Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0435300 | OGI:10048790 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:15506653-15507311 | ||||||||
| Gene Symbol | OsMB37, MB37, OsMB34, MB34 | ||||||||||
| DNA seq | TACCACATAATCAAGATCCCGGGGTACTCCAGCACCTTGAAAGTCGGTCATGGCCAGGCCCTCCGTACCTCTCCGTTCAGTGCGGGAGGTCGCACCTGGTATATCAGCTACTACCCAAACGGAGGGCGAGAAACCAACAAGCACTGCATCTCTTTCTTCATCCATCTTGACGATGACACGGTCAATGACGATGTCATGGCGCAGGTTACGTTCAGCTTGCTCGACCGACACAGGAATCCAGTGCGGTCACACACTATCACCACCACATTATATAACTTCTCGGTGCCTAATAGTAGCGCGCTTGGGTTCGAAAACTTCATTAGAAGGGACGAGTTACAACGATCGGAATATCTCAATGACGACTGCTTCGCTATCGCGGTTCGTCTGGTCATCACGGAGGAACCATCATCCTTCACGGTGCCCCCATCGAACATGCACCTAGATTATGGTGATCTTCTATCAAGCAAAGAGGGCACCGATATCGAGTTTGTGGTTCGCGGCGAGACATTTGCCGCACACAGGTTGGTGCTAGCGGCACGGTCGCTGGTGTTCAAGGCGGAGCTATTCAGACCAATGGAGGGAGGCACCACGGATGTCATAAAAATTGATAACATGGATGCACAAGTGTTTAAAGCTCTGCTTGTTTTTATCTACACGGA
More
|
||||||||||
| CDS seq | ATGGCGCAGGTTACGTTCAGCTTGCTCGACCGACACAGGAATCCAGTGCGGTCACACACTATCACCACCACATTATATAACTTCTCGGTGCCTAATAGTAGCGCGCTTGGGTTCGAAAACTTCATTAGAAGGGACGAGTTACAACGATCGGAATATCTCAATGACGACTGCTTCGCTATCGCGGTTCGTCTGGTCATCACGGAGGAACCATCATCCTTCACGGTGCCCCCATCGAACATGCACCTAGATTATGGTGATCTTCTATCAAGCAAAGAGGGCACCGATATCGAGTTTGTGGTTCGCGGCGAGACATTTGCCGCACACAGGTTGGTGCTAGCGGCACGGTCGCTGGTGTTCAAGGCGGAGCTATTCAGACCAATGGAGGGAGGCACCACGGATGTCATAAAAATTGATAACATGGATGCACAAGTGTTTAAAGCTCTGCTTGTTTTTATCTACACGGA
More
|
||||||||||
| Protein seq | MAQVTFSLLDRHRNPVRSHTITTTLYNFSVPNSSALGFENFIRRDELQRSEYLNDDCFAIAVRLVITEEPSSFTVPPSNMHLDYGDLLSSKEGTDIEFVVRGETFAAHRLVLAARSLVFKAELFRPMEGGTTDVIKIDNMDAQVFKALLVFIYT |
||||||||||
| Function | BTB/POZ and MATH domain-containing protein 3 [UniProtKB/Swiss-Prot:O22286] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0435300 | Os10t0435300-00 | Chr10 | 15506653 | 15507311 | + | irgsp1_rep | ||
| CDS seq | ATGGCGCAGGTTACGTTCAGCTTGCTCGACCGACACAGGAATCCAGTGCGGTCACACACTATCACCACCACATTATATAACTTCTCGGTGCCTAATAGTAGCGCGCTTGGGTTCGAAAACTTCATTAGAAGGGACGAGTTACAACGATCGGAATATCTCAATGACGACTGCTTCGCTATCGCGGTTCGTCTGGTCATCACGGAGGAACCATCATCCTTCACGGTGCCCCCATCGAACATGCACCTAGATTATGGTGATCTTCTATCAAGCAAAGAGGGCACCGATATCGAGTTTGTGGTTCGCGGCGAGACATTTGCCGCACACAGGTTGGTGCTAGCGGCACGGTCGCTGGTGTTCAAGGCGGAGCTATTCAGACCAATGGAGGGAGGCACCACGGATGTCATAAAAATTGATAACATGGATGCACAAGTGTTTAAAGCTCTGCTTGTTTTTATCTACACGGA
More
|
|||||||
| Protein seq | MAQVTFSLLDRHRNPVRSHTITTTLYNFSVPNSSALGFENFIRRDELQRSEYLNDDCFAIAVRLVITEEPSSFTVPPSNMHLDYGDLLSSKEGTDIEFVVRGETFAAHRLVLAARSLVFKAELFRPMEGGTTDVIKIDNMDAQVFKALLVFIYT |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0435300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g29840 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0434200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0011800 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0012080 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0011790 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0012070 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0011790 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0253800 | SBH | 0.2806765 | 0.3109105 | 1.1770635 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0011470 | RBH | 0.000000 | 0.022633 | 0.055922 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0277900 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011570 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0011550 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0011980 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0011560 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0012050 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G011940 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0011880 | RBH | 0.0 | 0.0 | 0.0 |
