Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os08g0507000 | OGI:08072160 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr08:25104735-25105616 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AACAAACAATCAAACGGTGGCGTGCTCAACCTCCGCCGGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATCTTCGACAGCGTAATCAACAGCCGCTTGGCCGACGCCTCGACCGGAAAGCACGCCGACGCCGGCGCCGGCGACTTCCTGGACTCCCTCCTCGACCTCATGTCCGCAGGCAAGATCGCTCGCGACGACGTGACAAGCATAATGTTCGACTTGTTCGGCGCCGGGACCGACACGATCGCCATCACGGTGGAGTGGGCGATGGCGGAGCTGCTCCGCAACCCGAGCGTAATGACCAAGGCGCGCGCCGAGATGAACCACGCCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACGTGGAGAAGCTGCCGTACCTCCAGGCCGTGCTGAGGGAGGCGATGCGCCTGCACCCGGCGGCGCCGATCCTCGTGCCGCACCGGGCGGAGGAGGACGGCGCGGAGATCGGGGGCTACGCCGTGCCCAAGGGCTCGACGGTGATCTTCAACGTGTGGGCGATCATGCGTGACCCGGCGGCGTGGGAGAGGCCCGAGGAGTTCATGCCAGAGAGGTTCATGGACATGGCGGAGGAGGTGGATTTCAGGGGAAAAGACTACAAGTTCATCCCGTTTTGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCTGATGGCAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCACTCGTTCGAGTGGAGGCTCCCTGGCGGTATGACAGCCGAGTCTTTGGATCTTAGCGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCTATACTTGCCTCTAAAAATGAAAATATTAGGGAATGA
More
|
||||||||||
| CDS seq | AACAAACAATCAAACGGTGGCGTGCTCAACCTCCGCCGGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATCTTCGACAGCGTAATCAACAGCCGCTTGGCCGACGCCTCGACCGGAAAGCACGCCGACGCCGGCGCCGGCGACTTCCTGGACTCCCTCCTCGACCTCATGTCCGCAGGCAAGATCGCTCGCGACGACGTGACAAGCATAATGTTCGACTTGTTCGGCGCCGGGACCGACACGATCGCCATCACGGTGGAGTGGGCGATGGCGGAGCTGCTCCGCAACCCGAGCGTAATGACCAAGGCGCGCGCCGAGATGAACCACGCCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACGTGGAGAAGCTGCCGTACCTCCAGGCCGTGCTGAGGGAGGCGATGCGCCTGCACCCGGCGGCGCCGATCCTCGTGCCGCACCGGGCGGAGGAGGACGGCGCGGAGATCGGGGGCTACGCCGTGCCCAAGGGCTCGACGGTGATCTTCAACGTGTGGGCGATCATGCGTGACCCGGCGGCGTGGGAGAGGCCCGAGGAGTTCATGCCAGAGAGGTTCATGGACATGGCGGAGGAGGTGGATTTCAGGGGAAAAGACTACAAGTTCATCCCGTTTTGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCTGATGGCAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCACTCGTTCGAGTGGAGGCTCCCTGGCGGTATGACAGCCGAGTCTTTGGATCTTAGCGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCTATACTTGCCTCTAAAAATGAAAATATTAGGGAATGA
More
|
||||||||||
| Protein seq | NKQSNGGVLNLRRLDLQGWRRWAEKRYDKVFGIFDSVINSRLADASTGKHADAGAGDFLDSLLDLMSAGKIARDDVTSIMFDLFGAGTDTIAITVEWAMAELLRNPSVMTKARAEMNHALAGKKTIEENDVEKLPYLQAVLREAMRLHPAAPILVPHRAEEDGAEIGGYAVPKGSTVIFNVWAIMRDPAAWERPEEFMPERFMDMAEEVDFRGKDYKFIPFWAGRRLCPGLLMAERVVPFILASLLHSFEWRLPGGMTAESLDLSEKFTTVNVLVTPLKAIPILASKNENIRE |
||||||||||
| Function | Cytochrome P450 76M5 [UniProtKB/Swiss-Prot:Q6YTF5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os08g0507000 | Os08t0507000-00 | Chr08 | 25104735 | 25105616 | + | irgsp1_rep | ||
| CDS seq | AACAAACAATCAAACGGTGGCGTGCTCAACCTCCGCCGGCTCGACCTGCAGGGATGGCGTCGCTGGGCGGAGAAGCGCTACGACAAGGTGTTCGGCATCTTCGACAGCGTAATCAACAGCCGCTTGGCCGACGCCTCGACCGGAAAGCACGCCGACGCCGGCGCCGGCGACTTCCTGGACTCCCTCCTCGACCTCATGTCCGCAGGCAAGATCGCTCGCGACGACGTGACAAGCATAATGTTCGACTTGTTCGGCGCCGGGACCGACACGATCGCCATCACGGTGGAGTGGGCGATGGCGGAGCTGCTCCGCAACCCGAGCGTAATGACCAAGGCGCGCGCCGAGATGAACCACGCCCTCGCCGGCAAGAAAACCATCGAGGAGAACGACGTGGAGAAGCTGCCGTACCTCCAGGCCGTGCTGAGGGAGGCGATGCGCCTGCACCCGGCGGCGCCGATCCTCGTGCCGCACCGGGCGGAGGAGGACGGCGCGGAGATCGGGGGCTACGCCGTGCCCAAGGGCTCGACGGTGATCTTCAACGTGTGGGCGATCATGCGTGACCCGGCGGCGTGGGAGAGGCCCGAGGAGTTCATGCCAGAGAGGTTCATGGACATGGCGGAGGAGGTGGATTTCAGGGGAAAAGACTACAAGTTCATCCCGTTTTGGGCCGGAAGGAGGCTGTGCCCGGGGTTGCTGATGGCAGAGCGCGTCGTGCCATTCATTTTGGCGTCGCTGCTTCACTCGTTCGAGTGGAGGCTCCCTGGCGGTATGACAGCCGAGTCTTTGGATCTTAGCGAGAAGTTTACTACTGTCAATGTTCTTGTTACTCCACTCAAGGCCATCCCTATACTTGCCTCTAAAAATGAAAATATTAGGGAATGA
More
|
|||||||
| Protein seq | NKQSNGGVLNLRRLDLQGWRRWAEKRYDKVFGIFDSVINSRLADASTGKHADAGAGDFLDSLLDLMSAGKIARDDVTSIMFDLFGAGTDTIAITVEWAMAELLRNPSVMTKARAEMNHALAGKKTIEENDVEKLPYLQAVLREAMRLHPAAPILVPHRAEEDGAEIGGYAVPKGSTVIFNVWAIMRDPAAWERPEEFMPERFMDMAEEVDFRGKDYKFIPFWAGRRLCPGLLMAERVVPFILASLLHSFEWRLPGGMTAESLDLSEKFTTVNVLVTPLKAIPILASKNENIRE
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0507000 | RBH | 0.069202 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39640 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0507702 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0021500 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021400 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0021280 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021470 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021330 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0399900 | RBH | 0.00864 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021220 | RBH | 0.417651 | 0.088863 | 0.272667 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0420300 | RBH | 12.6577505 | 0.0628255 | 0.0413735 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0020550 | RBH | 0.934991 | 0.072760 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0020880 | SBH | 1.006850 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0020670 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0021510 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0020890 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021080 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021260 | SBH | 0.0 | 0.000000 | 0.0 |
