGCGTGAGGGACAAGGACAACAAGATGCCGTACCTCAACCCCGTGGTCATGGAAGGCCTGCGCAAGCACCCACCGAGCCACACCCTGCTGCCGCACAAGGCGGCGGAGGACATAGACGTCGGCGGGTACCTCATCCCCAAGGGCGCCACGGTGAACTTCATGGTGGCAGAGATCGGAAGAGACGAGAGAGAATGGGAGAAGCCAATGGAGTTCATCCCGGAGCGCTTCCTCGCCGGCGGCGACGGCGACGGGGTCGACGTGACGGGCAGCAGGGAGATCCGGATGATGCCGTTCGGCGCCGGGCGGAGGATCTGCGCCGGGCTCAACGTCGGCGTGATGCACCTCGAGTACTTCGTGGGATCCATGGTGATGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGAGTTCGCCGAGAAGCTCGAGTTCACCACCGCCATGGCGAAGCCGCTGCGTCCGCGCCTTGTGCCCAGGAGGAGTCAGGCACTAATCAGAGTCTCACTGCTCATTTGCTCCCTCCGTTTCAAAATATTTGACACCGTTGACTTACTTGTTTGA
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| Protein seq | MWRLLRRNLVSQTLQQSRVDQFTPARVWARRVLMEKLRETTSGVSGGGGDAPPNVTEAFQHAVFCLLLLMCFGERLHEHAVRDIEDAERAWLLYISKKTSVFFFLPWITKHLFRGRLEAGHALLRRQKELFVPLIEARREYKKLASQGLPPARETTFQHSYVDTLLDVKIPEEGNRSLTDGEIVTLCSEFLNAGTDTTSTGLQWIMAELVKNPAVQEKLHAEINATCGDDGELLERSVRDKDNKMPYLNPVVMEGLRKHPPSHTLLPHKAAEDIDVGGYLIPKGATVNFMVAEIGRDEREWEKPMEFIPERFLAGGDGDGVDVTGSREIRMMPFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAGDEVEFAEKLEFTTAMAKPLRPRLVPRRSQALIRVSLLICSLRFKIFDTVDLLV |
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| Function | Cytochrome P450 89A2 [UniProtKB/Swiss-Prot:Q42602] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0514700 | Os10t0514700-00 | Chr10 | 19847084 | 19848778 | + | irgsp1_rep | ||
| CDS seq | ATGTGGCGGCTGCTCCGCCGCAACCTCGTGTCGCAGACGCTGCAGCAGTCGCGCGTCGACCAGTTCACGCCGGCGCGCGTCTGGGCGCGCCGCGTCCTCATGGAGAAGCTGCGTGAGACGACGTCCGGCGTCAGCGGCGGCGGCGGCGACGCGCCGCCCAACGTAACGGAGGCGTTCCAGCACGCCGTGTTCTGCCTCCTCCTGCTCATGTGCTTCGGCGAGCGGCTCCACGAGCACGCCGTGCGCGACATCGAGGACGCCGAGCGCGCGTGGCTGCTCTACATCTCGAAGAAGACGAGCGTCTTCTTCTTCCTCCCGTGGATCACCAAGCACCTCTTCCGCGGCCGCCTCGAGGCCGGGCACGCCCTTCTGCGGCGGCAGAAGGAGCTCTTCGTGCCGCTGATCGAGGCTCGCCGGGAGTACAAGAAGCTCGCCAGCCAGGGCCTCCCGCCGGCGAGGGAGACGACGTTCCAGCACTCGTACGTCGACACGCTCCTCGACGTCAAGATCCCCGAGGAGGGCAACCGCTCGCTCACCGACGGCGAGATCGTCACGCTCTGCTCCGAGTTCCTCAACGCCGGCACCGACACCACCTCCACCGGGCTACAATGGATCATGGCCGAGCTAGTCAAGAACCCGGCCGTGCAGGAGAAGCTCCACGCCGAGATCAATGCCACCTGCGGCGACGACGGCGAGCTCCTGGAGCGGAGCGTGAGGGACAAGGACAACAAGATGCCGTACCTCAACCCCGTGGTCATGGAAGGCCTGCGCAAGCACCCACCGAGCCACACCCTGCTGCCGCACAAGGCGGCGGAGGACATAGACGTCGGCGGGTACCTCATCCCCAAGGGCGCCACGGTGAACTTCATGGTGGCAGAGATCGGAAGAGACGAGAGAGAATGGGAGAAGCCAATGGAGTTCATCCCGGAGCGCTTCCTCGCCGGCGGCGACGGCGACGGGGTCGACGTGACGGGCAGCAGGGAGATCCGGATGATGCCGTTCGGCGCCGGGCGGAGGATCTGCGCCGGGCTCAACGTCGGCGTGATGCACCTCGAGTACTTCGTGGGATCCATGGTGATGGAGTTCGAGTGGAAGGAGGTGGCCGGCGACGAGGTGGAGTTCGCCGAGAAGCTCGAGTTCACCACCGCCATGGCGAAGCCGCTGCGTCCGCGCCTTGTGCCCAGGAGGAGTCAGGCACTAATCAGAGTCTCACTGCTCATTTGCTCCCTCCGTTTCAAAATATTTGACACCGTTGACTTACTTGTTTGA
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| Protein seq | MWRLLRRNLVSQTLQQSRVDQFTPARVWARRVLMEKLRETTSGVSGGGGDAPPNVTEAFQHAVFCLLLLMCFGERLHEHAVRDIEDAERAWLLYISKKTSVFFFLPWITKHLFRGRLEAGHALLRRQKELFVPLIEARREYKKLASQGLPPARETTFQHSYVDTLLDVKIPEEGNRSLTDGEIVTLCSEFLNAGTDTTSTGLQWIMAELVKNPAVQEKLHAEINATCGDDGELLERSVRDKDNKMPYLNPVVMEGLRKHPPSHTLLPHKAAEDIDVGGYLIPKGATVNFMVAEIGRDEREWEKPMEFIPERFLAGGDGDGVDVTGSREIRMMPFGAGRRICAGLNVGVMHLEYFVGSMVMEFEWKEVAGDEVEFAEKLEFTTAMAKPLRPRLVPRRSQALIRVSLLICSLRFKIFDTVDLLV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0514700 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g37070 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0514901 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0017100 | SBH | 1.981599 | 0.0 | 2.003459 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0017390 | RBH | 0.841404 | 0.0 | 1.049700 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0016870 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0017320 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0017080 | RBH | 10.465844 | 0.000000 | 9.528257 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0327000 | SBH | 0 | 0.007257 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0016970 | RBH | 0.000000 | 0.000000 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0350200 | SBH | 0.0111565 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0016750 | SBH | 0.0 | 0.024326 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0016600 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0017190 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0016840 | RBH | 0.652995 | 0.0 | 0.432273 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0017280 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G016910 | RBH | 0.705905 | 0.0 | 0.401406 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0017120 | SBH | 1.875026 | 0.0 | 4.738673 |
