Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0400200 | OGI:10044790 | 14/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:13497363-13499401 | ||||||||
| Gene Symbol | GLUA2, Glua2*, Glua2, GLUA-2, GluA-2, Glu20, GluA2, OsEnS-137, OsGluA2, GluA | ||||||||||
| DNA seq | CCATAAGATAAGGGAGGGTTGTCCATTCTCTGTTTTCTCATATTGATGAATCTCCAAGAGGATACCAACAGTACATTGGAACGGGAACACAAAAATAGAAAGACCATCTTGAGGGATGTCCTTAGCATTCAGAACTGATATTATAAGAAACTTTTACAGTACATAGCAGCAACGCAATTGCTTGCAATTTATTTATTTATTTATTTAGTTATTCTTTATCCGCATTGCCAACTTAAGAGGATTCCGCCACATTATAAACGTCTTGGTAGCTCTTGTATTGGAGGGGAGTGAATGCACCGAACTCATCTCCTCTGTTATGCTTGAGCCTCTGAGCCTCTTCTCTTGAGATGCGATATGCATTTGCTAGAACATCAGTTGGGAGAGCACGGAAGATGGAACTCTTTCCTGCAATGTGGCTTACCATAGAGTTAGGGTTTGTCTTGAATGCAATGTAAGCACATCCTTCTCTTTGTGCCTTCTTTACAACTACATAGTGTTGTGGTACAATAAGTAGCTGTCCACGACGAAGCTCTCCGTTGAACACCGTCTTTCCATTGTTGTTGACAACTTGAACCTGGGCTCGGCCTTGAGTAATATACACGATGCTGTGAGCGTTGATGTTCCAGAACGGTGAAAGGAGTGCATTCTGCAATAGAACAGATACACATCATTAAGCATATTGTGTGCATTAAAGCTTTTGCCAAGAAAAAAAATGTGCTGTTCATTTACCTGGTATAGATTTACTTTAACGGCGCTCATCTGTACAAGATTAAGAATGGGGAAATTCTGGCTGTTGAGATTTGTAACCCTTCCAGCTCTTGGGTTGTATGTATCAGCACGGTTAGGATTATCGATGTTTTGCCTTACCCTCATGGTGCAAAAGGTCTCATCCAAACCGTTAGGGCAGCCACTCCCATATTGACTTTGCTGATATCCTCCTTCTTGATAATGCTCTCTTGATTGCATTTGTCCTTGTTCCTGCTCTTGCAATGATGCATATGGTTGCAGCAAACTGAGCCCGCGTTCAACGCGGACAATTTCTCCTCTTTGGTCATTTTGACACTGGAGCTGCCTTGCAACTTGGTTGCTTATGCCAAAAGCCTCGCTAAGCAGTTCAGTGCTAAAGCCACTAAATATGTTTTGTGACCACTCCTCAACTTCACGCCTGTATGCTTGAGGGTTTCTCTTATTTCCAGCTAACAAGAAATCCTAACAATTGATTACGAGGTTAAATCATTGTCTAAGAAAAGTGGAATAAAAAGGTCAAAATAATAGTAAAATGTTTAGTTTTGGATAAGTTTTGCTTAATTACCCTCTGTCGAGGGTCAAGTTGATTAGCACCGTTGTTGATATCAGTGACATATATGGCAACAACCGGCACTTCACCATCATTGTAGCACCAATGAGCTACACCAGCAGGCAACGCGATAACATCTCCTTGTCTGAAACGGTGAATCTTTTGATGTTCATCCTTGAACTTATGGCTTTGGCTTTGACTTTCGGTCAATTGGGCTTGCCCTGATTGTTGGAACTGCTGCTGGTAGGTCTCAGGACAGCCTGGGAAAGTCGGCCCTGTTATACCTCTCCCTGAAAGTATGGCATGCATGTTAATTACAAGCAATGTAAATATCGCAGCCAATCATTAATTCATTATGCACTTAAATTGTTACACAAACCTTGGATGATATATACTAGAGATGCACCATTAGTGTAATGGGGTAGTAGTAGGCCTCTAGGTTCAATAACTCGGCGGACAACAGATACTCCGGTACATTGAAACAACTCATTAGAGACATCGAAGAACTCAGTTGTGCCAGCTTGAGACCTCACACTCCGAATTGGCTCAAATGCTTGCAACCTATCAAATCTACATCCTCTCGGACTTCCACGACGAGAACTCTGCCATTGACTAGTGCTCTGGCCTAATAGCTGCTGGGCTAGGGAGCCATCGCACAAGAGGAACAAGCAAACTGTGAAGAAAACTATGGGGCGATTTATGGATGCCATGTTGTTGTAGGACTAATGAACTGAATGCTTTT
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| CDS seq | ATGGCATCCATAAATCGCCCCATAGTTTTCTTCACAGTTTGCTTGTTCCTCTTGTGCGATGGCTCCCTAGCCCAGCAGCTATTAGGCCAGAGCACTAGTCAATGGCAGAGTTCTCGTCGTGGAAGTCCGAGAGGATGTAGATTTGATAGGTTGCAAGCATTTGAGCCAATTCGGAGTGTGAGGTCTCAAGCTGGCACAACTGAGTTCTTCGATGTCTCTAATGAGTTGTTTCAATGTACCGGAGTATCTGTTGTCCGCCGAGTTATTGAACCTAGAGGCCTACTACTACCCCATTACACTAATGGTGCATCTCTAGTATATATCATCCAAGGGAGAGGTATAACAGGGCCGACTTTCCCAGGCTGTCCTGAGACCTACCAGCAGCAGTTCCAACAATCAGGGCAAGCCCAATTGACCGAAAGTCAAAGCCAAAGCCATAAGTTCAAGGATGAACATCAAAAGATTCACCGTTTCAGACAAGGAGATGTTATCGCGTTGCCTGCTGGTGTAGCTCATTGGTGCTACAATGATGGTGAAGTGCCGGTTGTTGCCATATATGTCACTGATATCAACAACGGTGCTAATCAACTTGACCCTCGACAGAGGGATTTCTTGTTAGCTGGAAATAAGAGAAACCCTCAAGCATACAGGCGTGAAGTTGAGGAGTGGTCACAAAACATATTTAGTGGCTTTAGCACTGAACTGCTTAGCGAGGCTTTTGGCATAAGCAACCAAGTTGCAAGGCAGCTCCAGTGTCAAAATGACCAAAGAGGAGAAATTGTCCGCGTTGAACGCGGGCTCAGTTTGCTGCAACCATATGCATCATTGCAAGAGCAGGAACAAGGACAAATGCAATCAAGAGAGCATTATCAAGAAGGAGGATATCAGCAAAGTCAATATGGGAGTGGCTGCCCTAACGGTTTGGATGAGACCTTTTGCACCATGAGGGTAAGGCAAAACATCGATAATCCTAACCGTGCTGATACATACAACCCAAGAGCTGGAAGGGTTACAAATCTCAACAGCCAGAATTTCCCCATTCTTAATCTTGTACAGATGAGCGCCGTTAAAGTAAATCTATACCAGAATGCACTCCTTTCACCGTTCTGGAACATCAACGCTCACAGCATCGTGTATATTACTCAAGGCCGAGCCCAGGTTCAAGTTGTCAACAACAATGGAAAGACGGTGTTCAACGGAGAGCTTCGTCGTGGACAGCTACTTATTGTACCACAACACTATGTAGTTGTAAAGAAGGCACAAAGAGAAGGATGTGCTTACATTGCATTCAAGACAAACCCTAACTCTATGGTAAGCCACATTGCAGGAAAGAGTTCCATCTTCCGTGCTCTCCCAACTGATGTTCTAGCAAATGCATATCGCATCTCAAGAGAAGAGGCTCAGAGGCTCAAGCATAACAGAGGAGATGAGTTCGGTGCATTCACTCCCCTCCAATACAAGAGCTACCAAGACGTTTATAATGTGGCGGAATCCTCTTAA
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| Protein seq | MASINRPIVFFTVCLFLLCDGSLAQQLLGQSTSQWQSSRRGSPRGCRFDRLQAFEPIRSVRSQAGTTEFFDVSNELFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFPGCPETYQQQFQQSGQAQLTESQSQSHKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEVPVVAIYVTDINNGANQLDPRQRDFLLAGNKRNPQAYRREVEEWSQNIFSGFSTELLSEAFGISNQVARQLQCQNDQRGEIVRVERGLSLLQPYASLQEQEQGQMQSREHYQEGGYQQSQYGSGCPNGLDETFCTMRVRQNIDNPNRADTYNPRAGRVTNLNSQNFPILNLVQMSAVKVNLYQNALLSPFWNINAHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDEFGAFTPLQYKSYQDVYNVAESS |
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| Function | Glutelin type-A 2 [UniProtKB/Swiss-Prot:P07730] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0400200 | Os10t0400200-01 | Chr10 | 13497363 | 13499401 | - | irgsp1_rep | ||
| CDS seq | ATGGCATCCATAAATCGCCCCATAGTTTTCTTCACAGTTTGCTTGTTCCTCTTGTGCGATGGCTCCCTAGCCCAGCAGCTATTAGGCCAGAGCACTAGTCAATGGCAGAGTTCTCGTCGTGGAAGTCCGAGAGGATGTAGATTTGATAGGTTGCAAGCATTTGAGCCAATTCGGAGTGTGAGGTCTCAAGCTGGCACAACTGAGTTCTTCGATGTCTCTAATGAGTTGTTTCAATGTACCGGAGTATCTGTTGTCCGCCGAGTTATTGAACCTAGAGGCCTACTACTACCCCATTACACTAATGGTGCATCTCTAGTATATATCATCCAAGGGAGAGGTATAACAGGGCCGACTTTCCCAGGCTGTCCTGAGACCTACCAGCAGCAGTTCCAACAATCAGGGCAAGCCCAATTGACCGAAAGTCAAAGCCAAAGCCATAAGTTCAAGGATGAACATCAAAAGATTCACCGTTTCAGACAAGGAGATGTTATCGCGTTGCCTGCTGGTGTAGCTCATTGGTGCTACAATGATGGTGAAGTGCCGGTTGTTGCCATATATGTCACTGATATCAACAACGGTGCTAATCAACTTGACCCTCGACAGAGGGATTTCTTGTTAGCTGGAAATAAGAGAAACCCTCAAGCATACAGGCGTGAAGTTGAGGAGTGGTCACAAAACATATTTAGTGGCTTTAGCACTGAACTGCTTAGCGAGGCTTTTGGCATAAGCAACCAAGTTGCAAGGCAGCTCCAGTGTCAAAATGACCAAAGAGGAGAAATTGTCCGCGTTGAACGCGGGCTCAGTTTGCTGCAACCATATGCATCATTGCAAGAGCAGGAACAAGGACAAATGCAATCAAGAGAGCATTATCAAGAAGGAGGATATCAGCAAAGTCAATATGGGAGTGGCTGCCCTAACGGTTTGGATGAGACCTTTTGCACCATGAGGGTAAGGCAAAACATCGATAATCCTAACCGTGCTGATACATACAACCCAAGAGCTGGAAGGGTTACAAATCTCAACAGCCAGAATTTCCCCATTCTTAATCTTGTACAGATGAGCGCCGTTAAAGTAAATCTATACCAGAATGCACTCCTTTCACCGTTCTGGAACATCAACGCTCACAGCATCGTGTATATTACTCAAGGCCGAGCCCAGGTTCAAGTTGTCAACAACAATGGAAAGACGGTGTTCAACGGAGAGCTTCGTCGTGGACAGCTACTTATTGTACCACAACACTATGTAGTTGTAAAGAAGGCACAAAGAGAAGGATGTGCTTACATTGCATTCAAGACAAACCCTAACTCTATGGTAAGCCACATTGCAGGAAAGAGTTCCATCTTCCGTGCTCTCCCAACTGATGTTCTAGCAAATGCATATCGCATCTCAAGAGAAGAGGCTCAGAGGCTCAAGCATAACAGAGGAGATGAGTTCGGTGCATTCACTCCCCTCCAATACAAGAGCTACCAAGACGTTTATAATGTGGCGGAATCCTCTTAA
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| Protein seq | MASINRPIVFFTVCLFLLCDGSLAQQLLGQSTSQWQSSRRGSPRGCRFDRLQAFEPIRSVRSQAGTTEFFDVSNELFQCTGVSVVRRVIEPRGLLLPHYTNGASLVYIIQGRGITGPTFPGCPETYQQQFQQSGQAQLTESQSQSHKFKDEHQKIHRFRQGDVIALPAGVAHWCYNDGEVPVVAIYVTDINNGANQLDPRQRDFLLAGNKRNPQAYRREVEEWSQNIFSGFSTELLSEAFGISNQVARQLQCQNDQRGEIVRVERGLSLLQPYASLQEQEQGQMQSREHYQEGGYQQSQYGSGCPNGLDETFCTMRVRQNIDNPNRADTYNPRAGRVTNLNSQNFPILNLVQMSAVKVNLYQNALLSPFWNINAHSIVYITQGRAQVQVVNNNGKTVFNGELRRGQLLIVPQHYVVVKKAQREGCAYIAFKTNPNSMVSHIAGKSSIFRALPTDVLANAYRISREEAQRLKHNRGDEFGAFTPLQYKSYQDVYNVAESS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0400200 | RBH | 0.415760 | 0.898941 | 60.664322 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g26060 | RBH | 0.258045 | 0.554910 | 14.332433 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0762500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0009760 | RBH | 0.151022 | 1.360796 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0009860 | RBH | 0.066839 | 0.0 | 0.165994 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0009690 | RBH | 0.655904 | 0.651712 | 1.587447 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0010090 | RBH | 0.000000 | 0.030589 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0009840 | RBH | 1.626765 | 0.0 | 1.176646 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0231900 | SBH | 0.8625555 | 3.2202005 | 0.774642 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0009870 | RBH | 0.045888 | 0.250360 | 0.160308 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0297600 | SBH | 0.1228175 | 3.052432 | 0.029788 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0009640 | RBH | 0.085921 | 0.061899 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0009590 | RBH | 0.136658 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0010020 | RBH | 0.761400 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0009630 | RBH | 0.287709 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0010130 | RBH | 0.000000 | 1.465355 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G009940 | RBH | 0.144418 | 0.926006 | 1.754820 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0009910 | RBH | 0.247396 | 0.000000 | 0.472217 |
