Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os07g0471900 | OGI:07048240 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr07:16933763-16938607 | ||||||||
| Gene Symbol | BHLH77, OsbHLH077, bHLH077, bHLH77, OsNRP1, NRP1 | ||||||||||
| DNA seq | ATGGCCAGGGGCGCCGCCGGCGGCGAGGTCGGGAGGAGCATGCCGGCGGTGCACGACGCCCACGACGACAGCGAGAACTTCCTCGAGCTGCTCAACTCGAGGACGCTCGCGCCGGAGCTCTTCGCCGAGCCGCCGGCGTGCGACTACCTCAAGAAGATGGAGTACGGCGGCGGCGGCGGCGGAGGAGGGGGAGGCTGGCCGGAGCACCAGTTCACGGCGGCGGCCGCGCTGGAGAAGCACCTGAGCTCCGCCGCCGCCGCTGGTTACGGCGGCGCGCTGGCGCACCACCACCACGCCGCGGGCGCGCCGGAGCGGCTCACGGCCAACCTCTCCGACCTGGTCAGCAACTGGTCCATCGCGCCGCCCAACCACGGCCACCACGTCGGCGGCGCCGCCGCATGCGATAACCCAGCGGTGGCCGCGGCCATGGCAGCAGCCCACGGCGGCGGGAACGTGAAGCAGTCCGGCAGCAGCTTCCTTGACAGCGGCGGGGGCGGCGGCGGCGCGATGCTGCAGCAGGAGAGCAGCAGCAGCACGGGCACCGGCGGCGGCGGGCAGGACTTCCTGAGGCCGATGGGGCTTGCCGCCGGGTCGTCGTCGTACAGCTCCATGCTAGGGCTGAGCAGCAGGATGTACGGCGGCGGCGGCACGGCCACCATGGACGTGCCGTGGGGGAGCAGCAATGCCGGCGCGGCGAGGAGCCTGTCGGACCTGATATCGTTCGGCGGAGGCGCGATGGACAAGCCGCCGCCGCCGCCACCGTCGTCAGCGCCGGCGAGGACGTCGTCGGCGGACTACAAGAAGCAGCAAGGGCAGCAGGAGATCTCGTCCCCAGTACGTAATGTATATATACATAATATTTCTATCCAAAATGTATTACGCCGTCAACTTTCCATATAACGTTTGCATTATTGATCTTATTAAAAATTTAGTACAAATATATAAAATTTAAGTTAAGTTATAGTTACATTAATAAAAGAAAATCATACCAAAATAAATAATATTTACATAATATTTTTAATAAGACGAATAGTTAAACGGTATAAAAAATTCGGTGACACGAAGGGAGTAATATATATGGTTCATCGCCAGTGATCGAGCGATGCACGCACTGATGATCTGATCATATACGTGTTGCATTCACACGCAGGTGAAGACGAGCAGCAGCGGCGGTGGCGGGAAGGAGGGGAAGAAGAAGAGGTCGGAGGAGGCGGCAGGGTCGGAGGGGAGCACGAAGAAGTCCAAGCATGAGGCCACCTCTCCCACCTCTTCTCTCAAAGTATGCCCCCATCATTTAGTATGAATGTGTGTAAAATATTAATCATTCTTAAAATTCTTCAATTATAAAAACAAGTAATATATTATAACCAAATAAATAATACTTGCGCAAATTTTTTTTAAGATGAATGATCAACAGTAACATATATGAAAACAGGGTAGCACAATTTGTTCCTAGCTCTTACGCATGTTGCACTGGTTGTCCTTCACGTGCATGAGCAAATTGCAAGTTGATCATTATAATTGATCAGTCATATATGCAATATACGCAGGTCAGATGATGGGGTTTAATTAATTTAATTTCTGCCAGAACAAATTAATGTGCAGTGATTAACAAAGTGAACTCTACAAATTATTTGACCTAAAATAAATATAAATATGATGTTTCCATCGATCAATTATCCATCATCTAATAGTACTATCCTGTAGGACTTTTCTTTTTGAAAAAAAAAGACATTAAGGCATCGTCAAGAACATAAATTTTACATGTATCAGAATTTCCATAGAAATCTGGAAAAGAAATCCCATGTTTTGAGGAGGGTATTATCCTGAGAAATCGGAGTGTTGCATGTTTTCGTAGTAGTGCAAGCTCATCGACATTGTTACCTAGTAGCTCATACCATGCCAGCATGCTGCAGGCCTTTATTTGTATAACAGTATTCCTAGAAAACTTTTGCAAGTTTTTTGTCCCCAAAACTTTCATATATATACTTGTGACCATCAGATCGCTTTGAGGTTTGTGCATGAAGGAAAAAAAACTGCTAGAAAAAAAATTTCAGACATGTCACCCGCAAGATCCTAATGCTAACCAGCCAAACCATAGTTGAATATAGGTTTTATATAAGTTATATCATAATTATGGTGCAGTTATAGTGTAATTATAATTACAATTACATTGTAGTTACAGTGCACTTCAATTATACTATTACATCTCAGAAAACTTGCGACAGTTTTTGTATACTCTCTTTGTATAATGCCCAACGAACAGATGAACAGCTTACTTAGAAGAAAATAATTAACGGTTGTCAAATCTCCTCGCAATGACACTCATGCATTATACATTATATACATCCTTACTGAAAAATTAGCCTGTATTGTAAATATACATGTGTAAGCAATTATCTCTACGTACAGCAGTGCAGCAGTACATAAGGTGCTTTTTATATAGCTTTTATATATCTATCTTTTAGGATTGCTGATGCTGCTTGGTTTAACAGTCGCAGGTACCAAAAGTAAAGTTAGGGGACAAGATCACTGCACTGCAACAGATAGTCTCACCATTTGGAAAGGTAAAGTCCGATTCCAATATGTACAATTCGTTGTTTTTGTGGTAATTTTTACGTATAAACTAAAATGTGGTCAAATGATGCAAAATTTTACAAATTTATACTAATTATTCCTATACTGATGCAATAAGTTTGAAGAGAGGGGGGGGGGAATTACTCACTCCTGTACAATATTTAATGATCTGTTGACATACGTACAATTTAAGAAAAATTATATCAATTCATTACAAATTCTTGTCTGTTTTTTATGTGTTCAGTTAAACTTACAGATTATACATAAGTTACCTCAAATATGGATCCCATCTGAGGAACCTAAAATTTACTTTTTTAGGTGACCTATAACATTTATATTTTTATGTTTGTGAAATCAATTTCTTTATAGTGAAGTTTGCTATTTATGATCTGTTTCAGACTGACACAGCATCGGTGCTATATGAGGCGATAAATTACATTAAGTGGTTGCATGAACAAGTGCAGGTAAATTGCAGAAATTTTTTTCTATTTTTATTTCTTCTCAAATGCAATATATACATGTGGTCACTTTTTAGGTCAGTCCTCAAACATAATTGTAAATATTTAGAAATAACCGCTCATGATTGTCAAAAGAAAAGGGTAAAGTCAACTTTTGGCTCTCAAACTCCTCTTGGAGTCCAATTATCCCTTATACATAAAAGCCAATTATTGCTCACGGTTAACTTTCAAAACCAGGCAAATAACACCTCAAAACTTGTTTCATGGTGGTTTTGATTGATATGACGATAGTTTTTGGTAACACGAACTCCTATTATAGGTAAGTTATGTTGATGTAAACCTAACTAAGTGACATCCACGTCAAGAAAACATATATAGTAGGAATTTGCACTAGCAAAAACTACCATCATGTCAAAAAGAAGAAGAAGAAGAAGCAATGCATGTCAATAGGGTCTAGCTAGTACTATAATGCGTTATTTGTTTGGGTTTTAAAGTCGATGGTGAAAACAATAGGTATCATTTTAGGGCCGGTGAAAAATCGACTTTTAAGACTCAAAGGCCAAAAGCCAAAATTTACCAGAAAATACTTTTCTTTTTTTGTTTTTAGAAATTCCTAGCTATGGAATATACTGTAAAGAATGTGGATTAGATCAATAGCTGTGTTTCCCCTTTTTATGTTACGAGAAGAAAGAAAGTATGGGCTTAGCTTTGTGTCATTGCCTACATTTTAATTTGGTAATGGAGAACTTTACACAACCTTTTTATGACTTGTGTAATATAATGAATGCAATTATTGCTTTGTCAAAAAGGATGTTTTTAAGAAAGGCCCCATATATATTTGATATTTCCATTGGAAAAGCCGCATCTAATTAAGATTATATAAGATGAATTGCTGCACCACCAATTATTGGGAGACACGTGTCGAACCTGCAAAGCCTAGCTCAGCTCATACCCTTCCTAGAGGGCCCAGGATAGCCTTCCTTTTGTTCGTATTTTGCACAACATGAGTGTTACTAGTGCTGCTGCTTTTGTGTAATGGAATTCTTTGTCATGGCCCCGTTACACACACCCTTTTTGCAGTTCGGCTCTATCAGTTAGTTATTCATTATATGCAACATGGAAAAGTTTCTAAGAATCAGTTTGTGCGACCAACTATATACAATTTAATTTGACTCCTTATTTCATGCTTAATTGTTGCAGTTGTTGAGTGACCCATACATGAAGTCGAGTAGTAGCAAGGTAAGCTACAAACCTTCTTAATTGTGCACTCCTCCACCAACATATAATTTTAATTTAAATACATGTATATGTCCACGTCGAATATGTCCATCAAACTTAATTTCTAGCTAGCTATAGAATTTTGATCACACTAAGGGTCAAATTCTACATACGCTCACTCCGTCTTAAAAAGAATGCAATTTCTGCATTCAAATTGTACATCAGAGCCATGCATGCATAATCTATTCTTACACCAATCAAATGGCCCAATTAGAGACTAAGCTATAGTCACCATTCCATATATATATCCCAAATAAGGAGTGCCTCCATTATATTGTTCAAAGGATAACACACCACTAAGACACATAATTAATTAGATTATCATCCAATACATTGTTGATGATTTATATATATATTTCAGGATTACAATGCATGGGGAGGGTTGGATAGGAAGGAGAAGGCAGATGCAGAGGTTGACTTGAGAAGTAGAGGGCTGTGCTTGGTGCCTGTCTCCTGCACCCCTCAAGTGTACAGAGATAACAATGGCCCGGACTACTGGACGCCACCCTATAGAAGCTGCTTATACCGATGA
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| CDS seq | ATGGCCAGGGGCGCCGCCGGCGGCGAGGTCGGGAGGAGCATGCCGGCGGTGCACGACGCCCACGACGACAGCGAGAACTTCCTCGAGCTGCTCAACTCGAGGACGCTCGCGCCGGAGCTCTTCGCCGAGCCGCCGGCGTGCGACTACCTCAAGAAGATGGAGTACGGCGGCGGCGGCGGCGGAGGAGGGGGAGGCTGGCCGGAGCACCAGTTCACGGCGGCGGCCGCGCTGGAGAAGCACCTGAGCTCCGCCGCCGCCGCTGGTTACGGCGGCGCGCTGGCGCACCACCACCACGCCGCGGGCGCGCCGGAGCGGCTCACGGCCAACCTCTCCGACCTGGTCAGCAACTGGTCCATCGCGCCGCCCAACCACGGCCACCACGTCGGCGGCGCCGCCGCATGCGATAACCCAGCGGTGGCCGCGGCCATGGCAGCAGCCCACGGCGGCGGGAACGTGAAGCAGTCCGGCAGCAGCTTCCTTGACAGCGGCGGGGGCGGCGGCGGCGCGATGCTGCAGCAGGAGAGCAGCAGCAGCACGGGCACCGGCGGCGGCGGGCAGGACTTCCTGAGGCCGATGGGGCTTGCCGCCGGGTCGTCGTCGTACAGCTCCATGCTAGGGCTGAGCAGCAGGATGTACGGCGGCGGCGGCACGGCCACCATGGACGTGCCGTGGGGGAGCAGCAATGCCGGCGCGGCGAGGAGCCTGTCGGACCTGATATCGTTCGGCGGAGGCGCGATGGACAAGCCGCCGCCGCCGCCACCGTCGTCAGCGCCGGCGAGGACGTCGTCGGCGGACTACAAGAAGCAGCAAGGGCAGCAGGAGATCTCGTCCCCAGTGAAGACGAGCAGCAGCGGCGGTGGCGGGAAGGAGGGGAAGAAGAAGAGGTCGGAGGAGGCGGCAGGGTCGGAGGGGAGCACGAAGAAGTCCAAGCATGAGGCCACCTCTCCCACCTCTTCTCTCAAATCGCAGGTACCAAAAGTAAAGTTAGGGGACAAGATCACTGCACTGCAACAGATAGTCTCACCATTTGGAAAGACTGACACAGCATCGGTGCTATATGAGGCGATAAATTACATTAAGTGGTTGCATGAACAAGTGCAGTTGTTGAGTGACCCATACATGAAGTCGAGTAGTAGCAAGGATTACAATGCATGGGGAGGGTTGGATAGGAAGGAGAAGGCAGATGCAGAGGTTGACTTGAGAAGTAGAGGGCTGTGCTTGGTGCCTGTCTCCTGCACCCCTCAAGTGTACAGAGATAACAATGGCCCGGACTACTGGACGCCACCCTATAGAAGCTGCTTATACCGATGA
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| Protein seq | MARGAAGGEVGRSMPAVHDAHDDSENFLELLNSRTLAPELFAEPPACDYLKKMEYGGGGGGGGGGWPEHQFTAAAALEKHLSSAAAAGYGGALAHHHHAAGAPERLTANLSDLVSNWSIAPPNHGHHVGGAAACDNPAVAAAMAAAHGGGNVKQSGSSFLDSGGGGGGAMLQQESSSSTGTGGGGQDFLRPMGLAAGSSSYSSMLGLSSRMYGGGGTATMDVPWGSSNAGAARSLSDLISFGGGAMDKPPPPPPSSAPARTSSADYKKQQGQQEISSPVKTSSSGGGGKEGKKKRSEEAAGSEGSTKKSKHEATSPTSSLKSQVPKVKLGDKITALQQIVSPFGKTDTASVLYEAINYIKWLHEQVQLLSDPYMKSSSSKDYNAWGGLDRKEKADAEVDLRSRGLCLVPVSCTPQVYRDNNGPDYWTPPYRSCLYR |
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| Function | Transcription factor bHLH111 [UniProtKB/Swiss-Prot:Q9FYJ6] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os07g0471900 | Os07t0471900-00 | Chr07 | 16933763 | 16938607 | + | irgsp1_rep | ||
| CDS seq | ATGGCCAGGGGCGCCGCCGGCGGCGAGGTCGGGAGGAGCATGCCGGCGGTGCACGACGCCCACGACGACAGCGAGAACTTCCTCGAGCTGCTCAACTCGAGGACGCTCGCGCCGGAGCTCTTCGCCGAGCCGCCGGCGTGCGACTACCTCAAGAAGATGGAGTACGGCGGCGGCGGCGGCGGAGGAGGGGGAGGCTGGCCGGAGCACCAGTTCACGGCGGCGGCCGCGCTGGAGAAGCACCTGAGCTCCGCCGCCGCCGCTGGTTACGGCGGCGCGCTGGCGCACCACCACCACGCCGCGGGCGCGCCGGAGCGGCTCACGGCCAACCTCTCCGACCTGGTCAGCAACTGGTCCATCGCGCCGCCCAACCACGGCCACCACGTCGGCGGCGCCGCCGCATGCGATAACCCAGCGGTGGCCGCGGCCATGGCAGCAGCCCACGGCGGCGGGAACGTGAAGCAGTCCGGCAGCAGCTTCCTTGACAGCGGCGGGGGCGGCGGCGGCGCGATGCTGCAGCAGGAGAGCAGCAGCAGCACGGGCACCGGCGGCGGCGGGCAGGACTTCCTGAGGCCGATGGGGCTTGCCGCCGGGTCGTCGTCGTACAGCTCCATGCTAGGGCTGAGCAGCAGGATGTACGGCGGCGGCGGCACGGCCACCATGGACGTGCCGTGGGGGAGCAGCAATGCCGGCGCGGCGAGGAGCCTGTCGGACCTGATATCGTTCGGCGGAGGCGCGATGGACAAGCCGCCGCCGCCGCCACCGTCGTCAGCGCCGGCGAGGACGTCGTCGGCGGACTACAAGAAGCAGCAAGGGCAGCAGGAGATCTCGTCCCCAGTGAAGACGAGCAGCAGCGGCGGTGGCGGGAAGGAGGGGAAGAAGAAGAGGTCGGAGGAGGCGGCAGGGTCGGAGGGGAGCACGAAGAAGTCCAAGCATGAGGCCACCTCTCCCACCTCTTCTCTCAAATCGCAGGTACCAAAAGTAAAGTTAGGGGACAAGATCACTGCACTGCAACAGATAGTCTCACCATTTGGAAAGACTGACACAGCATCGGTGCTATATGAGGCGATAAATTACATTAAGTGGTTGCATGAACAAGTGCAGTTGTTGAGTGACCCATACATGAAGTCGAGTAGTAGCAAGGATTACAATGCATGGGGAGGGTTGGATAGGAAGGAGAAGGCAGATGCAGAGGTTGACTTGAGAAGTAGAGGGCTGTGCTTGGTGCCTGTCTCCTGCACCCCTCAAGTGTACAGAGATAACAATGGCCCGGACTACTGGACGCCACCCTATAGAAGCTGCTTATACCGATGA
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| Protein seq | MARGAAGGEVGRSMPAVHDAHDDSENFLELLNSRTLAPELFAEPPACDYLKKMEYGGGGGGGGGGWPEHQFTAAAALEKHLSSAAAAGYGGALAHHHHAAGAPERLTANLSDLVSNWSIAPPNHGHHVGGAAACDNPAVAAAMAAAHGGGNVKQSGSSFLDSGGGGGGAMLQQESSSSTGTGGGGQDFLRPMGLAAGSSSYSSMLGLSSRMYGGGGTATMDVPWGSSNAGAARSLSDLISFGGGAMDKPPPPPPSSAPARTSSADYKKQQGQQEISSPVKTSSSGGGGKEGKKKRSEEAAGSEGSTKKSKHEATSPTSSLKSQVPKVKLGDKITALQQIVSPFGKTDTASVLYEAINYIKWLHEQVQLLSDPYMKSSSSKDYNAWGGLDRKEKADAEVDLRSRGLCLVPVSCTPQVYRDNNGPDYWTPPYRSCLYR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0471900 | RBH | 0.373688 | 0.572985 | 0.405364 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g28890 | RBH | 0.206160 | 0.348377 | 0.143379 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0014310 | SBH | 0.0 | 2.647968 | 1.132169 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0014190 | SBH | 0.000000 | 1.972387 | 1.162830 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0014170 | SBH | 0.0 | 3.161118 | 3.231754 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0014070 | SBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0014100 | SBH | 0.000000 | 9.433995 | 4.119371 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0284700 | SBH | 1.889097 | 28.392643 | 0.115213 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0014620 | SBH | 0.095750 | 0.248902 | 0.617087 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0291900 | SBH | 1.3333575 | 29.082109 | 0.9231375 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0013920 | SBH | 0.0 | 0.060123 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0014020 | SBH | 0.0 | 9.881876 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0014020 | RBH | 0.0 | 5.643557 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0014250 | SBH | 0.0 | 0.664249 | 0.248445 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0014060 | SBH | 0.0 | 1.025317 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G014010 | SBH | 0.0 | 0.000000 | 0.699530 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0013900 | SBH | 0.0 | 45.832146 | 0.000000 |
