Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os08g0446200 | OGI:08063590 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr08:21756526-21762118 | ||||||||
| Gene Symbol | PEPR1, OsPEPR1 | ||||||||||
| DNA seq | CAGTATAAATAAGGCACAGAAGAACTATCAATTCTTGTAAGTTATACACCAGTCAAGGCTACATTCAGTAATCAGTTACACTTGCACACAGATCATTTACACTACACAAAAAATGGTTAGGAATGAACTGTTCCAATCAATCCCATATCGAATTGCCACTTTTCCAGCCCCCCATTCTAACCAACCGTGTACTAGTGCTAAACACAACCGGGGTTACAAACATTTTACATTTTACACAGCTAAACTGCACCAGAGTACCAGGCTATCTGAGTCCTGAGGGGCTGAACGGCTAGGTTATACCATGAATTCTATTGTCAGGACGAGCTCCGGGAGGCCGTCTTCTCCGGCTTGGACAACTTCCCGGCGGATTTCCTGACATCAGTCAGCTCCTTCACAACATCGGCCATGGGCGGCCTTCGGCTCGCTTCCTTCGCTGCGCACCTAAGAGCCAAGGACAGGACCTTGCTGACTTCCTCTATTTCCACCGTGCCATAGACTTCCTCCATCAGCGTCGAGTCGCAGACGAGTTCGATTTGGTCGGTGCCGTTGAGCGTTGCGGTCACCCAACCGACAATGTCCATGTTGTCGGGGAACGAGGGATCCACCACCTGTTTTTTTGTTAGCAGCTCAAGGAGTATGACGCCGTAGCTGTATACATCGGACTCGATACTACTCCTGGTGGAAAATGCCAACTCTGCAAGGAACAACAGTACAGCACAGCCCATAAAAATCTGTAACATGAATATAGAATTGATAGTTTCAGGGTTATCCTCAGCAAAACAGTAAGACGGCAATATATAATTAAACAATTTTGTAGTCGCTGATTATTTTGTTGTTTTGGCTTTCCAATAGTATTGTCAAAGTTAGCAAAAAAATTCTACAGTTATTTTATTATTCTATATTTCAGGGACTAAGTATTCAGTGTTGTCACTTTCATTTTCCACCTACAGGTTCTCGATGGCATTTTACAAGTTAGAAATAAGGGTGGGTGCAGTTACTGCCATGTATAATTGGATTGAAACTGCAGAAAATTTATGAAACATCGACATTTCAACAAGTTGCTTCAGATTATGCATGCTAATGTGGGAAAAAAACAGACATGGAATACTTTATTTCAAGCATACCTGGGGCCATATATCCAAAGGTGCCAATAACTCCAGTAGTCTGTGGAGCAGAAGAAGACTGGTCCATGAGCTTTGCAATGCCAAAATCTGCTATATGTGGAACCATGTCCCCATTCAGAAGTATATTACTGGGCTTAATATCTCGGTGAATAATTGCAGGTTGACAGTCATCATGAAGATACGCTAGCCCATGGGCAGTACCAAGAGCTATGGTATAGCGCACACTCCAGTCCAAACTTGGAGGAGGTTGGATCCCATGCAGAACATCTTGAAGGCTACCTTGCTCCATATAAACATAAAGCATGAACCCATACTCACTTCTTAACCAAAACTCTTTCAGCTTTATCAAGTTCCGATGCTTGATTTTGCCTAATGTCTTCAGTTCTCTGATCATGCTTTTGTACGAACCTTTCTGTGCAGATATTGCAAGCTTCTTTACAGCATATACTTCTCCTGACCTCAGTGTTGCCTTGTAAACAGTTCCATGAGCACCAGTACCGATGATATACTTGTCATCAAAGTTTTCAGTAGCCTCTATAACCTCATTTAATTTAGAAGAAGAACCTTCAAACAGAGTACTGACTGATTCTAAATTTTTTGTCTTTGGATGATAAAACTTTAAAAGGATGCAACTCAGTATAAGTATGGAAACTGCTCCAACGAACAATGAACCAATAACTATAACAGCAATCTTGACGTGTTTGTGTAGTTTTTTGGTCTCTCCACAAGGTTTCAAAACATTAGACCCCTTGCAATAAGAACCATTGGTATGGCAAGAGATACAGAGGTCTGGATTGCCATTAAAGGAGCTCGGTGAGGAAACCAGAAAATTCAGAAGATTTTCTGGGACCGGACCACTGAATCTATTGTAGGAAACATTCAATACATGCAGTAATTGTAAGTTTCCTAACATGTCTAGGTCTCCAGTGAGGCCATTAAGTGACAAATCTAAACTTTGCAGCTCCACCAAATTGCTCAATAATGGCGGAATGCCACCAACGAGTCCATTGCTACAAATATTCAATGCAATGCCCAGTTTTACCAACCTTCCTAACGATGAAGGGATACTGCCCCCAAGAACGTTGCCACCAAGTTGCAGCTCAATAAGCATATCCAACTGCGAGAGGGAATCAGGTATGCCTCCACTGAATTTATTCTCTTGTAACCGTAGTTGTGACAGAAACTTAAGGTTGCTTACGGTTGTGAGTGCCGAACCATTCAAAGAGTTGAAACTCAAGTCAAGCAAGTACAGCTTGGAGCAACTAGAAATCTGCACTGGAAGAACACCTTGCAGGCTGTTTTGCGAGAGGTTTAGCACTCTCAAATTCACCAAGTCTCTAATTTCAGATGGTATTGGACCAACCAACTTGTTTTCTGACCATTTTATCATCGTAATATTTACACATCTCCCCAAGCTTGCTGGAATGTTGCCACTTAAGGAATTATGACTCAGATCTATATAGCTCAGATTTGCACAGTTCCTAAATTGTGGAATGGGCCCACTTAGATTGTTGTTTTGGAGAATAAATCGTTCCAAACTTGGGCAGTCCATAACATTGGATGGGATGCTACCATTGAGAAGATTAAGCCCCAAGTCCAAAATTCTCAATCTTTTCCCTGAACAAATGTTAGGCGGGATTCCACCAACAAAACTGTTGTTTGTGAAATCAATTTGGGTTAAACGACTATTAACACCCAAATCTGGTGGTATAACTCCAGTGAAGAAATTGTTGAAAAGTGTAATGTTCTTCAGGAACTTCAGCTCAGCTAGCACTGGAGGTAGCCTCCCAGTAAAACTGTTTTCATAGATAAGGACACTTTGCAGGCTCTTGATGCTCCAAATATCCTCAGGGAACTCCCCAATGAGGCGGTTTTCAAACAGAAAGAGTTTCTCCAATTTTCTCAGATTTGCCAGCTCTTTAGGAACAGTGCCATTGAGCTGGTTTGCATCCAACTCCAGCCACACCAGCAACTGGCAGTTACCTATCTCAGGAGGAATTGGCCCAGAAAGTGAGTTCTCAGAAAGTAAAAGTTGAGAGAGGTTTCTCAATAAACCCAGAGACGATGGAATCTGGCCAGATATATTATTGTTGACAAATGCAAGCTGTGTCAAGCTACTACAATTCCCTAGCCATGATGGAATTTCGTTGCTAATCTGATTGAATGACAATATGAATACCTCAAGCTTGCAATCCTCAAAACTAAATGTGATCTCACCTGTGAAACTATTTGCGGTAATATCGAAAATCTTCAGTCCTTTGATATAGCTCAAGGTTTTCGGAAGACTCCCACTCAATTGATTATCTAGTAGATAGAGCTCCTCCAACTTGGTGCAGTTGCCAATTGAATCTGGTAGAACTCCAGATAATTTATTGCCATGCAGCCACAGGTACCTAAGGCTAGTCATTTCTCCAACTGTCAAGGGGATAGAACCACTGAGTTTATTGTAATGGAGGTACACTTGCTCCAGAAACTGATTCTTGAACAACCCCTCTGGTATTTCACCAGTGAGGGAGTTACTGTACAAAGAGAGAGACGAAAGCTTTTTGATGTCACCAAGGGATGCTGGTATCTCACCAGAAAAACTGTTACTGGACAAATCCAATTGATCAAGCATGCTACAATTGCCCAATTCTTGAGGGATTGAACCAGATATGCTGTTATTTGACAAACTGAGTACTTGTAGGCTCTTCATAAGTCCTATTTGGGGTCCAAGAGAACCAGAAACTCCAGAAGATGACAGGTCAAGAGAAACCACACTATTCTTTTTGTTGCAGGAAACCCCATCCCAATTACAAGGAGTTGTATCAGAAGCTTTCCAAGTGGAGCTTATGGAATGAGGTAATATGAGATCCCTAGACAGAGAAAGAAGGGCTAGACCATCTGAAGTCAAACTCCAAGACGATGAAACAGAAGTGAAGAAGAAGAAGAAAAACCAGTGCCACACAACCAGCCTCATTTTGTGCCTGAAAAACATTGAACGGCAGTCAGCAGAAGCTTATTAGATCTCTACTTCATGTGGGAAAAAAAGGCGGTTCCTAGAATTGTCTCATGAATGCATACTCCATCTTGAGTACCAAATAACAAACTTTTCTGTAATCATTTGTCAAACAGCACAATTTTAGAAGGAAGTAGCTTGTGCGAAACTGCAACAGCGACCCATGCAGTTGAGTGGTATGGGCTAGTACAGTAGTACACTAATACTACTATGTACTAGTATTATTAAAATTTTTGAGAACCAATACTTAATGAGACTTGCTGGTATGGTTTTACAGTTTTCTTATCTTTTCAGTATATTTTCTTATCTTTTGAGTATAAAAATGTTTTAAATAATAAACCATACCTGATTGGTTATGCTTTTCTAGTCATAATTAAGGGTCACCATATTGATGTCCAAATGTCTTTTTTTTCCAAATTAATCAAAGATATATTAGAGCTTCTACATATGTACGGGAAATATACATAAACATTAAAGTAGCATAACCATACAATTGCTAGCATAATTTCATACATAAGCATTAATGTATCTCCGGCCCAGGCCACCAAATTCTACCAAGAGAAAACCAATTGGTATTTTACATAATCAAATGCAAATATGTCTACTACTAGATCTTTTACAGAAAAAGAGAAAAAAAAAGTCAACCGGAGTCTGCTTTTTCTCCTCTCCAAGTAAACCCGAGAATGTTCAACAAGTCCAAAAAGAAGTTTTTTTTACTCCTTTGGTTCAGAAAAATCACCACTAATCTTCACAACAGTTGCGAAGAGTTAAACCATGAAAGGGATGCCCCAAAGCCACCCCAACCCGGATCTCAGCCTTGGGGGAGGAACGAACATGCTAAAGCACATCTCTTCCGATTTCCCCAGCAAAAACAGTTGAATTCGATATCTTCCTCAACCCCCCCATGTTCCATTAGTACTAAGATTTGGGCCAGGAGGCGGTGGAACTTCATATGCATCTGCGAGGAAATCCCCACAATGCTACCAATAGCACAGCAAATTTGCAAGAATGGTACCTAATAAAGCTTTTTTTGTTTGTTTGTTTGTTTGTTTCAACTTTCAAGCATGAAGAGCACCAAATTTTGCTCCTCCATTGGGGACATAACTGATTACCCTACAACCTACCGAATCAGCATCAAGAACCAAGAAACCCAGCAACTAAGCGCAATGCAAGAAAGTAATATGAAAGAACAGAATCATATCCTGAGAAAGAACTCTGTCATGAAGCATCTATACGCACGAATCAAGCTAGCAGTTCCAGACGAAAGCAAACAAACGATATAACAACAAGAACACCGGCCCAAAAGAGAGCAGATATAACTGTAACCATAAACGAGCAAGAAGAAGAGCGTACGAACCAGAATAAGGCGAAGATTGAGGCGAGCACTGCTCTAATGGCAGAGTTGGCCGTCCATGGCGGAAGAAACGGCAGCACACGGGAGTACGGGAGGGATGAAGCCGCGATAGCACCC
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| CDS seq | ATGAGGCTGGTTGTGTGGCACTGGTTTTTCTTCTTCTTCTTCACTTCTGTTTCATCGTCTTGGAGTTTGACTTCAGATGGTCTAGCCCTTCTTTCTCTGTCTAGGGATCTCATATTACCTCATTCCATAAGCTCCACTTGGAAAGCTTCTGATACAACTCCTTGTAATTGGGATGGGGTTTCCTGCAACAAAAAGAATAGTGTGGTTTCTCTTGACCTGTCATCTTCTGGAGTTTCTGGTTCTCTTGGACCCCAAATAGGACTTATGAAGAGCCTACAAGTACTCAGTTTGTCAAATAACAGCATATCTGGTTCAATCCCTCAAGAATTGGGCAATTGTAGCATGCTTGATCAATTGGATTTGTCCAGTAACAGTTTTTCTGGTGAGATACCAGCATCCCTTGGTGACATCAAAAAGCTTTCGTCTCTCTCTTTGTACAGTAACTCCCTCACTGGTGAAATACCAGAGGGGTTGTTCAAGAATCAGTTTCTGGAGCAAGTGTACCTCCATTACAATAAACTCAGTGGTTCTATCCCCTTGACAGTTGGAGAAATGACTAGCCTTAGGTACCTGTGGCTGCATGGCAATAAATTATCTGGAGTTCTACCAGATTCAATTGGCAACTGCACCAAGTTGGAGGAGCTCTATCTACTAGATAATCAATTGAGTGGGAGTCTTCCGAAAACCTTGAGCTATATCAAAGGACTGAAGATTTTCGATATTACCGCAAATAGTTTCACAGGTGAGATCACATTTAGTTTTGAGGATTGCAAGCTTGAGGTATTCATATTGTCATTCAATCAGATTAGCAACGAAATTCCATCATGGCTAGGGAATTGTAGTAGCTTGACACAGCTTGCATTTGTCAACAATAATATATCTGGCCAGATTCCATCGTCTCTGGGTTTATTGAGAAACCTCTCTCAACTTTTACTTTCTGAGAACTCACTTTCTGGGCCAATTCCTCCTGAGATAGGTAACTGCCAGTTGCTGGTGTGGCTGGAGTTGGATGCAAACCAGCTCAATGGCACTGTTCCTAAAGAGCTGGCAAATCTGAGAAAATTGGAGAAACTCTTTCTGTTTGAAAACCGCCTCATTGGGGAGTTCCCTGAGGATATTTGGAGCATCAAGAGCCTGCAAAGTGTCCTTATCTATGAAAACAGTTTTACTGGGAGGCTACCTCCAGTGCTAGCTGAGCTGAAGTTCCTGAAGAACATTACACTTTTCAACAATTTCTTCACTGGAGTTATACCACCAGATTTGGGTGTTAATAGTCGTTTAACCCAAATTGATTTCACAAACAACAGTTTTGTTGGTGGAATCCCGCCTAACATTTGTTCAGGGAAAAGATTGAGAATTTTGGACTTGGGGCTTAATCTTCTCAATGGTAGCATCCCATCCAATGTTATGGACTGCCCAAGTTTGGAACGATTTATTCTCCAAAACAACAATCTAAGTGGGCCCATTCCACAATTTAGGAACTGTGCAAATCTGAGCTATATAGATCTGAGTCATAATTCCTTAAGTGGCAACATTCCAGCAAGCTTGGGGAGATGTGTAAATATTACGATGATAAAATGGTCAGAAAACAAGTTGGTTGGTCCAATACCATCTGAAATTAGAGACTTGGTGAATTTGAGAGTGCTAAACCTCTCGCAAAACAGCCTGCAAGGTGTTCTTCCAGTGCAGATTTCTAGTTGCTCCAAGCTGTACTTGCTTGACTTGAGTTTCAACTCTTTGAATGGTTCGGCACTCACAACCGTAAGCAACCTTAAGTTTCTGTCACAACTACGGTTACAAGAGAATAAATTCAGTGGAGGCATACCTGATTCCCTCTCGCAGTTGGATATGCTTATTGAGCTGCAACTTGGTGGCAACGTTCTTGGGGGCAGTATCCCTTCATCGTTAGGAAGGTTGGTAAAACTGGGCATTGCATTGAATATTTGTAGCAATGGACTCGTTGGTGGCATTCCGCCATTATTGAGCAATTTGGTGGAGCTGCAAAGTTTAGATTTGTCACTTAATGGCCTCACTGGAGACCTAGACATGTTAGGAAACTTACAATTACTGCATGTATTGAATGTTTCCTACAATAGATTCAGTGGTCCGGTCCCAGAAAATCTTCTGAATTTTCTGGTTTCCTCACCGAGCTCCTTTAATGGCAATCCAGACCTCTGTATCTCTTGCCATACCAATGGTTCTTATTGCAAGGGGTCTAATGTTTTGAAACCTTGTGGAGAGACCAAAAAACTACACAAACACGTCAAGATTGCTGTTATAGTTATTGGTTCATTGTTCGTTGGAGCAGTTTCCATACTTATACTGAGTTGCATCCTTTTAAAGTTTTATCATCCAAAGACAAAAAATTTAGAATCAGTCAGTACTCTGTTTGAAGGTTCTTCTTCTAAATTAAATGAGGTTATAGAGGCTACTGAAAACTTTGATGACAAGTATATCATCGGTACTGGTGCTCATGGAACTGTTTACAAGGCAACACTGAGGTCAGGAGAAGTATATGCTGTAAAGAAGCTTGCAATATCTGCACAGAAAGGTTCGTACAAAAGCATGATCAGAGAACTGAAGACATTAGGCAAAATCAAGCATCGGAACTTGATAAAGCTGAAAGAGTTTTGGTTAAGAAGTGAGTATGGGTTCATGCTTTATGTTTATATGGAGCAAGGTAGCCTTCAAGATGTTCTGCATGGGATCCAACCTCCTCCAAGTTTGGACTGGAGTGTGCGCTATACCATAGCTCTTGGTACTGCCCATGGGCTAGCGTATCTTCATGATGACTGTCAACCTGCAATTATTCACCGAGATATTAAGCCCAGTAATATACTTCTGAATGGGGACATGGTTCCACATATAGCAGATTTTGGCATTGCAAAGCTCATGGACCAGTCTTCTTCTGCTCCACAGACTACTGGAGTTATTGGCACCTTTGGATATATGGCCCCAGAGTTGGCATTTTCCACCAGGAGTAGTATCGAGTCCGATGTATACAGCTACGGCGTCATACTCCTTGAGCTGCTAACAAAAAAACAGGTGGTGGATCCCTCGTTCCCCGACAACATGGACATTGTCGGTTGGGTGACCGCAACGCTCAACGGCACCGACCAAATCGAACTCGTCTGCGACTCGACGCTGATGGAGGAAGTCTATGGCACGGTGGAAATAGAGGAAGTCAGCAAGGTCCTGTCCTTGGCTCTTAGGTGCGCAGCGAAGGAAGCGAGCCGAAGGCCGCCCATGGCCGATGTTGTGAAGGAGCTGACTGATGTCAGGAAATCCGCCGGGAAGTTGTCCAAGCCGGAGAAGACGGCCTCCCGGAGCTCGTCCTGA
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| Protein seq | MRLVVWHWFFFFFFTSVSSSWSLTSDGLALLSLSRDLILPHSISSTWKASDTTPCNWDGVSCNKKNSVVSLDLSSSGVSGSLGPQIGLMKSLQVLSLSNNSISGSIPQELGNCSMLDQLDLSSNSFSGEIPASLGDIKKLSSLSLYSNSLTGEIPEGLFKNQFLEQVYLHYNKLSGSIPLTVGEMTSLRYLWLHGNKLSGVLPDSIGNCTKLEELYLLDNQLSGSLPKTLSYIKGLKIFDITANSFTGEITFSFEDCKLEVFILSFNQISNEIPSWLGNCSSLTQLAFVNNNISGQIPSSLGLLRNLSQLLLSENSLSGPIPPEIGNCQLLVWLELDANQLNGTVPKELANLRKLEKLFLFENRLIGEFPEDIWSIKSLQSVLIYENSFTGRLPPVLAELKFLKNITLFNNFFTGVIPPDLGVNSRLTQIDFTNNSFVGGIPPNICSGKRLRILDLGLNLLNGSIPSNVMDCPSLERFILQNNNLSGPIPQFRNCANLSYIDLSHNSLSGNIPASLGRCVNITMIKWSENKLVGPIPSEIRDLVNLRVLNLSQNSLQGVLPVQISSCSKLYLLDLSFNSLNGSALTTVSNLKFLSQLRLQENKFSGGIPDSLSQLDMLIELQLGGNVLGGSIPSSLGRLVKLGIALNICSNGLVGGIPPLLSNLVELQSLDLSLNGLTGDLDMLGNLQLLHVLNVSYNRFSGPVPENLLNFLVSSPSSFNGNPDLCISCHTNGSYCKGSNVLKPCGETKKLHKHVKIAVIVIGSLFVGAVSILILSCILLKFYHPKTKNLESVSTLFEGSSSKLNEVIEATENFDDKYIIGTGAHGTVYKATLRSGEVYAVKKLAISAQKGSYKSMIRELKTLGKIKHRNLIKLKEFWLRSEYGFMLYVYMEQGSLQDVLHGIQPPPSLDWSVRYTIALGTAHGLAYLHDDCQPAIIHRDIKPSNILLNGDMVPHIADFGIAKLMDQSSSAPQTTGVIGTFGYMAPELAFSTRSSIESDVYSYGVILLELLTKKQVVDPSFPDNMDIVGWVTATLNGTDQIELVCDSTLMEEVYGTVEIEEVSKVLSLALRCAAKEASRRPPMADVVKELTDVRKSAGKLSKPEKTASRSSS |
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| Function | Receptor-like protein kinase [UniProtKB/Swiss-Prot:P93194] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os08g0446200 | Os08t0446200-01 | Chr08 | 21756526 | 21762118 | - | irgsp1_rep | ||
| CDS seq | ATGAGGCTGGTTGTGTGGCACTGGTTTTTCTTCTTCTTCTTCACTTCTGTTTCATCGTCTTGGAGTTTGACTTCAGATGGTCTAGCCCTTCTTTCTCTGTCTAGGGATCTCATATTACCTCATTCCATAAGCTCCACTTGGAAAGCTTCTGATACAACTCCTTGTAATTGGGATGGGGTTTCCTGCAACAAAAAGAATAGTGTGGTTTCTCTTGACCTGTCATCTTCTGGAGTTTCTGGTTCTCTTGGACCCCAAATAGGACTTATGAAGAGCCTACAAGTACTCAGTTTGTCAAATAACAGCATATCTGGTTCAATCCCTCAAGAATTGGGCAATTGTAGCATGCTTGATCAATTGGATTTGTCCAGTAACAGTTTTTCTGGTGAGATACCAGCATCCCTTGGTGACATCAAAAAGCTTTCGTCTCTCTCTTTGTACAGTAACTCCCTCACTGGTGAAATACCAGAGGGGTTGTTCAAGAATCAGTTTCTGGAGCAAGTGTACCTCCATTACAATAAACTCAGTGGTTCTATCCCCTTGACAGTTGGAGAAATGACTAGCCTTAGGTACCTGTGGCTGCATGGCAATAAATTATCTGGAGTTCTACCAGATTCAATTGGCAACTGCACCAAGTTGGAGGAGCTCTATCTACTAGATAATCAATTGAGTGGGAGTCTTCCGAAAACCTTGAGCTATATCAAAGGACTGAAGATTTTCGATATTACCGCAAATAGTTTCACAGGTGAGATCACATTTAGTTTTGAGGATTGCAAGCTTGAGGTATTCATATTGTCATTCAATCAGATTAGCAACGAAATTCCATCATGGCTAGGGAATTGTAGTAGCTTGACACAGCTTGCATTTGTCAACAATAATATATCTGGCCAGATTCCATCGTCTCTGGGTTTATTGAGAAACCTCTCTCAACTTTTACTTTCTGAGAACTCACTTTCTGGGCCAATTCCTCCTGAGATAGGTAACTGCCAGTTGCTGGTGTGGCTGGAGTTGGATGCAAACCAGCTCAATGGCACTGTTCCTAAAGAGCTGGCAAATCTGAGAAAATTGGAGAAACTCTTTCTGTTTGAAAACCGCCTCATTGGGGAGTTCCCTGAGGATATTTGGAGCATCAAGAGCCTGCAAAGTGTCCTTATCTATGAAAACAGTTTTACTGGGAGGCTACCTCCAGTGCTAGCTGAGCTGAAGTTCCTGAAGAACATTACACTTTTCAACAATTTCTTCACTGGAGTTATACCACCAGATTTGGGTGTTAATAGTCGTTTAACCCAAATTGATTTCACAAACAACAGTTTTGTTGGTGGAATCCCGCCTAACATTTGTTCAGGGAAAAGATTGAGAATTTTGGACTTGGGGCTTAATCTTCTCAATGGTAGCATCCCATCCAATGTTATGGACTGCCCAAGTTTGGAACGATTTATTCTCCAAAACAACAATCTAAGTGGGCCCATTCCACAATTTAGGAACTGTGCAAATCTGAGCTATATAGATCTGAGTCATAATTCCTTAAGTGGCAACATTCCAGCAAGCTTGGGGAGATGTGTAAATATTACGATGATAAAATGGTCAGAAAACAAGTTGGTTGGTCCAATACCATCTGAAATTAGAGACTTGGTGAATTTGAGAGTGCTAAACCTCTCGCAAAACAGCCTGCAAGGTGTTCTTCCAGTGCAGATTTCTAGTTGCTCCAAGCTGTACTTGCTTGACTTGAGTTTCAACTCTTTGAATGGTTCGGCACTCACAACCGTAAGCAACCTTAAGTTTCTGTCACAACTACGGTTACAAGAGAATAAATTCAGTGGAGGCATACCTGATTCCCTCTCGCAGTTGGATATGCTTATTGAGCTGCAACTTGGTGGCAACGTTCTTGGGGGCAGTATCCCTTCATCGTTAGGAAGGTTGGTAAAACTGGGCATTGCATTGAATATTTGTAGCAATGGACTCGTTGGTGGCATTCCGCCATTATTGAGCAATTTGGTGGAGCTGCAAAGTTTAGATTTGTCACTTAATGGCCTCACTGGAGACCTAGACATGTTAGGAAACTTACAATTACTGCATGTATTGAATGTTTCCTACAATAGATTCAGTGGTCCGGTCCCAGAAAATCTTCTGAATTTTCTGGTTTCCTCACCGAGCTCCTTTAATGGCAATCCAGACCTCTGTATCTCTTGCCATACCAATGGTTCTTATTGCAAGGGGTCTAATGTTTTGAAACCTTGTGGAGAGACCAAAAAACTACACAAACACGTCAAGATTGCTGTTATAGTTATTGGTTCATTGTTCGTTGGAGCAGTTTCCATACTTATACTGAGTTGCATCCTTTTAAAGTTTTATCATCCAAAGACAAAAAATTTAGAATCAGTCAGTACTCTGTTTGAAGGTTCTTCTTCTAAATTAAATGAGGTTATAGAGGCTACTGAAAACTTTGATGACAAGTATATCATCGGTACTGGTGCTCATGGAACTGTTTACAAGGCAACACTGAGGTCAGGAGAAGTATATGCTGTAAAGAAGCTTGCAATATCTGCACAGAAAGGTTCGTACAAAAGCATGATCAGAGAACTGAAGACATTAGGCAAAATCAAGCATCGGAACTTGATAAAGCTGAAAGAGTTTTGGTTAAGAAGTGAGTATGGGTTCATGCTTTATGTTTATATGGAGCAAGGTAGCCTTCAAGATGTTCTGCATGGGATCCAACCTCCTCCAAGTTTGGACTGGAGTGTGCGCTATACCATAGCTCTTGGTACTGCCCATGGGCTAGCGTATCTTCATGATGACTGTCAACCTGCAATTATTCACCGAGATATTAAGCCCAGTAATATACTTCTGAATGGGGACATGGTTCCACATATAGCAGATTTTGGCATTGCAAAGCTCATGGACCAGTCTTCTTCTGCTCCACAGACTACTGGAGTTATTGGCACCTTTGGATATATGGCCCCAGAGTTGGCATTTTCCACCAGGAGTAGTATCGAGTCCGATGTATACAGCTACGGCGTCATACTCCTTGAGCTGCTAACAAAAAAACAGGTGGTGGATCCCTCGTTCCCCGACAACATGGACATTGTCGGTTGGGTGACCGCAACGCTCAACGGCACCGACCAAATCGAACTCGTCTGCGACTCGACGCTGATGGAGGAAGTCTATGGCACGGTGGAAATAGAGGAAGTCAGCAAGGTCCTGTCCTTGGCTCTTAGGTGCGCAGCGAAGGAAGCGAGCCGAAGGCCGCCCATGGCCGATGTTGTGAAGGAGCTGACTGATGTCAGGAAATCCGCCGGGAAGTTGTCCAAGCCGGAGAAGACGGCCTCCCGGAGCTCGTCCTGA
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| Protein seq | MRLVVWHWFFFFFFTSVSSSWSLTSDGLALLSLSRDLILPHSISSTWKASDTTPCNWDGVSCNKKNSVVSLDLSSSGVSGSLGPQIGLMKSLQVLSLSNNSISGSIPQELGNCSMLDQLDLSSNSFSGEIPASLGDIKKLSSLSLYSNSLTGEIPEGLFKNQFLEQVYLHYNKLSGSIPLTVGEMTSLRYLWLHGNKLSGVLPDSIGNCTKLEELYLLDNQLSGSLPKTLSYIKGLKIFDITANSFTGEITFSFEDCKLEVFILSFNQISNEIPSWLGNCSSLTQLAFVNNNISGQIPSSLGLLRNLSQLLLSENSLSGPIPPEIGNCQLLVWLELDANQLNGTVPKELANLRKLEKLFLFENRLIGEFPEDIWSIKSLQSVLIYENSFTGRLPPVLAELKFLKNITLFNNFFTGVIPPDLGVNSRLTQIDFTNNSFVGGIPPNICSGKRLRILDLGLNLLNGSIPSNVMDCPSLERFILQNNNLSGPIPQFRNCANLSYIDLSHNSLSGNIPASLGRCVNITMIKWSENKLVGPIPSEIRDLVNLRVLNLSQNSLQGVLPVQISSCSKLYLLDLSFNSLNGSALTTVSNLKFLSQLRLQENKFSGGIPDSLSQLDMLIELQLGGNVLGGSIPSSLGRLVKLGIALNICSNGLVGGIPPLLSNLVELQSLDLSLNGLTGDLDMLGNLQLLHVLNVSYNRFSGPVPENLLNFLVSSPSSFNGNPDLCISCHTNGSYCKGSNVLKPCGETKKLHKHVKIAVIVIGSLFVGAVSILILSCILLKFYHPKTKNLESVSTLFEGSSSKLNEVIEATENFDDKYIIGTGAHGTVYKATLRSGEVYAVKKLAISAQKGSYKSMIRELKTLGKIKHRNLIKLKEFWLRSEYGFMLYVYMEQGSLQDVLHGIQPPPSLDWSVRYTIALGTAHGLAYLHDDCQPAIIHRDIKPSNILLNGDMVPHIADFGIAKLMDQSSSAPQTTGVIGTFGYMAPELAFSTRSSIESDVYSYGVILLELLTKKQVVDPSFPDNMDIVGWVTATLNGTDQIELVCDSTLMEEVYGTVEIEEVSKVLSLALRCAAKEASRRPPMADVVKELTDVRKSAGKLSKPEKTASRSSS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0446200 | RBH | 0.258550 | 0.326624 | 3.648107 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g34640 | RBH | 0.173283 | 0.217720 | 0.918821 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0446400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0017840 | RBH | 0.0 | 0.689652 | 2.464287 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0017700 | RBH | 0.100798 | 0.562843 | 1.358541 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0017630 | RBH | 0.0 | 5.952419 | 2.256333 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0017900 | RBH | 0.018742 | 0.117038 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0017760 | RBH | 0.0 | 3.220984 | 19.620502 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0346300 | RBH | 2.7926745 | 9.330016 | 3.795165 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0017670 | RBH | 0.049714 | 0.328292 | 0.584629 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0366000 | RBH | 2.2948425 | 5.04629 | 5.2481855 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0017030 | RBH | 0.000000 | 0.103824 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0017300 | RBH | 0.142501 | 0.944074 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0017130 | RBH | 0.670385 | 16.260252 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0017940 | RBH | 0.314649 | 0.543502 | 0.729224 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0017350 | RBH | 0.057846 | 3.540200 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G017510 | RBH | 0.0 | 0.913271 | 1.242336 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0017580 | RBH | 0.324663 | 9.753433 | 3.226537 |
