Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os08g0124250 | OGI:08003560 | 8/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr08:1315840-1316196 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ACAAACTCCTTGTGGTGATCCACCTGTCACCATTAGCCTTGCGGATCATTGTTGACCTCCTCATCAGTGAGCCTCTCTTGATACATTAGACATGACGTGGTGGGGCTCGGTGGCAAAGATGAAGCTGTTTTCTAGTCCTTGTCGAAGACATGGAACGTCTCCCTCTGGTCCCCTCCTCTTAGTCCTTGTCCTTCATCTAATCATTTAGTGCGCTATTAGGTCCAGGAACTTGTAGAAGTCGATGATGCCGCTGCCGTCAGTGTCCACCTTGCTAATAATGTCTTATAGCTCCGCCTTCATCGGGTTCAGGCCCAGAGTGTGCATTCTGGTTCCAAGCTTCTTTGGTGATGATTGAAC |
||||||||||
| CDS seq | GACATTATTAGCAAGGTGGACACTGACGGCAGCGGCATCATCGACTTCTACAAGTTCCTGGACCTAATAGCGCACTAA |
||||||||||
| Protein seq | DIISKVDTDGSGIIDFYKFLDLIAH |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os08g0124250 | Os08t0124250-00 | Chr08 | 1315840 | 1316196 | - | irgsp1_rep | ||
| CDS seq | GACATTATTAGCAAGGTGGACACTGACGGCAGCGGCATCATCGACTTCTACAAGTTCCTGGACCTAATAGCGCACTAA |
|||||||
| Protein seq | DIISKVDTDGSGIIDFYKFLDLIAH |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0124250 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g15510 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0234051 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009980 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0010060 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0009930 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0000190 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0008080 | SBH | 0.652269 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0100700 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0008010 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0129900 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0008430 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0000180 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0000190 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0000920 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0008080 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G008190 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0000180 | RBH | 0.0 | 0.0 | 0.0 |
