Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os09g0339300 | OGI:09031380 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr09:10378522-10381850 | ||||||||
| Gene Symbol | WAK86, OsWAK86 | ||||||||||
| DNA seq | ACAGCAGCATCTATTTTTCCATACTGTACTGTATGCTTGATTCCTCCATGTCCCCTGTCGCTATCATGCGATGCTCTGCCATCTGAGATACAAGGCTACTTGATGCTGTATCATGTGAAGCAAGTTTCTTACTAACTCGCAAGTTTTCCAGTCCCATCTCGACTTCTCTCATAGTAGGGCGATCTTGTCCAGTCATTCTAGTGCACATCCCAGCAAGTAATGCTACTTCCATGACTTCTCCACCTCCCTCGGTCAGGACTTGAGGATCCAGTATCCCAACCAGCTGTCCTTGTCTCAGTAGTGATGCAAAATGCAAAACTAAACTATCACCCTGATCAGTCCTATAGGTGGGTCTTTTCCGAGTAAGAAGTTCTATTACAAGAACTCCAAAGCTAAAAACGTCACTTTTGTCCATTAAATGGCCTGTATAATAATACTCGGGATCTAAGTAACCGATCGTTCCCTGGACAGCATTAGTCACTTCAGTTTGATTGATAGGGACATATCGTGAAGCTCCAAAGTCCGATACCTTTGCTATTAACTAATTGTCAAGAAGTATGTTGCATGCCTTAATGTCCCTATGGAATACCGGTACTGTAGCAGCTGAATGCAAATAAGTTAAAGCTCTAGCAACTTCAACAGCTATCCTCATTCGGTCCTTCCATGAAAGCGAAATTGGTTCATCAACATGAAAATGTTGATCTAGGGATCCATTTGAAATAAATTCATAGACTAATAATGGAACTTCGGTCTCTAGGCAACATCCTATAAGCTTGACTACGTTTCTATGGTTGATTTGAGAGAGAATTGCCACTTCATTTATGAAATCGTTTATTTCTCTTTCTACTATGATCATCGACTTCTTAATGGCAACAACCTCCAAGTTTAATATTCCCTTGTATACGATCCCATGTCCTCCACCACCAACCTCGCGAGTTCTATCAAAATTATTTGTGGCCTTTTCTAGCACTGGTAATGTTAGGATCATCCTCTCACTAATGTGCGCATTTTGTGAGATCAGTCGCTGTAATAGCAACCCGTGGTTTTGGTTGAAAAATGTCTGTCTCATCCTTTTCAGCTTGCGTACCTTCATTTTCCTTGATAGGAAGGGAGCACCAACTGCAATGAGCAAAAGAATTGTGCCACTGCCAACCCCAAGCCCAATGAATAGACCTAAGTCTCGAGCTAGCAAACAAGTTAAGGAAACTATCAACAATGATTATCAATGAAGATTTTAACGGTGAGTATAGAAATGCTACATTAATCATATATTACGATTTTGTATATCTCTTATTACCTGACAAATGATGCTTCACCGGAAGGCATCCCCCTTCTTTTCTGGGATCCCCGTCAGTTCCATGGTAGCAGAGGCAATCGAAACCTCCAGGGAAATTAATGCACTCTCCATAGCACTGGTAAGTTTCGCGGTGCCCACACTCATCGATGTCTGGTTAATTGTATACAGCATGGAAAGATCAATAAGATCACATGCTAGAAAAGTATATGTATTTTCCTATTAGTTAATTTGCTTTTCTTGTTGTGAGCTGTGTAAATTAGGGAATAATTAATAATATGTAAAAACACCGCGGGTGCCTATATTGCCGAAACACGCAGTAATTAATTTTCCAACAAGCTAGCTACTTCCTCCATTTCACAATGTAAGTCATTCTAGCATTTTCCACATTCATATTGATCTTAATGAATCTAGATAGATATATATGTCTAAATTCATTAACAACAATATGAACATGGAAAATGTTAGAATGACGGAGTAGCTTTCAGTGTGGGATCAACATAGGAAAAAACGTACATGGGAATTTTACCGTGTGCTCCCCTACAAATAATAATGACACCAGGGAGAACTTTTTAATTAGTTTTGTGCTATGTACGCGCTATTTCTTGTTTCAACACTGCAGGGGTAGCTAGTAATGAAATTAACAACCTCAATTTATTGACATATACTAATTGAGCGAACACACGTGCTGCAACGATCAACATGTGTCAGCGTAAATTAAGCAATTAATTGATAGATGGCTAGCTAGCTACAGTACGTACTAGTAACAAGTTTGTAATAGTAATTAGATATAAACCGTTGTAGTACTGGCTAGTAAGTTTATTATATACATATATATGTATTTTTAATCCGATGAACGAGAGTTAATCCATTAATTAGGTACCTTTGCATCCATTTGGTGTGGAAGCATTGCGCTCGTAGCCACGAGGACAGTCGCAAATGTGCGATCCTGGCGTGTTGTTGCAGTTGCCGTAACATGAATAATCTTGGGGGGACTTGCATTCATCGATATCTAGTAACAAAAAGACATTAATAAGTAGTATATATAAAGCGGCATGCAAACTATTACTCCTATTAATTACTAGTACTAGTACTTACCATGGCATCCACCGCGAATGTATGGATTTCCTTGGTAACCATCGGAGCAGTGGCACTTGTACCCAAGGTCGTAAGCGTGGCAGAAGCTGTTGGCGCTGAGACAATCGGGGGCTGATTCGTACGTACACTCTGATGGGTCACTGCTTATATACCAATCTAGCAGGGCTGGGAGCGCCTGTGGGATGTTGTTGCCGAAAGCCATGTCATTGGTGTAGCTGAACTCCTCTTTCGATATGAACACTAGATCCGTTGGACTGATGGAGCCTCCCAGCTCCTGCAAGTTGTGGATCTGGATTGTGTACGAAGAGGGGATGTCTAAGTTGATGTCTGCTTGGCAGCAGCCAACCCCGGAGCACGCTGCGCTGCTACCGCCAGAACCGATGGCGAAAACCGGAGTCATGTCCTCGAGGTCTAATGGGCAGACGGCAGTGCATGAGCTGATCAGATTACTTCCAGTATCGTCGTCGCCGCCGCGGCCGCCGTGTTTTACTTTTACCCGGGCGCGAAGATCAACCCTGGCATTGCAGCCTACCAGAGCTATCTTGTTTGAGCCCGATAAGGAGTAGGGGCCTCCCACCAGCTGATCCCATGTTCTGTTGAGGACGACCCGCGTCTCGGTGGAGTTGAACACCATGCCGGTGTTGTTGATCAGCGCCCACCCGTGTGGCACGGAGATGTCGAGCACCTGCACGCTGCCATCGCCGAGGAACAGCCTGGGCGACTGGTACGTGTGGTTGCAGGTGAGGTTGAAGCCGCCGCCGCGGTAGCACCCGTCCTCCACGCCGAACGGGTACTCGAAGCCGACGTTGCCGCAGCTGTTGGTGCACTTGCCGCCGCTCCTCATCCCATCATCCACAGCAGCAAACAACGGCGGCAGCAGCAGCACTAGTGCAGCCAGGCTGCTAAGGACGACGACGACGACATAGTTTCCTGGCAT
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| CDS seq | ATGCCAGGAAACTATGTCGTCGTCGTCGTCCTTAGCAGCCTGGCTGCACTAGTGCTGCTGCTGCCGCCGTTGTTTGCTGCTGTGGATGATGGGATGAGGAGCGGCGGCAAGTGCACCAACAGCTGCGGCAACGTCGGCTTCGAGTACCCGTTCGGCGTGGAGGACGGGTGCTACCGCGGCGGCGGCTTCAACCTCACCTGCAACCACACGTACCAGTCGCCCAGGCTGTTCCTCGGCGATGGCAGCGTGCAGGTGCTCGACATCTCCGTGCCACACGGGTGGGCGCTGATCAACAACACCGGCATGGTGTTCAACTCCACCGAGACGCGGGTCGTCCTCAACAGAACATGGGATCAGCTGGTGGGAGGCCCCTACTCCTTATCGGGCTCAAACAAGATAGCTCTGGTAGGCTGCAATGCCAGGGTTGATCTTCGCGCCCGGGTAAAAGTAAAACACGGCGGCCGCGGCGGCGACGACGATACTGGAAGTAATCTGATCAGCTCATGCACTGCCGTCTGCCCATTAGACCTCGAGGACATGACTCCGGTTTTCGCCATCGGTTCTGGCGGTAGCAGCGCAGCGTGCTCCGGGGTTGGCTGCTGCCAAGCAGACATCAACTTAGACATCCCCTCTTCGTACACAATCCAGATCCACAACTTGCAGGAGCTGGGAGGCTCCATCAGTCCAACGGATCTAGTGTTCATATCGAAAGAGGAGTTCAGCTACACCAATGACATGGCTTTCGGCAACAACATCCCACAGGCGCTCCCAGCCCTGCTAGATTGGTATATAAGCAGTGACCCATCAGAGTGTACGTACGAATCAGCCCCCGATTGTCTCAGCGCCAACAGCTTCTGCCACGCTTACGACCTTGGGTACAAGTGCCACTGCTCCGATGGTTACCAAGGAAATCCATACATTCGCGGTGGATGCCATGACATCGATGAGTGTGGGCACCGCGAAACTTACCAGTGCTATGGAGAGTGCATTAATTTCCCTGGAGGTTTCGATTGCCTCTGCTACCATGGAACTGACGGGGATCCCAGAAAAGAAGGGGGATGCCTTCCGGTGAAGCATCATTTGTCAGGTCTATTCATTGGGCTTGGGGTTGGCAGTGGCACAATTCTTTTGCTCATTGCAGTTGGTGCTCCCTTCCTATCAAGGAAAATGAAGGTACGCAAGCTGAAAAGGATGAGACAGACATTTTTCAACCAAAACCACGGGTTGCTATTACAGCGACTGATCTCACAAAATGCGCACATTAGTGAGAGGATGATCCTAACATTACCAGTGCTAGAAAAGGCCACAAATAATTTTGATAGAACTCGCGAGGTTGGTGGTGGAGGACATGGGATCGTATACAAGGGAATATTAAACTTGGAGGTTGTTGCCATTAAGAAGTCGATGATCATAGTAGAAAGAGAAATAAACGATTTCATAAATGAAGTGGCAATTCTCTCTCAAATCAACCATAGAAACGTAGTCAAGCTTATAGGATGTTGCCTAGAGACCGAAGTTCCATTATTAGTCTATGAATTTATTTCAAATGGATCCCTAGATCAACATTTTCATGTTGATGAACCAATTTCGCTTTCATGGAAGGACCGAATGAGGATAGCTGTTGAAGTTGCTAGAGCTTTAACTTATTTGCATTCAGCTGCTACAGTACCGGTATTCCATAGGGACATTAAGGCATGCAACATACTTCTTGACAATTAG
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| Protein seq | MPGNYVVVVVLSSLAALVLLLPPLFAAVDDGMRSGGKCTNSCGNVGFEYPFGVEDGCYRGGGFNLTCNHTYQSPRLFLGDGSVQVLDISVPHGWALINNTGMVFNSTETRVVLNRTWDQLVGGPYSLSGSNKIALVGCNARVDLRARVKVKHGGRGGDDDTGSNLISSCTAVCPLDLEDMTPVFAIGSGGSSAACSGVGCCQADINLDIPSSYTIQIHNLQELGGSISPTDLVFISKEEFSYTNDMAFGNNIPQALPALLDWYISSDPSECTYESAPDCLSANSFCHAYDLGYKCHCSDGYQGNPYIRGGCHDIDECGHRETYQCYGECINFPGGFDCLCYHGTDGDPRKEGGCLPVKHHLSGLFIGLGVGSGTILLLIAVGAPFLSRKMKVRKLKRMRQTFFNQNHGLLLQRLISQNAHISERMILTLPVLEKATNNFDRTREVGGGGHGIVYKGILNLEVVAIKKSMIIVEREINDFINEVAILSQINHRNVVKLIGCCLETEVPLLVYEFISNGSLDQHFHVDEPISLSWKDRMRIAVEVARALTYLHSAATVPVFHRDIKACNILLDN |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os09g0339300 | Os09t0339300-00 | Chr09 | 10378522 | 10381850 | - | irgsp1_rep | ||
| CDS seq | ATGCCAGGAAACTATGTCGTCGTCGTCGTCCTTAGCAGCCTGGCTGCACTAGTGCTGCTGCTGCCGCCGTTGTTTGCTGCTGTGGATGATGGGATGAGGAGCGGCGGCAAGTGCACCAACAGCTGCGGCAACGTCGGCTTCGAGTACCCGTTCGGCGTGGAGGACGGGTGCTACCGCGGCGGCGGCTTCAACCTCACCTGCAACCACACGTACCAGTCGCCCAGGCTGTTCCTCGGCGATGGCAGCGTGCAGGTGCTCGACATCTCCGTGCCACACGGGTGGGCGCTGATCAACAACACCGGCATGGTGTTCAACTCCACCGAGACGCGGGTCGTCCTCAACAGAACATGGGATCAGCTGGTGGGAGGCCCCTACTCCTTATCGGGCTCAAACAAGATAGCTCTGGTAGGCTGCAATGCCAGGGTTGATCTTCGCGCCCGGGTAAAAGTAAAACACGGCGGCCGCGGCGGCGACGACGATACTGGAAGTAATCTGATCAGCTCATGCACTGCCGTCTGCCCATTAGACCTCGAGGACATGACTCCGGTTTTCGCCATCGGTTCTGGCGGTAGCAGCGCAGCGTGCTCCGGGGTTGGCTGCTGCCAAGCAGACATCAACTTAGACATCCCCTCTTCGTACACAATCCAGATCCACAACTTGCAGGAGCTGGGAGGCTCCATCAGTCCAACGGATCTAGTGTTCATATCGAAAGAGGAGTTCAGCTACACCAATGACATGGCTTTCGGCAACAACATCCCACAGGCGCTCCCAGCCCTGCTAGATTGGTATATAAGCAGTGACCCATCAGAGTGTACGTACGAATCAGCCCCCGATTGTCTCAGCGCCAACAGCTTCTGCCACGCTTACGACCTTGGGTACAAGTGCCACTGCTCCGATGGTTACCAAGGAAATCCATACATTCGCGGTGGATGCCATGACATCGATGAGTGTGGGCACCGCGAAACTTACCAGTGCTATGGAGAGTGCATTAATTTCCCTGGAGGTTTCGATTGCCTCTGCTACCATGGAACTGACGGGGATCCCAGAAAAGAAGGGGGATGCCTTCCGGTGAAGCATCATTTGTCAGGTCTATTCATTGGGCTTGGGGTTGGCAGTGGCACAATTCTTTTGCTCATTGCAGTTGGTGCTCCCTTCCTATCAAGGAAAATGAAGGTACGCAAGCTGAAAAGGATGAGACAGACATTTTTCAACCAAAACCACGGGTTGCTATTACAGCGACTGATCTCACAAAATGCGCACATTAGTGAGAGGATGATCCTAACATTACCAGTGCTAGAAAAGGCCACAAATAATTTTGATAGAACTCGCGAGGTTGGTGGTGGAGGACATGGGATCGTATACAAGGGAATATTAAACTTGGAGGTTGTTGCCATTAAGAAGTCGATGATCATAGTAGAAAGAGAAATAAACGATTTCATAAATGAAGTGGCAATTCTCTCTCAAATCAACCATAGAAACGTAGTCAAGCTTATAGGATGTTGCCTAGAGACCGAAGTTCCATTATTAGTCTATGAATTTATTTCAAATGGATCCCTAGATCAACATTTTCATGTTGATGAACCAATTTCGCTTTCATGGAAGGACCGAATGAGGATAGCTGTTGAAGTTGCTAGAGCTTTAACTTATTTGCATTCAGCTGCTACAGTACCGGTATTCCATAGGGACATTAAGGCATGCAACATACTTCTTGACAATTAG
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| Protein seq | MPGNYVVVVVLSSLAALVLLLPPLFAAVDDGMRSGGKCTNSCGNVGFEYPFGVEDGCYRGGGFNLTCNHTYQSPRLFLGDGSVQVLDISVPHGWALINNTGMVFNSTETRVVLNRTWDQLVGGPYSLSGSNKIALVGCNARVDLRARVKVKHGGRGGDDDTGSNLISSCTAVCPLDLEDMTPVFAIGSGGSSAACSGVGCCQADINLDIPSSYTIQIHNLQELGGSISPTDLVFISKEEFSYTNDMAFGNNIPQALPALLDWYISSDPSECTYESAPDCLSANSFCHAYDLGYKCHCSDGYQGNPYIRGGCHDIDECGHRETYQCYGECINFPGGFDCLCYHGTDGDPRKEGGCLPVKHHLSGLFIGLGVGSGTILLLIAVGAPFLSRKMKVRKLKRMRQTFFNQNHGLLLQRLISQNAHISERMILTLPVLEKATNNFDRTREVGGGGHGIVYKGILNLEVVAIKKSMIIVEREINDFINEVAILSQINHRNVVKLIGCCLETEVPLLVYEFISNGSLDQHFHVDEPISLSWKDRMRIAVEVARALTYLHSAATVPVFHRDIKACNILLDN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0339300 | RBH | 0.0 | 0.0 | 0.264033 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g16980 | RBH | 0.0 | 0.0 | 0.028832 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0339000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0006350 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0006370 | RBH | 0.0 | 0.0 | 0.135646 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019990 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0006420 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0006490 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0185300 | RBH | 0 | 0 | 0.013012 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0006610 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0161000 | RBH | 0 | 0.0210515 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0006470 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0006290 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0006310 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0006230 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0006300 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G006660 | RBH | 0.000000 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0006530 | RBH | 0.0 | 0.0 | 0.0 |
