Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os07g0438550 | OGI:07041470 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr07:14730373-14731487 | ||||||||
| Gene Symbol | SLES | ||||||||||
| DNA seq | TTACTGGAGAAGAACCCTATGCCAATATGCATTATGGCGCAATTATTGGTATGCAATTCATCCCTCATTTTCTAGGAATTGTTTGTTCTAATATGAGAATATTTCATGTGTTTTTCTTTCCTTACTGAGAAAACTAAATATTCGCCTCCTCCTGTGAATCATTGAACCTACCCCATGCTTGTGCAAATTTATATTTTTTCCTTGAGGTTTGATTCACCTATGCTACTATCTATTCATAGCTGTTCACGGCTCCATTCTGACATATCTACAAGCTTATGGCTCCTGTCACCTTATGTACAACAAAGAAGACAATTTTCCCCCATCTTTTGCAAACTGTATTAGCTTTTCTAGTGTGGGCTAAATAGTACACAAACTATTTAAGTATTAAAAAAACTTCTTCCTTTTCTGGGCAATAAAGTTAATCAGAAAATAGTGTATGATACTAGTATTCTATAAAACAATCAATTTTGCATGCTTCCTTTGCTAATTAGGCAGTCCTGAACCCTGCTGTCTTAAATTCCAAGTCACACCAGTATTGTGCTCTGGTACTCAACAATTCAACATGACTAAATAAGTCTTTTGCGGAGCATTGTACTTCCTTGAATTCAGTCCTTTTTGATGACCCTAGAACTCCCCGTTCTTGAAATGTTCTCTTCGTCCAGCAACTTATAATACGACATCTTGAAACTCCGGTTGCAGGGGGAATTGTAAACAACACATTGAGGCCACCTGTGCCAGCGTCATGTGATCCAGAGTGGAGAAGGCTTATGGAGCAGTGCTGGGCCCCAGATCCATCACAACGCCCAGCATTCACAGAGATAGCTGGACGACTCCGTGCCATGTCAGTTGCGGCAAATCAGGCAAAGGCGGCATCCAAATAAACGGCGCAGGTGGGAATACTTATGGGTTCCAGTTTGTATATTATTATTTTTGGTTGAGAATGTAATACATACATGTATTTGGTTGGAAAGTAATACATACATGTGTGCCCTATAGAGAGTGGTTTGAAAGTTAATTGCTTCTCATGGGCAAGGCTGCATCCAGTTATATACCGTTTTATTTGGGGGGTTTTATGATGTACAAAGCCTTATTTGGATTTGGAGAAACGTTATCAT
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| CDS seq | ACTGGAGAAGAACCCTATGCCAATATGCATTATGGCGCAATTATTGGGGGAATTGTAAACAACACATTGAGGCCACCTGTGCCAGCGTCATGTGATCCAGAGTGGAGAAGGCTTATGGAGCAGTGCTGGGCCCCAGATCCATCACAACGCCCAGCATTCACAGAGATAGCTGGACGACTCCGTGCCATGTCAGTTGCGGCAAATCAGGCAAAGGCGGCATCCAAATAA |
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| Protein seq | TGEEPYANMHYGAIIGGIVNNTLRPPVPASCDPEWRRLMEQCWAPDPSQRPAFTEIAGRLRAMSVAANQAKAASK |
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| Function | Dual specificity protein kinase splB [UniProtKB/Swiss-Prot:P18161] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os07g0438550 | Os07t0438550-01 | Chr07 | 14730373 | 14731487 | + | irgsp1_rep | ||
| CDS seq | ACTGGAGAAGAACCCTATGCCAATATGCATTATGGCGCAATTATTGGGGGAATTGTAAACAACACATTGAGGCCACCTGTGCCAGCGTCATGTGATCCAGAGTGGAGAAGGCTTATGGAGCAGTGCTGGGCCCCAGATCCATCACAACGCCCAGCATTCACAGAGATAGCTGGACGACTCCGTGCCATGTCAGTTGCGGCAAATCAGGCAAAGGCGGCATCCAAATAA
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| Protein seq | TGEEPYANMHYGAIIGGIVNNTLRPPVPASCDPEWRRLMEQCWAPDPSQRPAFTEIAGRLRAMSVAANQAKAASK |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0438550 | RBH | 6.981359 | 9.033873 | 15.257738 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g25680 | RBH | 5.720762 | 4.631463 | 3.001092 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0181200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0012700 | SBH | 2.134829 | 60.021778 | 16.727880 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0012530 | RBH | 0.899271 | 11.774757 | 9.068905 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0012510 | RBH | 3.744924 | 62.174416 | 33.054127 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0012420 | SBH | 0.714917 | 1.534570 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0012410 | RBH | 19.873026 | 42.944656 | 58.487064 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0246800 | RBH | 17.3105095 | 47.3001495 | 15.877175 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0012900 | RBH | 1.092560 | 3.622994 | 3.959228 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0249900 | RBH | 18.6126815 | 39.984913 | 15.276058 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0012390 | RBH | 0.999108 | 0.753872 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0012420 | RBH | 2.439081 | 31.640514 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0012360 | RBH | 16.088533 | 63.213787 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0012620 | RBH | 3.121751 | 4.174258 | 3.471736 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0012430 | SBH | 1.535272 | 34.955147 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G012400 | RBH | 2.311863 | 8.890560 | 8.696140 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0012220 | RBH | 5.634187 | 65.756729 | 22.157839 |
