Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os10g0124700 | OGI:10006360 | 6/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr10:1562608-1565335 | ||||||||
| Gene Symbol | OsFbox508, Os_F0127 | ||||||||||
| DNA seq | ACTGAAAACATGTAATGTAACATGCAGTTCACTTTGTTCTTTGAGCATCAACAGAAGTAGCCACACATTCTGTTATCACTGTTTTTTGGGGAAAATTTTCCAAACAAGTAAACCACCCTGTCGGAATTTGAGACCTTACATGCAACTCAAGACACACTTGTTTGTTCTCAAGCCATATCAGCAAACGAGTGCAGTAAACATGTCTATCTGCCTTCAAATTCTAATTGAAGAAATGCATGCACTTAGGCTCATCCAACAAACAGCGTGATCATATTGACGACTAGTGACAAGTGAATGCATGATCCTTTTGTCATTCCGCATGTTCTTGTGCAGTCGTACTGTCGTAATCAAATCTGAAAAAAATCATCTGAATAGTACTGCTTGTAACTGCTTTTGCGATTAATCTGAAGAGAGTTCATGCCACTAGTAACAAAGATGTCCTCCACGAGCTTGAGCAAAGTACTATCATCCTCCGAGCATATGACTTCAACAATCTTAAGGTGCTCACATTCAAATGATCTTTCTTCAAGCTTATCAATGATTACCTACAGTAGGAAAATGGTAAGTTTTATCCTGATAACACATACGCTAAGCATACATGTGGAGAAAAGCTTCTACCTCAGGGGGGTCCAGAGTCAGCTTCTCTAGTTTCGGTGAGTTCTTAAGGAAGACAGTTAATGCATATAACTTTGAGCCCAGACAAAACTGACCCAGACTCAGGTTTACAAGATCTTTGAATTCTGGACACCATTGCGTATTTTTTGCGATTGTGACCTGCACAAGGTTTAAATGATTAGGAGGCTACCCAAAACGCATGCCACATTATGGAAACATTTTCCCGATTCACACCCACACACGCTAAAAAATAGCGCACCGAATCATGCAATAAGTACTCTGTTTTGAGTGAATGTTAAAAGAACATGACAGAAACAAAAACTAAGTTTAACTAAAATCCACATTGAACAATGATTTACTTGCTTTATTGAGAATACATAACCTGGATTTTATGTGACTTAATTGACAGGATGTTTTCATTGCAAATAAGGTAGATACACTAGTGAAAACACGGTATCTATCTATAGTTCTATACGTACTGGTTTCCATAGAAGTTAACTAATCACCCCTGTATTCAACCAGATCAAAACATGCCGGTGTTAGTGCTCCAGTCGCTGTCTGAAATTAAAATGCCCACTAATTAAGGCATTTCAGTTCATCGGGTCGATGAATCTGTAAGTGAACTGAGTATAAGGAATTGATTGCATCGAGTTGACTTCTGACAGCACAAATCATCCTATCAATAAATCATTCATAAGAATCAATTATGCACACCTAGTTTTGCATGAAACAGAAGTTTCTCCATTTATTGTACTGGCACATGCTGCATTGACATGGTAGGAAAAGAGGAAATATGTCAGATCAGGATACATACCATTTTCTGCGGGCACTCCAAGTCCAAATTTCTGACACCAGAAAGGCTCATGAGCAACTCATGGATATCAGTATTATCGTCGAGAATAATGGAAGCAGACACTAGTGATTTCATGTCCTTTAGTGAAGGTACACTGGCATCAGGTTTATACAATGTCAGAGAAGTGAGGCTCGGAGTAGAAATAGAAGCACGGTAGTCCTCCGAAAACCGAGAAGCATAGATGTTCAAAGTCTTGAGAGTGGTTGAGGAAATCTCATCATCCAGAATGATGCAATCATTCAAGAACACATCTTCCAACTGTGGGCAGCCTCTGCTGAGTTGCTCGAAGAAACCCATGCGGAGATAAGCATTGGAGAGGCCCAATTTTCTCAAGTAGTCTGAGGTAAATACAGCATGGTCTAGCATCAATGGAAATTGAAATGTGAGAACCTCCACGACCGGGGTCTGCAACTGCAACGCATGGCTGATCCACAGACCAGCTTCTGCTGAAGCTTTCTCGTTGTTGTTGCCGTCAGACACCTGGTACCTGAGCCAGAACTTGTCCAGCAAGGGGACGGGGTCACGGCGTAGCAGCAGCGTGCTCACGAACTTCTTGAACCGCGCCTCCTGCACCTTCTCTTTCTTCTCATCCAAGCAGGCGAAGCAGAACTCGGTGTAGTCGGCGTTGATGCGTGGCAGGGAGCGCCAGAGGTGGCGCCACCGCCGCGACAGCACGCACGTCTGCACGGACTGGCGCGCGTTGAGGAAGGACATGATGCGGCGGAGGACGTTGTCCGGGAGGGCGCTGAGCCTGTCTCTGCCGGGGGCATGAGCCGGCTCCATCATCACCCGCCCGTCCGTCCTGTGGCGTTCCGTCGAACAGGTGGTGCGCGTGGACGCTGCAGGCAGCGGGGAAGACCAAGAACCAAGAATCCATGAATCCTCAACTCGAACGGGAGCAGCAAGACATAAGAATGTTCGAAGAGGAACAAGACAACAGGGGGGGAGGGAGGCGGGGAGGAAGAAGGAACGTACCTCGAGTTGCCGGTGGCGCGCGCGTGGCGGCAGGTGTCACAGGGGCGTTCCGTCGAACAGGTGGCGCGCGCGGAACCTGCAGAAAGGGAAAAACCGAATAACCAAGAATCCATGATGAATCCTCGACTCCATGGGAGCGAAACGATGCAAGGATGACTGATCAGGCAGGAACGCTTTAGGTGAAAAGAAAAATTCAACGATCAAAATGCAAAAGGATGGGAGGGAATCGAGGAGGAGGAGGGAGACGACGCATACCTCGACGAAACGAAGCGTCTCTCTCGCTGT
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| CDS seq | ATGATGGAGCCGGCTCATGCCCCCGGCAGAGACAGGCTCAGCGCCCTCCCGGACAACGTCCTCCGCCGCATCATGTCCTTCCTCAACGCGCGCCAGTCCGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCGCCACCTCTGGCGCTCCCTGCCACGCATCAACGCCGACTACACCGAGTTCTGCTTCGCCTGCTTGGATGAGAAGAAAGAGAAGGTGCAGGAGGCGCGGTTCAAGAAGTTCGTGAGCACGCTGCTGCTACGCCGTGACCCCGTCCCCTTGCTGGACAAGTTCTGGCTCAGGTACCAGGTGTCTGACGGCAACAACAACGAGAAAGCTTCAGCAGAAGCTGGTCTGTGGATCAGCCATGCGTTGCAGTTGCAGACCCCGGTCGTGGAGGTTCTCACATTTCAATTTCCATTGATGCTAGACCATGCTGTATTTACCTCAGACTACTTGAGAAAATTGGGCCTCTCCAATGCTTATCTCCGCATGGGTTTCTTCGAGCAACTCAGCAGAGGCTGCCCACAGTTGGAAGATGTGTTCTTGAATGATTGCATCATTCTGGATGATGAGATTTCCTCAACCACTCTCAAGACTTTGAACATCTATGCTTCTCGGTTTTCGGAGGACTACCGTGCTTCTATTTCTACTCCGAGCCTCACTTCTCTGACATTGTATAAACCTGATGCCAGTGTACCTTCACTAAAGGACATGAAATCACTAGTGTCTGCTTCCATTATTCTCGACGATAATACTGATATCCATGAGTTGCTCATGAGCCTTTCTGGTGTCAGAAATTTGGACTTGGAGTGCCCGCAGAAAATGGTCACAATCGCAAAAAATACGCAATGGTGTCCAGAATTCAAAGATCTTGTAAACCTGAGTCTGGGTCAGTTTTGTCTGGGCTCAAAGTTATATGCATTAACTGTCTTCCTTAAGAACTCACCGAAACTAGAGAAGCTGACTCTGGACCCCCCTGAGGTAATCATTGATAAGCTTGAAGAAAGATCATTTGAATGTGAGCACCTTAAGATTGTTGAAGTCATATGCTCGGAGGATGATAGTACTTTGCTCAAGCTCGTGGAGGACATCTTTGTTACTAGTGGCATGAACTCTCTTCAGATTAATCGCAAAAGCAGTTACAAGCAGTACTATTCAGATGATTTTTTTCAGATTTGA
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| Protein seq | MMEPAHAPGRDRLSALPDNVLRRIMSFLNARQSVQTCVLSRRWRHLWRSLPRINADYTEFCFACLDEKKEKVQEARFKKFVSTLLLRRDPVPLLDKFWLRYQVSDGNNNEKASAEAGLWISHALQLQTPVVEVLTFQFPLMLDHAVFTSDYLRKLGLSNAYLRMGFFEQLSRGCPQLEDVFLNDCIILDDEISSTTLKTLNIYASRFSEDYRASISTPSLTSLTLYKPDASVPSLKDMKSLVSASIILDDNTDIHELLMSLSGVRNLDLECPQKMVTIAKNTQWCPEFKDLVNLSLGQFCLGSKLYALTVFLKNSPKLEKLTLDPPEVIIDKLEERSFECEHLKIVEVICSEDDSTLLKLVEDIFVTSGMNSLQINRKSSYKQYYSDDFFQI |
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| Function | MEIOTIC F-BOX protein MOF [UniProtKB/Swiss-Prot:Q7X7A4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os10g0124700 | Os10t0124700-01 | Chr10 | 1562608 | 1565335 | - | irgsp1_rep | ||
| CDS seq | ATGATGGAGCCGGCTCATGCCCCCGGCAGAGACAGGCTCAGCGCCCTCCCGGACAACGTCCTCCGCCGCATCATGTCCTTCCTCAACGCGCGCCAGTCCGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCGCCACCTCTGGCGCTCCCTGCCACGCATCAACGCCGACTACACCGAGTTCTGCTTCGCCTGCTTGGATGAGAAGAAAGAGAAGGTGCAGGAGGCGCGGTTCAAGAAGTTCGTGAGCACGCTGCTGCTACGCCGTGACCCCGTCCCCTTGCTGGACAAGTTCTGGCTCAGGTACCAGGTGTCTGACGGCAACAACAACGAGAAAGCTTCAGCAGAAGCTGGTCTGTGGATCAGCCATGCGTTGCAGTTGCAGACCCCGGTCGTGGAGGTTCTCACATTTCAATTTCCATTGATGCTAGACCATGCTGTATTTACCTCAGACTACTTGAGAAAATTGGGCCTCTCCAATGCTTATCTCCGCATGGGTTTCTTCGAGCAACTCAGCAGAGGCTGCCCACAGTTGGAAGATGTGTTCTTGAATGATTGCATCATTCTGGATGATGAGATTTCCTCAACCACTCTCAAGACTTTGAACATCTATGCTTCTCGGTTTTCGGAGGACTACCGTGCTTCTATTTCTACTCCGAGCCTCACTTCTCTGACATTGTATAAACCTGATGCCAGTGTACCTTCACTAAAGGACATGAAATCACTAGTGTCTGCTTCCATTATTCTCGACGATAATACTGATATCCATGAGTTGCTCATGAGCCTTTCTGGTGTCAGAAATTTGGACTTGGAGTGCCCGCAGAAAATGGTCACAATCGCAAAAAATACGCAATGGTGTCCAGAATTCAAAGATCTTGTAAACCTGAGTCTGGGTCAGTTTTGTCTGGGCTCAAAGTTATATGCATTAACTGTCTTCCTTAAGAACTCACCGAAACTAGAGAAGCTGACTCTGGACCCCCCTGAGGTAATCATTGATAAGCTTGAAGAAAGATCATTTGAATGTGAGCACCTTAAGATTGTTGAAGTCATATGCTCGGAGGATGATAGTACTTTGCTCAAGCTCGTGGAGGACATCTTTGTTACTAGTGGCATGAACTCTCTTCAGATTAATCGCAAAAGCAGTTACAAGCAGTACTATTCAGATGATTTTTTTCAGATTTGA
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| Protein seq | MMEPAHAPGRDRLSALPDNVLRRIMSFLNARQSVQTCVLSRRWRHLWRSLPRINADYTEFCFACLDEKKEKVQEARFKKFVSTLLLRRDPVPLLDKFWLRYQVSDGNNNEKASAEAGLWISHALQLQTPVVEVLTFQFPLMLDHAVFTSDYLRKLGLSNAYLRMGFFEQLSRGCPQLEDVFLNDCIILDDEISSTTLKTLNIYASRFSEDYRASISTPSLTSLTLYKPDASVPSLKDMKSLVSASIILDDNTDIHELLMSLSGVRNLDLECPQKMVTIAKNTQWCPEFKDLVNLSLGQFCLGSKLYALTVFLKNSPKLEKLTLDPPEVIIDKLEERSFECEHLKIVEVICSEDDSTLLKLVEDIFVTSGMNSLQINRKSSYKQYYSDDFFQI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0124700 | RBH | 0.000000 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g03620 | RBH | 0.000000 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0126600 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0001210 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0001320 | SBH | 0.0 | 0.000000 | 0.258965 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0001190 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0001130 | RBH | 0.0 | 0.031272 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0001250 | SBH | 0.182822 | 1.198121 | 1.104233 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0029800 | SBH | 1.0100415 | 3.403159 | 1.340797 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0001190 | RBH | 0.0 | 0.114257 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0034200 | SBH | 2.079148 | 2.0945665 | 7.0703795 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0001270 | SBH | 0.012983 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0001350 | SBH | 0.214049 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0001150 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0001200 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0001660 | SBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G001290 | SBH | 0.0 | 0.517712 | 0.552608 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0001260 | SBH | 0.0 | 3.873414 | 1.278980 |
