Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os07g0487300 | OGI:07051370 | 1/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr07:17987936-17991989 | ||||||||
| Gene Symbol | LIL1, ALS1 | ||||||||||
| DNA seq | TTACCTGCCGTTCACAATTGTTATGGTTACATCGTTTATGCTACTAGGTGCAGTATTAGACAGCTCTCCATGTTTCACCCTTACATTAAAGAATGCTGGTTGTTTGGGCTCAGGTAGAATTTTCAACTCGCTTGAAAGCATCTTAACAACTGCGGACATGGTGGGACGATCAACCGCATTCTCTTGAACACATAAAAGTGCAACTTTCATACATTTCTTTATTTCCATCATTTGACCTTCACTTACTAATGATGGATCTACAAGTTCATGCCAACTTCCATCCTTCCATAGCTGCCATGCCTGCAACAAGTTTGATGTGATGAGCTATTGTGTGCAATTTTAGTGAATGAGAATTTTGAGCCATGAGCCAAGTTAAGGCGGGTTTCATAAAGCATATGCTATAATTTTTCAAAATGAAGACCGACTATCATAAAATTTTAACTATTATTGCACTCATGCATGCACAAACCGTGTAGTTCATACATATTCCCAGCAGTGTGCTCGATTATTGTGTATCTTTAAAATGAATATATTAGTCTCTTATACTAAATTTTTAAAAAAACTTACATAGCCAAGGAGGTTGAAGAAGTCCCCATATTGGTGAAACCCAGCGTTTCTTTTCCCACTAATAATCTCAAGAACCAGAACTCCAAAGCTAAAGACATCCGATTTCAGCGAGAAGCAACCCTCAGATGCATACTCAGGAGCCATATACCCACTGAAATCAAAACAAAATGCATGCACATGTTAAAACACCTCAGTCTGGATCCACCAAAATCATAATAAGAGATAAGTCTGTAGTACAACCCTCAAACGTTGGAATTGTCTTAAAAGACACCCCTTAACTATGTAACCGGATATTTTACACCCCTCGACATACTATCAAAACCAACCAAAATACCATGTGGGTTCAACACACAGCTTGGTTTTAATAATGGTTTTCATGATTTTGATATCGAAAAATATATGTTTTTTTTTCACTCACATTCAAATACTATTCACATATCATCCAAACTAGGAGACATAAGTAAAAAAAATTGTAATAATTAGCTGTAGCTTTTTGAGCAAAGGCCAGAATGTTATTCCATTATTAAAAAATACAAGTAAAAAAAAGAATTTGGATTTCAAAATCATGGAAACCACCATTAGAACTGGGTTATATTGCCCTTAGGTTGTACGTTGAGGGGTGTATGTGTTCGGTTTGGTAGAGTTAAGTAGTGTTTTTTAAGACAAACCAGATAGTTGAGGGAGTAAAATGAGCTTATCCCTAAATCACTTGGACTAGCTAAATAACAAATTTGAAAGGTGAATTAACTCTTACTAAGTGCCCACCACCCTTTTTGTATTTCTTTGGACATCATTTGAGTCAAATATCTTAGCTAACCCAAAGTCAGAGATTTTAGGATTCATGTCACGGTCTAGTAGAATATTGCTTGCTTTTAAGTCTCTATGTATGATGCATAACCGGGAGTGTTTGTGGAGATACAAAAGCCCTTGTGTTATTCCTTCTATTATGTTCAGGCGTGTTTTCCAGTTGAGCAATGCTGCTCTTTTCAGATCTGCATAGTGAAGTATAAGGATATATGTTACTATTTATTTGATGCTATATATATAGAAAATAACCACATTTTTTGAAAAACAATGTATAAGCATACCAAAGATGAAGAAGTCTAAACTCTTGTTTGGCATGTATTCATATATTAGTAAGTTCTCTTCTCCTTGAATGCAACATCCTCGAAGGTTTACTAAATTGGTATGTTGTAGCTTTGCAATAAGTTGAATTTCATTTTTGAACTCAACCAGGCCTTGACTTGAATGTGCAGCAAGTCGCTTAACTGCTACCTCAAGCCCATTGGGCAATTGGCCCTGCATTTTTTTTCAAACAAAGTTCAAGTAGTTCATACTTCAAGTAAACATGTATTGAAGATTTTTATGTGTGTGTATATATCTAATTTATTTTACCTTGTATACGGAGCCAAAACCTCCTTCTCCAAGTTTCTTATCTTCCGAGAAGTTGCTAGTAGCATCTTCTATCTGAGAGAAATCAAATAGCATAAACTCTGAATCGCTTTCTTCTAGTCTCCAAAGCTTTAATACTTCTTCTCTGGCCATTGTATCCTTTTTTCGCAACATTGATTTGTCTAAAGCAACAAATACGTTATTAAAAGGCTAATAACACAAGAGTAGTCTGTCAGAACTCAGAAACAATAATTATATTACAATTTAAAGATTTGATAAGTTGATTTCTATAACTCACGGTTTCTTAATCTCCTTATCCATGCAAAACAGAATATGACGACAGGGCAAAGTGCTATCAGTGGCACAAGCAAAGCAACTGTCAACACCTTCTTTCTCCCTGCAAGGAAATCTCATCTCCAAAAATAATTATACATTGCTCATAATTTTATTTTATATTCTCATTACACATGATGAAATAACTTCAATACCCCATTTGGTTGTGAGCGAGGGGAGTGGATACGGGCAGCGGCGTAATTTTTATCGTGTGGTGGGGCGTTGGCTTGGTTCGGCTCGGCTCGTGGCTGTCTGATTTTTTTAAACCGGCATCTATAGATTATCTAAAACTAGCACCTATAACACATGTTACTTTTACTTATCGTTATCGTAGTATACTTCTACAGCAACGCACGGGGTTTCACCTATAGTTGGCCATAAGGCCCGACAGCCCGGCCCAGGCACGGCATGGCCTGATCGCTGTCGGGCCCGTGCCGGCACGGCCCGGTTGTTGGGCCATGCCTGGGCCTATGCCTTGGCACGGTGGGCCGGACTGGCACGGCACAAACTTTAGGGAGGTGAAATAAACTTATTTTAAACCACCTATAAGACAAGGCACAAAGAATAGGGAGGATAAATAGACGTATTATTTGGCACGGCCCAAAGTGTAGGGACATTAAATAGACTTGTTTTAGTTATATATATGTCACAACCTAAAGAGGAGGGAGGGGAAACAAACTTATTTCAAAGAAAGCACAATGGACTATCCGTGCCTTCGGGCTGGTCCGGCACGGCCCGACCCTTATTGGGCCGTGCCTGGTCCACAGGTGGAGCACATGGGCCGGCCCGGCAAATCTTGGCCCGGGCAAGACCGGGACCAACTATAGTTTCACCTAGTATATATAGTATATATAAAAGGTGACTGTCCAAACATACCGGAACGTGTCTCCGTCACCGGCGGAGGCGGCGGTGGGCTCGATGGCGCCGTTGAGTTGATCTCCGACAGTGACCCGATCTTCAGCTTGGGCTCCCCGCCGTAGAACTTGTACGTGTCGTACCTGTAACCGCAACGGGCGCCGATGTTGCGCACGCCGGAGACCGAGCCGTTGAAGGTGGTGTTGCCGACGAGGTCCTGCAGGCACTGCCGGCAGTCGCCGCCGGACATGTCCGGCGTGCACTGCATCAGCGAGAACAGCGGCGGCGTGACGACGTCCATCCGCACCGTGGTGTACCACCTCACGGCGGCGGCCCCGCCGCCCGTGGAATTGTACGGCACGGCCCACTGCATCGTGTAGCTCAGGAGCGCCCTCACGAGGGTGACGAAGTCGGCGCCGCCGCCGCCACGCCGGGTGGAGCGATCGACGTCGTAGAGCCTCACCTGGGCCGGGTTGGCCGGAGAGGAGAGGAAGTCGTCGCCGGAGAAGTAGAGGAGGCAGGGGTCGTAGTAGACGGCCACCTCCTTGCTGTAGGGGCACACGCTCTGCGCGTCGCGGAAGGCGCGGGAGGCGCAGTCGGCGCACGACGACGACGAGGCGTTGGCGGAGGCGGTGTCGCCTCTGCAGAGGGTCAGGGCGAACACCCTGTCGGGCTCGGCGTCGCCGCCGCCGGCGGCGTCCTTGGCGAAGAGTGCGGGGGAGGAAGACGACGCGGTCGACGGGAGGGTCGCGGCGAGGGCCTGCAGGTTGGCCTGGTATTTGCTCCCGGCCGTGTAGTTGCCGCTGCTTCCGCAGTAGTGCTGCCATGGTGGGTCGCCGGATGCAATTGCAGCCAACGGAAGCAGCAGCATCACCAAGACCAGCGGTAGAACGGTCAAAATGGCCAT
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| CDS seq | ATGGCCATTTTGACCGTTCTACCGCTGGTCTTGGTGATGCTGCTGCTTCCGTTGGCTGCAATTGCATCCGGCGACCCACCATGGCAGCACTACTGCGGAAGCAGCGGCAACTACACGGCCGGGAGCAAATACCAGGCCAACCTGCAGGCCCTCGCCGCGACCCTCCCGTCGACCGCGTCGTCTTCCTCCCCCGCACTCTTCGCCAAGGACGCCGCCGGCGGCGGCGACGCCGAGCCCGACAGGGTGTTCGCCCTGACCCTCTGCAGAGGCGACACCGCCTCCGCCAACGCCTCGTCGTCGTCGTGCGCCGACTGCGCCTCCCGCGCCTTCCGCGACGCGCAGAGCGTGTGCCCCTACAGCAAGGAGGTGGCCGTCTACTACGACCCCTGCCTCCTCTACTTCTCCGGCGACGACTTCCTCTCCTCTCCGGCCAACCCGGCCCAGGTGAGGCTCTACGACGTCGATCGCTCCACCCGGCGTGGCGGCGGCGGCGCCGACTTCGTCACCCTCGTGAGGGCGCTCCTGAGCTACACGATGCAGTGGGCCGTGCCGTACAATTCCACGGGCGGCGGGGCCGCCGCCGTGAGGTGGTACACCACGGTGCGGATGGACGTCGTCACGCCGCCGCTGTTCTCGCTGATGCAGTGCACGCCGGACATGTCCGGCGGCGACTGCCGGCAGTGCCTGCAGGACCTCGTCGGCAACACCACCTTCAACGGCTCGGTCTCCGGCGTGCGCAACATCGGCGCCCGTTGCGGTTACAGGTACGACACGTACAAGTTCTACGGCGGGGAGCCCAAGCTGAAGATCGGGTCACTGTCGGAGATCAACTCAACGGCGCCATCGAGCCCACCGCCGCCTCCGCCGGTGACGGAGACACGTTCCGACAAATCAATGTTGCGAAAAAAGGATACAATGGCCAGAGAAGAAGTATTAAAGCTTTGGAGACTAGAAGAAAGCGATTCAGAGTTTATGCTATTTGATTTCTCTCAGATAGAAGATGCTACTAGCAACTTCTCGGAAGATAAGAAACTTGGAGAAGGAGGTTTTGGCTCCGTATACAAGGGCCAATTGCCCAATGGGCTTGAGGTAGCAGTTAAGCGACTTGCTGCACATTCAAGTCAAGGCCTGGTTGAGTTCAAAAATGAAATTCAACTTATTGCAAAGCTACAACATACCAATTTAGTAAACCTTCGAGGATGTTGCATTCAAGGAGAAGAGAACTTACTAATATATGAATACATGCCAAACAAGAGTTTAGACTTCTTCATCTTTGATCTGAAAAGAGCAGCATTGCTCAACTGGAAAACACGCCTGAACATAATAGAAGGAATAACACAAGGGCTTTTGTATCTCCACAAACACTCCCGGTTATGCATCATACATAGAGACTTAAAAGCAAGCAATATTCTACTAGACCGTGACATGAATCCTAAAATCTCTGACTTTGGTGGGTATATGGCTCCTGAGTATGCATCTGAGGGTTGCTTCTCGCTGAAATCGGATGTCTTTAGCTTTGGAGTTCTGGTTCTTGAGATTATTAGTGGGAAAAGAAACGCTGGGTTTCACCAATATGGGGACTTCTTCAACCTCCTTGGCTATGCATGGCAGCTATGGAAGGATGGAAGTTGGCATGAACTTGTAGATCCATCATTAGTAAGTGAAGGTCAAATGATGGAAATAAAGAAATGTATGAAAGTTGCACTTTTATGTGTTCAAGAGAATGCGGTTGATCGTCCCACCATGTCCGCAGTTGTTAAGATGCTTTCAAGCGAGTTGAAAATTCTACCTGAGCCCAAACAACCAGCATTCTTTAATGTAAGGGTGAAACATGGAGAGCTGTCTAATACTGCACCTAGTAGCATAAACGATGTAACCATAACAATTGTGAACGGCAGGTAA
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| Protein seq | MAILTVLPLVLVMLLLPLAAIASGDPPWQHYCGSSGNYTAGSKYQANLQALAATLPSTASSSSPALFAKDAAGGGDAEPDRVFALTLCRGDTASANASSSSCADCASRAFRDAQSVCPYSKEVAVYYDPCLLYFSGDDFLSSPANPAQVRLYDVDRSTRRGGGGADFVTLVRALLSYTMQWAVPYNSTGGGAAAVRWYTTVRMDVVTPPLFSLMQCTPDMSGGDCRQCLQDLVGNTTFNGSVSGVRNIGARCGYRYDTYKFYGGEPKLKIGSLSEINSTAPSSPPPPPPVTETRSDKSMLRKKDTMAREEVLKLWRLEESDSEFMLFDFSQIEDATSNFSEDKKLGEGGFGSVYKGQLPNGLEVAVKRLAAHSSQGLVEFKNEIQLIAKLQHTNLVNLRGCCIQGEENLLIYEYMPNKSLDFFIFDLKRAALLNWKTRLNIIEGITQGLLYLHKHSRLCIIHRDLKASNILLDRDMNPKISDFGGYMAPEYASEGCFSLKSDVFSFGVLVLEIISGKRNAGFHQYGDFFNLLGYAWQLWKDGSWHELVDPSLVSEGQMMEIKKCMKVALLCVQENAVDRPTMSAVVKMLSSELKILPEPKQPAFFNVRVKHGELSNTAPSSINDVTITIVNGR |
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| Function | Cysteine-rich receptor-like protein kinase 10 [UniProtKB/Swiss-Prot:Q8GYA4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os07g0487300 | Os07t0487300-00 | Chr07 | 17987936 | 17991989 | - | irgsp1_rep | ||
| CDS seq | ATGGCCATTTTGACCGTTCTACCGCTGGTCTTGGTGATGCTGCTGCTTCCGTTGGCTGCAATTGCATCCGGCGACCCACCATGGCAGCACTACTGCGGAAGCAGCGGCAACTACACGGCCGGGAGCAAATACCAGGCCAACCTGCAGGCCCTCGCCGCGACCCTCCCGTCGACCGCGTCGTCTTCCTCCCCCGCACTCTTCGCCAAGGACGCCGCCGGCGGCGGCGACGCCGAGCCCGACAGGGTGTTCGCCCTGACCCTCTGCAGAGGCGACACCGCCTCCGCCAACGCCTCGTCGTCGTCGTGCGCCGACTGCGCCTCCCGCGCCTTCCGCGACGCGCAGAGCGTGTGCCCCTACAGCAAGGAGGTGGCCGTCTACTACGACCCCTGCCTCCTCTACTTCTCCGGCGACGACTTCCTCTCCTCTCCGGCCAACCCGGCCCAGGTGAGGCTCTACGACGTCGATCGCTCCACCCGGCGTGGCGGCGGCGGCGCCGACTTCGTCACCCTCGTGAGGGCGCTCCTGAGCTACACGATGCAGTGGGCCGTGCCGTACAATTCCACGGGCGGCGGGGCCGCCGCCGTGAGGTGGTACACCACGGTGCGGATGGACGTCGTCACGCCGCCGCTGTTCTCGCTGATGCAGTGCACGCCGGACATGTCCGGCGGCGACTGCCGGCAGTGCCTGCAGGACCTCGTCGGCAACACCACCTTCAACGGCTCGGTCTCCGGCGTGCGCAACATCGGCGCCCGTTGCGGTTACAGGTACGACACGTACAAGTTCTACGGCGGGGAGCCCAAGCTGAAGATCGGGTCACTGTCGGAGATCAACTCAACGGCGCCATCGAGCCCACCGCCGCCTCCGCCGGTGACGGAGACACGTTCCGACAAATCAATGTTGCGAAAAAAGGATACAATGGCCAGAGAAGAAGTATTAAAGCTTTGGAGACTAGAAGAAAGCGATTCAGAGTTTATGCTATTTGATTTCTCTCAGATAGAAGATGCTACTAGCAACTTCTCGGAAGATAAGAAACTTGGAGAAGGAGGTTTTGGCTCCGTATACAAGGGCCAATTGCCCAATGGGCTTGAGGTAGCAGTTAAGCGACTTGCTGCACATTCAAGTCAAGGCCTGGTTGAGTTCAAAAATGAAATTCAACTTATTGCAAAGCTACAACATACCAATTTAGTAAACCTTCGAGGATGTTGCATTCAAGGAGAAGAGAACTTACTAATATATGAATACATGCCAAACAAGAGTTTAGACTTCTTCATCTTTGATCTGAAAAGAGCAGCATTGCTCAACTGGAAAACACGCCTGAACATAATAGAAGGAATAACACAAGGGCTTTTGTATCTCCACAAACACTCCCGGTTATGCATCATACATAGAGACTTAAAAGCAAGCAATATTCTACTAGACCGTGACATGAATCCTAAAATCTCTGACTTTGGTGGGTATATGGCTCCTGAGTATGCATCTGAGGGTTGCTTCTCGCTGAAATCGGATGTCTTTAGCTTTGGAGTTCTGGTTCTTGAGATTATTAGTGGGAAAAGAAACGCTGGGTTTCACCAATATGGGGACTTCTTCAACCTCCTTGGCTATGCATGGCAGCTATGGAAGGATGGAAGTTGGCATGAACTTGTAGATCCATCATTAGTAAGTGAAGGTCAAATGATGGAAATAAAGAAATGTATGAAAGTTGCACTTTTATGTGTTCAAGAGAATGCGGTTGATCGTCCCACCATGTCCGCAGTTGTTAAGATGCTTTCAAGCGAGTTGAAAATTCTACCTGAGCCCAAACAACCAGCATTCTTTAATGTAAGGGTGAAACATGGAGAGCTGTCTAATACTGCACCTAGTAGCATAAACGATGTAACCATAACAATTGTGAACGGCAGGTAA
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| Protein seq | MAILTVLPLVLVMLLLPLAAIASGDPPWQHYCGSSGNYTAGSKYQANLQALAATLPSTASSSSPALFAKDAAGGGDAEPDRVFALTLCRGDTASANASSSSCADCASRAFRDAQSVCPYSKEVAVYYDPCLLYFSGDDFLSSPANPAQVRLYDVDRSTRRGGGGADFVTLVRALLSYTMQWAVPYNSTGGGAAAVRWYTTVRMDVVTPPLFSLMQCTPDMSGGDCRQCLQDLVGNTTFNGSVSGVRNIGARCGYRYDTYKFYGGEPKLKIGSLSEINSTAPSSPPPPPPVTETRSDKSMLRKKDTMAREEVLKLWRLEESDSEFMLFDFSQIEDATSNFSEDKKLGEGGFGSVYKGQLPNGLEVAVKRLAAHSSQGLVEFKNEIQLIAKLQHTNLVNLRGCCIQGEENLLIYEYMPNKSLDFFIFDLKRAALLNWKTRLNIIEGITQGLLYLHKHSRLCIIHRDLKASNILLDRDMNPKISDFGGYMAPEYASEGCFSLKSDVFSFGVLVLEIISGKRNAGFHQYGDFFNLLGYAWQLWKDGSWHELVDPSLVSEGQMMEIKKCMKVALLCVQENAVDRPTMSAVVKMLSSELKILPEPKQPAFFNVRVKHGELSNTAPSSINDVTITIVNGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0487300 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g30410 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0488400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0015140 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0014970 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0014960 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0014900 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0014890 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0301100 | SBH | 0.028158 | 0.0338355 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0015410 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0311100 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0014740 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0014890 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0014870 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0017880 | SBH | 0.418212 | 0.293664 | 1.245275 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0014910 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G014840 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0014750 | SBH | 0.0 | 0.0 | 0.0 |
