Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os09g0543900 | OGI:09062840 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr09:21450584-21452639 | ||||||||
| Gene Symbol | PHT3, Os-PHT3, OsPHT3 | ||||||||||
| DNA seq | GTACATCCAAAGCAAAGCAAAGCAAAGCAAAGCATCAAGCTCACACCTCGAGAGTACGAGCTCGAGCTTAGCCAAGCAATCAAGCTTACTTGCCTTCTTCTTCTTCTTCTTCCTTGAGTTGATTGATTGCTACTAGCTCAGACAGCAATGGAGGTCAAGGTATTGAGCAGCAAGCTCGTCAAGCCCGCCTACAATGGCGGTGTCGCCGCGGCCCCCGACGTGGAGTATATTCCTTTGTCGATCTTCGACAAGGTGACGTACAAGATGCAGATGGCGATCATCTACGCGTTCCCGCCGCCGGCGCCGTCGACGGCGGCCATCGAGAAGGGGCTCGCGGCGGTGCTCGCGCAGTACCGCGCGTTCGCGGGGCAGCTCGGGGAGTCGCCCGACGGCGAGGCGGCGGTGGTGCTGAACGACCGCGGCGCGCGGCTGGTGGAGGCGGCGGTGGACGCCGACCTCGTGGACATGGCGCCGGCGAAGCCCACGCCGGAGCTGCTCCGGCTGCACCCGGACCTGGAGGGGGAGCTCCAGGAGGTGGTGCTGCTCCAGCTGACGCGGTTCAGGTGCGGCTCCCTCGCCGTCGGGTTCACCTCCAACCACGTCGTCGCCGACGGCCACGCCACCAGCAACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGGCTCCCCATGGGCGCCCCGCCCGTGCACCACCACGCCGCCCTCTTCAAGCCCCGCCCCTCGCCGCACGTCGAGCACGACCACCGCAACAGAGAGTACTACCTCCCCGCCGCCGGCGACGACAGCCACGGCCACGGCGACGGCGGCGCGGCGGACAACATCGTGATCCACAAGGCGCACTTCACCAAGGACTTCATCGCCGGCCTCCGCGCGGCGGCGTCGGAGGGGCGCGGCCGGCCGTTCAGCCGGTTCGAGACCATCCTCGCCCACCTATGGCGCACTATGACGCGCGCCCGCGGGCTCAGCCCCGACGAGGCCTCCACCATCCGCCTCTCCGTCGACGGCCGCCACCGCCTCGGCGCGCCGGCGGAGTACTTCGGCAACCTCGTCCTCTGGGCGTTCCCGCGCGCCACCGTCGGCGACCTCCTCACCCGGCCGCTCAAGCACGCCGCGCAGGTGATCCACGACGAGGTGGCGCGCGTCGACGGCGCCTACTTCCGCTCCTTCCTCGACTTCGCCCTCTCCGGCGCCGGCGGCGACAAGGAGGGGCTCGCGCCGAGCGCCGTGCTCAAGGACGTGCTGTGCCCGAACGCCGAGGTGGACAGCTGGCTCACCTTCCCGTTCTACGAGCTCGACTTCGGCACCGGCAGCCCGACCTACTTCATGCCGTCGTACTTTCCGACGGAGGGGATGCTGTTCCTGGTGCCGTCGTACCTCGGCGACGGCAGCGTCGACGCCTTCGTCCCCGTCTTCAACCACAACCTCGAGGCATTCAAGGAGTGCTGCTACTCCATGGAGTAAAATTCAAAATCAAAATCAAAATCAAATCATTTATTCGTTATTATTATTGATTATGGAGTAATAATAATAAGTTAAATTTTTATTATTATTCCATTGTCTTAAAAGCAAATTATGGATTAATGATATATATAGAAGAAGAGAGGGAAATTCAAGATTTAGGTAGTGAATTAACCATTTCTTTTCACCATTTTGTACGTATGCATGTGCATGGGTACGTACAAAAAGAAAGGAAAAGGTTACAGGCTGGGTACTTAGTACGTGCCAAATTGGTGCCAACGCGGGGGGTGGTTAGATGTCGAGGTTATCAATTTGGTGAGGGGTGGTTATTAGGTTGAAGCGCACGTTAATTAATCAAATTAATTATAAGGCGTTTGCTTGTTTGTTTACGAATTACGACAACGTATACAGTACGAGGAGTACTATATTTTCTTCTACTGTTTTTTTTTTCTGGCTTGGATTCATTTAGCTTGGATCAGGGGCGTTTCCATGTTTCACCAAGTTTTGGATGATATCTGTGTAACACACTGTATGTAAACCGGTCTAGTATAGTATTTGTTTAAGAGGTGAATGGAAATGTTGCTTGGAATTCGGCTAT
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| CDS seq | ATGGAGGTCAAGGTATTGAGCAGCAAGCTCGTCAAGCCCGCCTACAATGGCGGTGTCGCCGCGGCCCCCGACGTGGAGTATATTCCTTTGTCGATCTTCGACAAGGTGACGTACAAGATGCAGATGGCGATCATCTACGCGTTCCCGCCGCCGGCGCCGTCGACGGCGGCCATCGAGAAGGGGCTCGCGGCGGTGCTCGCGCAGTACCGCGCGTTCGCGGGGCAGCTCGGGGAGTCGCCCGACGGCGAGGCGGCGGTGGTGCTGAACGACCGCGGCGCGCGGCTGGTGGAGGCGGCGGTGGACGCCGACCTCGTGGACATGGCGCCGGCGAAGCCCACGCCGGAGCTGCTCCGGCTGCACCCGGACCTGGAGGGGGAGCTCCAGGAGGTGGTGCTGCTCCAGCTGACGCGGTTCAGGTGCGGCTCCCTCGCCGTCGGGTTCACCTCCAACCACGTCGTCGCCGACGGCCACGCCACCAGCAACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGGCTCCCCATGGGCGCCCCGCCCGTGCACCACCACGCCGCCCTCTTCAAGCCCCGCCCCTCGCCGCACGTCGAGCACGACCACCGCAACAGAGAGTACTACCTCCCCGCCGCCGGCGACGACAGCCACGGCCACGGCGACGGCGGCGCGGCGGACAACATCGTGATCCACAAGGCGCACTTCACCAAGGACTTCATCGCCGGCCTCCGCGCGGCGGCGTCGGAGGGGCGCGGCCGGCCGTTCAGCCGGTTCGAGACCATCCTCGCCCACCTATGGCGCACTATGACGCGCGCCCGCGGGCTCAGCCCCGACGAGGCCTCCACCATCCGCCTCTCCGTCGACGGCCGCCACCGCCTCGGCGCGCCGGCGGAGTACTTCGGCAACCTCGTCCTCTGGGCGTTCCCGCGCGCCACCGTCGGCGACCTCCTCACCCGGCCGCTCAAGCACGCCGCGCAGGTGATCCACGACGAGGTGGCGCGCGTCGACGGCGCCTACTTCCGCTCCTTCCTCGACTTCGCCCTCTCCGGCGCCGGCGGCGACAAGGAGGGGCTCGCGCCGAGCGCCGTGCTCAAGGACGTGCTGTGCCCGAACGCCGAGGTGGACAGCTGGCTCACCTTCCCGTTCTACGAGCTCGACTTCGGCACCGGCAGCCCGACCTACTTCATGCCGTCGTACTTTCCGACGGAGGGGATGCTGTTCCTGGTGCCGTCGTACCTCGGCGACGGCAGCGTCGACGCCTTCGTCCCCGTCTTCAACCACAACCTCGAGGCATTCAAGGAGTGCTGCTACTCCATGGAGTAA
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| Protein seq | MEVKVLSSKLVKPAYNGGVAAAPDVEYIPLSIFDKVTYKMQMAIIYAFPPPAPSTAAIEKGLAAVLAQYRAFAGQLGESPDGEAAVVLNDRGARLVEAAVDADLVDMAPAKPTPELLRLHPDLEGELQEVVLLQLTRFRCGSLAVGFTSNHVVADGHATSNFLVAWGRATRGLPMGAPPVHHHAALFKPRPSPHVEHDHRNREYYLPAAGDDSHGHGDGGAADNIVIHKAHFTKDFIAGLRAAASEGRGRPFSRFETILAHLWRTMTRARGLSPDEASTIRLSVDGRHRLGAPAEYFGNLVLWAFPRATVGDLLTRPLKHAAQVIHDEVARVDGAYFRSFLDFALSGAGGDKEGLAPSAVLKDVLCPNAEVDSWLTFPFYELDFGTGSPTYFMPSYFPTEGMLFLVPSYLGDGSVDAFVPVFNHNLEAFKECCYSME |
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| Function | Putrescine hydroxycinnamoyltransferase 3 [UniProtKB/Swiss-Prot:Q7XXN5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os09g0543900 | Os09t0543900-01 | Chr09 | 21450584 | 21452639 | + | irgsp1_rep | ||
| CDS seq | ATGGAGGTCAAGGTATTGAGCAGCAAGCTCGTCAAGCCCGCCTACAATGGCGGTGTCGCCGCGGCCCCCGACGTGGAGTATATTCCTTTGTCGATCTTCGACAAGGTGACGTACAAGATGCAGATGGCGATCATCTACGCGTTCCCGCCGCCGGCGCCGTCGACGGCGGCCATCGAGAAGGGGCTCGCGGCGGTGCTCGCGCAGTACCGCGCGTTCGCGGGGCAGCTCGGGGAGTCGCCCGACGGCGAGGCGGCGGTGGTGCTGAACGACCGCGGCGCGCGGCTGGTGGAGGCGGCGGTGGACGCCGACCTCGTGGACATGGCGCCGGCGAAGCCCACGCCGGAGCTGCTCCGGCTGCACCCGGACCTGGAGGGGGAGCTCCAGGAGGTGGTGCTGCTCCAGCTGACGCGGTTCAGGTGCGGCTCCCTCGCCGTCGGGTTCACCTCCAACCACGTCGTCGCCGACGGCCACGCCACCAGCAACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGGCTCCCCATGGGCGCCCCGCCCGTGCACCACCACGCCGCCCTCTTCAAGCCCCGCCCCTCGCCGCACGTCGAGCACGACCACCGCAACAGAGAGTACTACCTCCCCGCCGCCGGCGACGACAGCCACGGCCACGGCGACGGCGGCGCGGCGGACAACATCGTGATCCACAAGGCGCACTTCACCAAGGACTTCATCGCCGGCCTCCGCGCGGCGGCGTCGGAGGGGCGCGGCCGGCCGTTCAGCCGGTTCGAGACCATCCTCGCCCACCTATGGCGCACTATGACGCGCGCCCGCGGGCTCAGCCCCGACGAGGCCTCCACCATCCGCCTCTCCGTCGACGGCCGCCACCGCCTCGGCGCGCCGGCGGAGTACTTCGGCAACCTCGTCCTCTGGGCGTTCCCGCGCGCCACCGTCGGCGACCTCCTCACCCGGCCGCTCAAGCACGCCGCGCAGGTGATCCACGACGAGGTGGCGCGCGTCGACGGCGCCTACTTCCGCTCCTTCCTCGACTTCGCCCTCTCCGGCGCCGGCGGCGACAAGGAGGGGCTCGCGCCGAGCGCCGTGCTCAAGGACGTGCTGTGCCCGAACGCCGAGGTGGACAGCTGGCTCACCTTCCCGTTCTACGAGCTCGACTTCGGCACCGGCAGCCCGACCTACTTCATGCCGTCGTACTTTCCGACGGAGGGGATGCTGTTCCTGGTGCCGTCGTACCTCGGCGACGGCAGCGTCGACGCCTTCGTCCCCGTCTTCAACCACAACCTCGAGGCATTCAAGGAGTGCTGCTACTCCATGGAGTAA
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| Protein seq | MEVKVLSSKLVKPAYNGGVAAAPDVEYIPLSIFDKVTYKMQMAIIYAFPPPAPSTAAIEKGLAAVLAQYRAFAGQLGESPDGEAAVVLNDRGARLVEAAVDADLVDMAPAKPTPELLRLHPDLEGELQEVVLLQLTRFRCGSLAVGFTSNHVVADGHATSNFLVAWGRATRGLPMGAPPVHHHAALFKPRPSPHVEHDHRNREYYLPAAGDDSHGHGDGGAADNIVIHKAHFTKDFIAGLRAAASEGRGRPFSRFETILAHLWRTMTRARGLSPDEASTIRLSVDGRHRLGAPAEYFGNLVLWAFPRATVGDLLTRPLKHAAQVIHDEVARVDGAYFRSFLDFALSGAGGDKEGLAPSAVLKDVLCPNAEVDSWLTFPFYELDFGTGSPTYFMPSYFPTEGMLFLVPSYLGDGSVDAFVPVFNHNLEAFKECCYSME
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os09g0543900 | Os09t0543900-02 | Chr09 | 21450712 | 21452128 | + | irgsp1_rep | ||
| CDS seq | ATGGAGGTCAAGGTATTGAGCAGCAAGCTCGTCAAGCCCGCCTACAATGGCGGTGTCGCCGCGGCCCCCGACGTGGAGTATATTCCTTTGTCGATCTTCGACAAGGTGACGTACAAGATGCAGATGGCGATCATCTACGCGTTCCCGCCGCCGGCGCCGTCGACGGCGGCCATCGAGAAGGGGCTCGCGGCGGTGCTCGCGCAGTACCGCGCGTTCGCGGGGCAGCTCGGGGAGTCGCCCGACGGCGAGGCGGCGGTGGTGCTGAACGACCGCGGCGCGCGGCTGGTGGAGGCGGCGGTGGACGCCGACCTCGTGGACATGGCGCCGGCGAAGCCCACGCCGGAGCTGCTCCGGCTGCACCCGGACCTGGAGGGGGAGCTCCAGGAGGTGGTGCTGCTCCAGCTGACGCGGTTCAGGTGCGGCTCCCTCGCCGTCGGGTTCACCTCCAACCACGTCGTCGCCGACGGCCACGCCACCAGCAACTTCCTCGTGGCGTGGGGGCGCGCCACCAGGGGGCTCCCCATGGGCGCCCCGCCCGTGCACCACCACGCCGCCCTCTTCAAGCCCCGCCCCTCGCCGCACGTCGAGCACGACCACCGCAACAGAGAGTACTACCTCCCCGCCGCCGGCGACGACAGCCACGGCCACGGCGACGGCGGCGCGGCGGACAACATCGTGATCCACAAGGCGCACTTCACCAAGGACTTCATCGCCGGCCTCCGCGCGGCGGCGTCGGAGGGGCGCGGCCGGCCGTTCAGCCGGTTCGAGACCATCCTCGCCCACCTATGGCGCACTATGACGCGCGCCCGCGGGCTCAGCCCCGACGAGGCCTCCACCATCCGCCTCTCCGTCGACGGCCGCCACCGCCTCGGCGCGCCGGCGGAGTACTTCGGCAACCTCGTCCTCTGGGCGTTCCCGCGCGCCACCGTCGGCGACCTCCTCACCCGGCCGCTCAAGCACGCCGCGCAGGTGATCCACGACGAGGTGGCGCGCGTCGACGGCGCCTACTTCCGCTCCTTCCTCGACTTCGCCCTCTCCGGCGCCGGCGGCGACAAGGAGGGGCTCGCGCCGAGCGCCGTGCTCAAGGACGTGCTGTGCCCGAACGCCGAGGTGGACAGCTGGCTCACCTTCCCGTTCTACGAGCTCGACTTCGGCACCGGCAGCCCGACCTACTTCATGCCGTCGTACTTTCCGACGGAGGGGATGCTGTTCCTGGTGCCGTCGTACCTCGGCGACGGCAGCGTCGACGCCTTCGTCCCCGTCTTCAACCACAACCTCGAGGCATTCAAGGAGTGCTGCTACTCCATGGAGTAA
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| Protein seq | MEVKVLSSKLVKPAYNGGVAAAPDVEYIPLSIFDKVTYKMQMAIIYAFPPPAPSTAAIEKGLAAVLAQYRAFAGQLGESPDGEAAVVLNDRGARLVEAAVDADLVDMAPAKPTPELLRLHPDLEGELQEVVLLQLTRFRCGSLAVGFTSNHVVADGHATSNFLVAWGRATRGLPMGAPPVHHHAALFKPRPSPHVEHDHRNREYYLPAAGDDSHGHGDGGAADNIVIHKAHFTKDFIAGLRAAASEGRGRPFSRFETILAHLWRTMTRARGLSPDEASTIRLSVDGRHRLGAPAEYFGNLVLWAFPRATVGDLLTRPLKHAAQVIHDEVARVDGAYFRSFLDFALSGAGGDKEGLAPSAVLKDVLCPNAEVDSWLTFPFYELDFGTGSPTYFMPSYFPTEGMLFLVPSYLGDGSVDAFVPVFNHNLEAFKECCYSME
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0543900 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g37180 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0018380 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0018450 | RBH | 0.0 | 0.517021 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0018670 | RBH | 0.0 | 1.071854 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0018430 | RBH | 0.0 | 0.123483 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0018630 | RBH | 0.0 | 16.577513 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0360600 | RBH | 0.1779265 | 5.332583 | 0.071798 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0018380 | RBH | 0.0 | 0.231087 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0348100 | RBH | 0.5483945 | 8.0189235 | 0.024104 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0018510 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0018260 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0018250 | RBH | 0.0 | 9.026676 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0018240 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0018380 | RBH | 0.0 | 2.655631 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G018770 | RBH | 0.0 | 3.204240 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0018630 | RBH | 0.0 | 0.0 | 0.0 |
