Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0136200 | OGI:10008370 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:2243002-2245973 | ||||||||
| Gene Symbol | OsFbox525, Os_F0176 | ||||||||||
| DNA seq | GCCAAATGTTGACCATGGCCAAATATTTTCATAGCCAGAATAATTGGTAAGGCTAATACTGGCATAGAACCAAACAGGCTCTTACTCTAGTATTCACTTCTTTCATCTACCACTGTTCCTCCGGGTACAAAAGCAAAATCAAGAATGGTAGGGTAGCATCTTATCTTGGCGACTATAATTTTAGTCATATAGCATTGAAAGTTATTGGTTTCAGTATTTTTCTTCTCATCTTTGTCACATTGAAGCCAGATTCTATTAGCCATAATGCCCTTATTTTGCTCGCATTGGAGGCGTCAGCAATGATAGTGAGGGTGATGGATAAGGCAAGGAGCCACACACATGTTTGAACTCTTTCTCCATTGCCTTTGACAGGCTGCCTGCCAGCCCTAGCAATCCATCAAGATTGAGCTAAAATGGACAGAGAGGGCAATGTTAGTAATGTGCATATTGATTTTTGGACAAAAAAATCGGAGGAAATCTAACGGTTGTTTGGACGGAATGTTATAAGAGGGAGCAAAGACAACTTTAGCTGCTAATAATGTAAATCCATGTCCTTCAGTGTCTCAATAGAAGTTCAAGTATAATTCTTTGAAAGTATAGACCATAAGTATCCTGCTTACATTGGTAACAACAGAATGTACATAAAACTGTTACCAGTTTAGCCATATGCCCATATACGACTAAAGGCAATAACCAGAATTTGTATTCAGACCCAACTCAGCTAACAGCTCTATTGATACAAAGAGATAGAAACTCGAAAAACACTCTTAAAGGAGACTAGTAGACTACTGTTTTTACACAAGATCTATTGATGCATATTTTTCACATCCATGACCCATGGGCACCAGATATGTCTAGAAGCAAAAACAAGAAGAAAACACCTTTTTTCACAGCTCTTCAACAATGCAATCCAGCTTATTGAGCTCACTCGTCTGGTCCAATGGCTTCCATTGCTGCATAAAAGATTGGATCTTGTTGTATAAAATCGCAATGCAGAGGAGGTAACATTGTACTGAACACACAATTTTCCTGAGTTACAATATTTGCAGTAAAAACGATAGGATTCCTATCCAGTTCTACGAGCGAAATGATTCAACTACAGGAAAGCGCATTCGAAAACACCCAAAGTTTGACAAAACATAATAGGTTAGGTGACTTGATCTGTCTTCAAAGCATGCTTCCAACCCATTTTCTCTTATAGCCAATTTGGTTTTCCGAATGACTCTAGTTACAGAATAATATCAAAATGAATATCTGAAATTTTCATCTGCATTTTTTTTGTGACCCATAGATCTTTCATTTAAACTTCTACCATCCCTCCAAAAGTTAGACTTGGTAACATGCTACTGTACTAAAAGCATATTTTTAGTTTTTCTGTAGACAATCTCCACTTTCTACGCAACGAAATGCTGAAAAGACTTCTAACATAGCTACATGCTTGTAGAAACTTTAACAAATTATACTGTAAGAAAACAGAAATTGACATAAAGCAACAAACTTTCATGTATCTTCTTTAAATGTGGACATCCATAAAACTACATTTAGTTATAACATAAAAGAATAACACGCTATAATTATGAATGCATCAGTCTAACAAAAAAGTGAACAGAAAGCAAGTTAAATTGGTCAGCCAACAGATTAAAATCACAGTAAGGACATTCCAACAACTAAGTACATGGAAATAATTAGATCTTTTTATGCTAATGTTACATAAAAACAAGGAACTACCTGCAGTGTAGAAACTTGTGAAGGGATGACAGCGGGTGACGACATTGCAATCAAAAAGTTTCTTGGACTGCATTGAGTCAACTCGGAACATGTAGAAATCCGTATCCACCACTAAAATAAACGCATTAGGATCCTCGGAATATCCCACGATATCTGTTTTCTCTCTCTGCACAGCAGAACTCAGCCCAAGAATGTCATGCAGCTTGACAGTCTTCCACAGCACCCATTTCGCGGCACCTCCAAGAGTGACCTTCCTCTCCCACATTTGGAATCCGCGGTACGACAGAATGGCAAGGCCGACATTACCATCCTCCCCACGCATGATACAATAGTGGCAATCGCTAGAAAAATTCATCTGTGGCCAATTGCCATCGATCACAGCTAGGGTCGACGTCTCGAGATTGAACTCAAGAATGTGAGGCCCCCACACAGATAGCAACCAATAGAGTGAGTTGCCAACAAGTATGGCAGGTGAACCAAAATAGTAGATGGTGGATACAGGCCCTGTGAAGATGGCATCACCCCATTCGCCGGTCACCGATGAGTAAATTGAGGCGAAGATTCGCCCATCCATCTTGCTGGCGCCGATCAAGACCACCTTGAAGTGGCAGGACCGGAAGCCGCCGCCGTGCACGTGGCCGTCGTCGCCGGCGGCACAAAGCACCGCGCCGTTCATGACGGATCTCTCCCCACCGTCGAGCTCCTGCGGAACGGCCACGCGGCGGCGATCGCCGGAAACGGGATCCCACACGAGGAACTCGCAGGTGTTGTAGTTGAAGATGAGGACGAGGCCGTGGCGGCAGCCGAGGAGGCTCGCGGCGCGGTAGTCGTCGAGCCGCAGCGCGAAGCGGTCGGGCGGGATGAGATCCGGCGGGTCGAGGACGGATCTGAAGACGGGGTGGTGGAGCTCGTCCTTGAAGACGCCGAGGAGGGGGGGATCCCGGTGGCGGGCGCGGAAGCGGCGGAGGAAGGCGGGGTCGGAGACGAGGCGGCGCCACTGCTTGCAGACGAGGGAGGCGCGGGGGAGGGAGGAGGGATGCGAGGGGAGGCGGAGGAGGATCTCCTGGATGAGGTCGTCGTTGTCCGGCGGAAGCACCGGCGGCGGCGCCGGCGCCGCCGGGGATGTCCGCCGCCGCCGCCGCTGCCGGCGGCAGGTCATTTCGTCGCCATGGTCACTCATGGGAATCTCTGTCTCGTTTGTTCACTCTGGTTTAGTTTTTCTCCCACAAATTCGGGTAAAATTT
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| CDS seq | ATGAGTGACCATGGCGACGAAATGACCTGCCGCCGGCAGCGGCGGCGGCGGCGGACATCCCCGGCGGCGCCGGCGCCGCCGCCGGTGCTTCCGCCGGACAACGACGACCTCATCCAGGAGATCCTCCTCCGCCTCCCCTCGCATCCCTCCTCCCTCCCCCGCGCCTCCCTCGTCTGCAAGCAGTGGCGCCGCCTCGTCTCCGACCCCGCCTTCCTCCGCCGCTTCCGCGCCCGCCACCGGGATCCCCCCCTCCTCGGCGTCTTCAAGGACGAGCTCCACCACCCCGTCTTCAGATCCGTCCTCGACCCGCCGGATCTCATCCCGCCCGACCGCTTCGCGCTGCGGCTCGACGACTACCGCGCCGCGAGCCTCCTCGGCTGCCGCCACGGCCTCGTCCTCATCTTCAACTACAACACCTGCGAGTTCCTCGTGTGGGATCCCGTTTCCGGCGATCGCCGCCGCGTGGCCGTTCCGCAGGAGCTCGACGGTGGGGAGAGATCCGTCATGAACGGCGCGGTGCTTTGTGCCGCCGGCGACGACGGCCACGTGCACGGCGGCGGCTTCCGGTCCTGCCACTTCAAGGTGGTCTTGATCGGCGCCAGCAAGATGGATGGGCGAATCTTCGCCTCAATTTACTCATCGGTGACCGGCGAATGGGGTGATGCCATCTTCACAGGGCCTGTATCCACCATCTACTATTTTGGTTCACCTGCCATACTTGTTGGCAACTCACTCTATTGGTTGCTATCTGTGTGGGGGCCTCACATTCTTGAGTTCAATCTCGAGACGTCGACCCTAGCTGTGATCGATGGCAATTGGCCACAGATGAATTTTTCTAGCGATTGCCACTATTGTATCATGCGTGGGGAGGATGGTAATGTCGGCCTTGCCATTCTGTCGTACCGCGGATTCCAAATGTGGGAGAGGAAGGTCACTCTTGGAGGTGCCGCGAAATGGGTGCTGTGGAAGACTGTCAAGCTGCATGACATTCTTGGGCTGAGTTCTGCTGTGCAGAGAGAGAAAACAGATATCGTGGGATATTCCGAGGATCCTAATGCGTTTATTTTAGTGGTGGATACGGATTTCTACATGTTCCGAGTTGACTCAATGCAGTCCAAGAAACTTTTTGATTGCAATGTCGTCACCCGCTGTCATCCCTTCACAAGTTTCTACACTGCAGCAATGGAAGCCATTGGACCAGACGAGTGA
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| Protein seq | MSDHGDEMTCRRQRRRRRTSPAAPAPPPVLPPDNDDLIQEILLRLPSHPSSLPRASLVCKQWRRLVSDPAFLRRFRARHRDPPLLGVFKDELHHPVFRSVLDPPDLIPPDRFALRLDDYRAASLLGCRHGLVLIFNYNTCEFLVWDPVSGDRRRVAVPQELDGGERSVMNGAVLCAAGDDGHVHGGGFRSCHFKVVLIGASKMDGRIFASIYSSVTGEWGDAIFTGPVSTIYYFGSPAILVGNSLYWLLSVWGPHILEFNLETSTLAVIDGNWPQMNFSSDCHYCIMRGEDGNVGLAILSYRGFQMWERKVTLGGAAKWVLWKTVKLHDILGLSSAVQREKTDIVGYSEDPNAFILVVDTDFYMFRVDSMQSKKLFDCNVVTRCHPFTSFYTAAMEAIGPDE |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0136200 | Os10t0136200-01 | Chr10 | 2243002 | 2245973 | - | irgsp1_rep | ||
| CDS seq | ATGAGTGACCATGGCGACGAAATGACCTGCCGCCGGCAGCGGCGGCGGCGGCGGACATCCCCGGCGGCGCCGGCGCCGCCGCCGGTGCTTCCGCCGGACAACGACGACCTCATCCAGGAGATCCTCCTCCGCCTCCCCTCGCATCCCTCCTCCCTCCCCCGCGCCTCCCTCGTCTGCAAGCAGTGGCGCCGCCTCGTCTCCGACCCCGCCTTCCTCCGCCGCTTCCGCGCCCGCCACCGGGATCCCCCCCTCCTCGGCGTCTTCAAGGACGAGCTCCACCACCCCGTCTTCAGATCCGTCCTCGACCCGCCGGATCTCATCCCGCCCGACCGCTTCGCGCTGCGGCTCGACGACTACCGCGCCGCGAGCCTCCTCGGCTGCCGCCACGGCCTCGTCCTCATCTTCAACTACAACACCTGCGAGTTCCTCGTGTGGGATCCCGTTTCCGGCGATCGCCGCCGCGTGGCCGTTCCGCAGGAGCTCGACGGTGGGGAGAGATCCGTCATGAACGGCGCGGTGCTTTGTGCCGCCGGCGACGACGGCCACGTGCACGGCGGCGGCTTCCGGTCCTGCCACTTCAAGGTGGTCTTGATCGGCGCCAGCAAGATGGATGGGCGAATCTTCGCCTCAATTTACTCATCGGTGACCGGCGAATGGGGTGATGCCATCTTCACAGGGCCTGTATCCACCATCTACTATTTTGGTTCACCTGCCATACTTGTTGGCAACTCACTCTATTGGTTGCTATCTGTGTGGGGGCCTCACATTCTTGAGTTCAATCTCGAGACGTCGACCCTAGCTGTGATCGATGGCAATTGGCCACAGATGAATTTTTCTAGCGATTGCCACTATTGTATCATGCGTGGGGAGGATGGTAATGTCGGCCTTGCCATTCTGTCGTACCGCGGATTCCAAATGTGGGAGAGGAAGGTCACTCTTGGAGGTGCCGCGAAATGGGTGCTGTGGAAGACTGTCAAGCTGCATGACATTCTTGGGCTGAGTTCTGCTGTGCAGAGAGAGAAAACAGATATCGTGGGATATTCCGAGGATCCTAATGCGTTTATTTTAGTGGTGGATACGGATTTCTACATGTTCCGAGTTGACTCAATGCAGTCCAAGAAACTTTTTGATTGCAATGTCGTCACCCGCTGTCATCCCTTCACAAGTTTCTACACTGCAGCAATGGAAGCCATTGGACCAGACGAGTGA
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| Protein seq | MSDHGDEMTCRRQRRRRRTSPAAPAPPPVLPPDNDDLIQEILLRLPSHPSSLPRASLVCKQWRRLVSDPAFLRRFRARHRDPPLLGVFKDELHHPVFRSVLDPPDLIPPDRFALRLDDYRAASLLGCRHGLVLIFNYNTCEFLVWDPVSGDRRRVAVPQELDGGERSVMNGAVLCAAGDDGHVHGGGFRSCHFKVVLIGASKMDGRIFASIYSSVTGEWGDAIFTGPVSTIYYFGSPAILVGNSLYWLLSVWGPHILEFNLETSTLAVIDGNWPQMNFSSDCHYCIMRGEDGNVGLAILSYRGFQMWERKVTLGGAAKWVLWKTVKLHDILGLSSAVQREKTDIVGYSEDPNAFILVVDTDFYMFRVDSMQSKKLFDCNVVTRCHPFTSFYTAAMEAIGPDE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0136200 | Os10t0136200-02 | Chr10 | 2243570 | 2245899 | - | irgsp1_rep | ||
| CDS seq | ATGACCTGCCGCCGGCAGCGGCGGCGGCGGCGGACATCCCCGGCGGCGCCGGCGCCGCCGCCGGTGCTTCCGCCGGACAACGACGACCTCATCCAGGAGATCCTCCTCCGCCTCCCCTCGCATCCCTCCTCCCTCCCCCGCGCCTCCCTCGTCTGCAAGCAGTGGCGCCGCCTCGTCTCCGACCCCGCCTTCCTCCGCCGCTTCCGCGCCCGCCACCGGGATCCCCCCCTCCTCGGCGTCTTCAAGGACGAGCTCCACCACCCCGTCTTCAGATCCGTCCTCGACCCGCCGGATCTCATCCCGCCCGACCGCTTCGCGCTGCGGCTCGACGACTACCGCGCCGCGAGCCTCCTCGGCTGCCGCCACGGCCTCGTCCTCATCTTCAACTACAACACCTGCGAGTTCCTCGTGTGGGATCCCGTTTCCGGCGATCGCCGCCGCGTGGCCGTTCCGCAGGAGCTCGACGGTGGGGAGAGATCCGTCATGAACGGCGCGGTGCTTTGTGCCGCCGGCGACGACGGCCACGTGCACGGCGGCGGCTTCCGGTCCTGCCACTTCAAGGTGGTCTTGATCGGCGCCAGCAAGATGGATGGGCGAATCTTCGCCTCAATTTACTCATCGGTGACCGGCGAATGGGGTGATGCCATCTTCACAGGGCCTGTATCCACCATCTACTATTTTGGTTCACCTGCCATACTTGTTGGCAACTCACTCTATTGGTTGCTATCTGTGTGGGGGCCTCACATTCTTGAGTTCAATCTCGAGACGTCGACCCTAGCTGTGATCGATGGCAATTGGCCACAGATGAATTTTTCTAGCGATTGCCACTATTGTATCATGCGTGGGGAGGATGGTAATGTCGGCCTTGCCATTCTGTCGTACCGCGGATTCCAAATGTGGGAGAGGAAGGTCACTCTTGGAGGTGCCGCGAAATGGGTGCTGTGGAAGACTGTCAAGCTGCATGACATTCTTGGGCTGAGTTCTGCTGTGCAGAGAGAGAAAACAGATATCGTGGGATATTCCGAGGATCCTAATGCGTTTATTTTAGTGGTGGATACGGATTTCTACATGTTCCGAGTTGACTCAATGCAGTCCAAGAAACTTTTTGATTGCAATGTCGTCACCCGCTGTCATCCCTTCACAAGTTTCTACACTGCAGCAATGGAAGCCATTGGACCAGACGAGTGA
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| Protein seq | MTCRRQRRRRRTSPAAPAPPPVLPPDNDDLIQEILLRLPSHPSSLPRASLVCKQWRRLVSDPAFLRRFRARHRDPPLLGVFKDELHHPVFRSVLDPPDLIPPDRFALRLDDYRAASLLGCRHGLVLIFNYNTCEFLVWDPVSGDRRRVAVPQELDGGERSVMNGAVLCAAGDDGHVHGGGFRSCHFKVVLIGASKMDGRIFASIYSSVTGEWGDAIFTGPVSTIYYFGSPAILVGNSLYWLLSVWGPHILEFNLETSTLAVIDGNWPQMNFSSDCHYCIMRGEDGNVGLAILSYRGFQMWERKVTLGGAAKWVLWKTVKLHDILGLSSAVQREKTDIVGYSEDPNAFILVVDTDFYMFRVDSMQSKKLFDCNVVTRCHPFTSFYTAAMEAIGPDE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0136200 | RBH | 0.562583 | 0.627788 | 2.564697 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g04700 | RBH | 0.378683 | 0.399325 | 0.626337 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0138000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0001870 | SBH | 0.119905 | 5.583566 | 4.447401 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0001840 | SBH | 0.044863 | 0.376805 | 2.626086 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0001820 | RBH | 0.118092 | 4.930942 | 4.651556 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0001800 | RBH | 0.0 | 0.112017 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001740 | RBH | 3.015941 | 4.010543 | 5.360751 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0039200 | RBH | 1.275105 | 3.129006 | 2.918844 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0001920 | RBH | 0.097706 | 0.119665 | 0.279432 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0043600 | RBH | 1.3154565 | 2.7056175 | 6.260182 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0001760 | RBH | 0.047850 | 0.030984 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001820 | RBH | 0.163402 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0001890 | RBH | 0.907097 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0001720 | RBH | 0.000000 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0001880 | RBH | 0.0 | 2.117071 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G001880 | SBH | 0.0 | 1.142626 | 1.420479 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0001750 | RBH | 0.0 | 0.0 | 0.601005 |
