Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os07g0270800 | OGI:07028980 | 15/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr07:9963285-9965579 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGGTATCTCAAATGCTCTGCAATGGTGGGAGGAGTGGCAGCTCCGGGTTCTTCTCTTGGGCAGCCTCGCTTTCCAGTACTTCCTTTTCATTACAGCCTCCCGGCATAAGTTTCCTATCCGATCCTACCTCAGATCCTTTATCTGGTTTGTATACCTCGGTAGCGATGCCCTAGCAATATATGCCCTTGCAACCCTATTTAACCGTCACAAGAAACAGGATGTTGGTCACACACACAACAACGATGTCTTAGAGATTCTTTGGGCTCCTATCCTACTGATTCACCTTGGTGGACAGGATAGCATAACTGCCTACAATATTGAAGACAATGAGCTGTGGATGCGACATGTTCTCACGGCACTGTCCCAGATCACCGTAGCCATCTATGTCTTTTGCAAATCATGGCCAGGAGGGGACAGGAGATTGTTGCAGTCGGCAATCTTGCTCTTCGTGCCTGGGATTCTCAAATGCTTGGAGAAGCCCTGGGCTCTCAATAGAGCTAGCATCAATAGCCTGGTGAGTTTTGACGAGAAAGTCCGTAGGACGATTAACAGGCAAGGCAAGCAGATTGATTCGATCGAAGATTTTGTGCGAAGTGCAAGGGGATTTTTTTGTGGAAATGATCATCTGGAGAAACCAAGTAGATCAGCGGACTTTACACCTGATGAGTTATTTGTAGACCTTGCATCTCCTTGTACTGATAATCGCGTAAGAAAACTAATGTCATTCTCAGCACTTTGTGGAGACGAAGCATATTATTTGTTACAGAACAACCTGTCCGACACCTTTGATCTACTCTATACAAAAGAAAAGATGTCCCTTAAAACTCCCCCTACCGAAGAACTTGAGACTGGCCTTCATCATTTTGTTGAATTATACAAACAGTTGAATTATACCCTATTTAGCTCTCTCAGTGAATTTTTTGGTACTGTAATACGTGAATTAGCAATGTTTCTACCATTTACGGCCATCGGCCTATTTCACCAGAGTAACAGAAAATCTTATAATGATAAAGATGTCAAGGTTACTTATGCATTGCTCTGCTGTACTGCTGTCATAGAGTTTTACAACCCTTTTGTAAAGGTATTCACAAGTGTGACACTAAACCAACGATCAAGCTCAGTTTCCAAGCTCAGTCAAAGGCCAAGGCAACGCTACCTTTACCAACATCAAGATGACATGGTTTCCCAATACAACCTATTAGGATACTTTGTTCGCAACAAAAAACATTCTACGATAATGAACTTTGTGGGATTCTTTGGGTGCAGAAACTATCTTGACCGACGTTGGCGAATGAAGTCCTGCTTTTCATCGCGCAGCATTACAAACGTAGTTCTTGGGCATGTGAAGCGTTGGTGGAAGGATCACATAACTGATGTTTTCACCTACAGGATGTTCAATGATATTAGGGGTCAATGGAGTCTCAAAGTTGAGGGTTGCTTTCAGGGATTAGGCTGGAGCTTAGAGGGAGCTTTCGATGAGAGTGTCCTTCTCTGGCATCTCGCCACGGATTTGTGCTTCTACCATATCAGTCCATCTCATGGCCGTGAACATGCCACAACAATGTGCATAGAGCGATCCTCTGGCCTCAATAATCGGTGCCCTACTTGGTGCGAAAAATCTATTCACCATAAAAATGCTGTTCAGTGCCGAGAAATGTCGAATTACATGACGTACCTACTGTTTGTCAATCCTGAGATGTTGATGCCAGGCACAAGGCGAAACCTATTCACAGACGCCTACAACGAACTGAAGGGTGTCGTCAAGGAAAAGAATCCACCACTGGATGAAAGAGAACTTGCAGAGAGAATAATCGCCGAGGTGCAGCAACAACTCGAGGAGATAACTGGGGAAGATAAGTCACCATCCAGTAAAAGAGGGCTCATTGAAGATGCTTGGTCCATTGCTGAAGAGCTCCTGAAGTTAGAAGATGACGAGAAGATGTGGAGAGTGATTGAAGGCGTATGGGTGGAGATGCTTTGCTTTTCTGCTGCCAGATGCCGAGGGTACTTGCATGCTAAGGGCCTCGGTACAGGCGTGGAGTTCCTGAGCTATGTTTGGCTACTCTTGCATTACATGGGGATGGAGACCTTGGCAGAGAAGCTGGCAAGAGGAGACCTCCAAAACAGAGGACACTCAGGTAATTTGCGGACATTCCATGTTAGAGAGTCCTCTGGTGAAGAGCAGGTTGCTGGACCATCGACTTCTTATGCTAACGGAGACAACGGTGATCAACATGTTGTTGCTCCATTCTCTGAGGATGGCTTTACCTTGGCTGGGGATGAAAATGTGTGA
More
|
||||||||||
| CDS seq | ATGGGTATCTCAAATGCTCTGCAATGGTGGGAGGAGTGGCAGCTCCGGGTTCTTCTCTTGGGCAGCCTCGCTTTCCAGTACTTCCTTTTCATTACAGCCTCCCGGCATAAGTTTCCTATCCGATCCTACCTCAGATCCTTTATCTGGTTTGTATACCTCGGTAGCGATGCCCTAGCAATATATGCCCTTGCAACCCTATTTAACCGTCACAAGAAACAGGATGTTGGTCACACACACAACAACGATGTCTTAGAGATTCTTTGGGCTCCTATCCTACTGATTCACCTTGGTGGACAGGATAGCATAACTGCCTACAATATTGAAGACAATGAGCTGTGGATGCGACATGTTCTCACGGCACTGTCCCAGATCACCGTAGCCATCTATGTCTTTTGCAAATCATGGCCAGGAGGGGACAGGAGATTGTTGCAGTCGGCAATCTTGCTCTTCGTGCCTGGGATTCTCAAATGCTTGGAGAAGCCCTGGGCTCTCAATAGAGCTAGCATCAATAGCCTGGTGAGTTTTGACGAGAAAGTCCGTAGGACGATTAACAGGCAAGGCAAGCAGATTGATTCGATCGAAGATTTTGTGCGAAGTGCAAGGGGATTTTTTTGTGGAAATGATCATCTGGAGAAACCAAGTAGATCAGCGGACTTTACACCTGATGAGTTATTTGTAGACCTTGCATCTCCTTGTACTGATAATCGCGTAAGAAAACTAATGTCATTCTCAGCACTTTGTGGAGACGAAGCATATTATTTGTTACAGAACAACCTGTCCGACACCTTTGATCTACTCTATACAAAAGAAAAGATGTCCCTTAAAACTCCCCCTACCGAAGAACTTGAGACTGGCCTTCATCATTTTGTTGAATTATACAAACAGTTGAATTATACCCTATTTAGCTCTCTCAGTGAATTTTTTGGTACTGTAATACGTGAATTAGCAATGTTTCTACCATTTACGGCCATCGGCCTATTTCACCAGAGTAACAGAAAATCTTATAATGATAAAGATGTCAAGGTTACTTATGCATTGCTCTGCTGTACTGCTGTCATAGAGTTTTACAACCCTTTTGTAAAGGTATTCACAAGTGTGACACTAAACCAACGATCAAGCTCAGTTTCCAAGCTCAGTCAAAGGCCAAGGCAACGCTACCTTTACCAACATCAAGATGACATGGTTTCCCAATACAACCTATTAGGATACTTTGTTCGCAACAAAAAACATTCTACGATAATGAACTTTGTGGGATTCTTTGGGTGCAGAAACTATCTTGACCGACGTTGGCGAATGAAGTCCTGCTTTTCATCGCGCAGCATTACAAACGTAGTTCTTGGGCATGTGAAGCGTTGGTGGAAGGATCACATAACTGATGTTTTCACCTACAGGATGTTCAATGATATTAGGGGTCAATGGAGTCTCAAAGTTGAGGGTTGCTTTCAGGGATTAGGCTGGAGCTTAGAGGGAGCTTTCGATGAGAGTGTCCTTCTCTGGCATCTCGCCACGGATTTGTGCTTCTACCATATCAGTCCATCTCATGGCCGTGAACATGCCACAACAATGTGCATAGAGCGATCCTCTGGCCTCAATAATCGGTGCCCTACTTGGTGCGAAAAATCTATTCACCATAAAAATGCTGTTCAGTGCCGAGAAATGTCGAATTACATGACGTACCTACTGTTTGTCAATCCTGAGATGTTGATGCCAGGCACAAGGCGAAACCTATTCACAGACGCCTACAACGAACTGAAGGGTGTCGTCAAGGAAAAGAATCCACCACTGGATGAAAGAGAACTTGCAGAGAGAATAATCGCCGAGGTGCAGCAACAACTCGAGGAGATAACTGGGGAAGATAAGTCACCATCCAGTAAAAGAGGGCTCATTGAAGATGCTTGGTCCATTGCTGAAGAGCTCCTGAAGTTAGAAGATGACGAGAAGATGTGGAGAGTGATTGAAGGCGTATGGGTGGAGATGCTTTGCTTTTCTGCTGCCAGATGCCGAGGGTACTTGCATGCTAAGGGCCTCGGTACAGGCGTGGAGTTCCTGAGCTATGTTTGGCTACTCTTGCATTACATGGGGATGGAGACCTTGGCAGAGAAGCTGGCAAGAGGAGACCTCCAAAACAGAGGACACTCAGGTAATTTGCGGACATTCCATGTTAGAGAGTCCTCTGGTGAAGAGCAGGTTGCTGGACCATCGACTTCTTATGCTAACGGAGACAACGGTGATCAACATGTTGTTGCTCCATTCTCTGAGGATGGCTTTACCTTGGCTGGGGATGAAAATGTGTGA
More
|
||||||||||
| Protein seq | MGISNALQWWEEWQLRVLLLGSLAFQYFLFITASRHKFPIRSYLRSFIWFVYLGSDALAIYALATLFNRHKKQDVGHTHNNDVLEILWAPILLIHLGGQDSITAYNIEDNELWMRHVLTALSQITVAIYVFCKSWPGGDRRLLQSAILLFVPGILKCLEKPWALNRASINSLVSFDEKVRRTINRQGKQIDSIEDFVRSARGFFCGNDHLEKPSRSADFTPDELFVDLASPCTDNRVRKLMSFSALCGDEAYYLLQNNLSDTFDLLYTKEKMSLKTPPTEELETGLHHFVELYKQLNYTLFSSLSEFFGTVIRELAMFLPFTAIGLFHQSNRKSYNDKDVKVTYALLCCTAVIEFYNPFVKVFTSVTLNQRSSSVSKLSQRPRQRYLYQHQDDMVSQYNLLGYFVRNKKHSTIMNFVGFFGCRNYLDRRWRMKSCFSSRSITNVVLGHVKRWWKDHITDVFTYRMFNDIRGQWSLKVEGCFQGLGWSLEGAFDESVLLWHLATDLCFYHISPSHGREHATTMCIERSSGLNNRCPTWCEKSIHHKNAVQCREMSNYMTYLLFVNPEMLMPGTRRNLFTDAYNELKGVVKEKNPPLDERELAERIIAEVQQQLEEITGEDKSPSSKRGLIEDAWSIAEELLKLEDDEKMWRVIEGVWVEMLCFSAARCRGYLHAKGLGTGVEFLSYVWLLLHYMGMETLAEKLARGDLQNRGHSGNLRTFHVRESSGEEQVAGPSTSYANGDNGDQHVVAPFSEDGFTLAGDENV |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os07g0270800 | Os07t0270800-00 | Chr07 | 9963285 | 9965579 | + | irgsp1_rep | ||
| CDS seq | ATGGGTATCTCAAATGCTCTGCAATGGTGGGAGGAGTGGCAGCTCCGGGTTCTTCTCTTGGGCAGCCTCGCTTTCCAGTACTTCCTTTTCATTACAGCCTCCCGGCATAAGTTTCCTATCCGATCCTACCTCAGATCCTTTATCTGGTTTGTATACCTCGGTAGCGATGCCCTAGCAATATATGCCCTTGCAACCCTATTTAACCGTCACAAGAAACAGGATGTTGGTCACACACACAACAACGATGTCTTAGAGATTCTTTGGGCTCCTATCCTACTGATTCACCTTGGTGGACAGGATAGCATAACTGCCTACAATATTGAAGACAATGAGCTGTGGATGCGACATGTTCTCACGGCACTGTCCCAGATCACCGTAGCCATCTATGTCTTTTGCAAATCATGGCCAGGAGGGGACAGGAGATTGTTGCAGTCGGCAATCTTGCTCTTCGTGCCTGGGATTCTCAAATGCTTGGAGAAGCCCTGGGCTCTCAATAGAGCTAGCATCAATAGCCTGGTGAGTTTTGACGAGAAAGTCCGTAGGACGATTAACAGGCAAGGCAAGCAGATTGATTCGATCGAAGATTTTGTGCGAAGTGCAAGGGGATTTTTTTGTGGAAATGATCATCTGGAGAAACCAAGTAGATCAGCGGACTTTACACCTGATGAGTTATTTGTAGACCTTGCATCTCCTTGTACTGATAATCGCGTAAGAAAACTAATGTCATTCTCAGCACTTTGTGGAGACGAAGCATATTATTTGTTACAGAACAACCTGTCCGACACCTTTGATCTACTCTATACAAAAGAAAAGATGTCCCTTAAAACTCCCCCTACCGAAGAACTTGAGACTGGCCTTCATCATTTTGTTGAATTATACAAACAGTTGAATTATACCCTATTTAGCTCTCTCAGTGAATTTTTTGGTACTGTAATACGTGAATTAGCAATGTTTCTACCATTTACGGCCATCGGCCTATTTCACCAGAGTAACAGAAAATCTTATAATGATAAAGATGTCAAGGTTACTTATGCATTGCTCTGCTGTACTGCTGTCATAGAGTTTTACAACCCTTTTGTAAAGGTATTCACAAGTGTGACACTAAACCAACGATCAAGCTCAGTTTCCAAGCTCAGTCAAAGGCCAAGGCAACGCTACCTTTACCAACATCAAGATGACATGGTTTCCCAATACAACCTATTAGGATACTTTGTTCGCAACAAAAAACATTCTACGATAATGAACTTTGTGGGATTCTTTGGGTGCAGAAACTATCTTGACCGACGTTGGCGAATGAAGTCCTGCTTTTCATCGCGCAGCATTACAAACGTAGTTCTTGGGCATGTGAAGCGTTGGTGGAAGGATCACATAACTGATGTTTTCACCTACAGGATGTTCAATGATATTAGGGGTCAATGGAGTCTCAAAGTTGAGGGTTGCTTTCAGGGATTAGGCTGGAGCTTAGAGGGAGCTTTCGATGAGAGTGTCCTTCTCTGGCATCTCGCCACGGATTTGTGCTTCTACCATATCAGTCCATCTCATGGCCGTGAACATGCCACAACAATGTGCATAGAGCGATCCTCTGGCCTCAATAATCGGTGCCCTACTTGGTGCGAAAAATCTATTCACCATAAAAATGCTGTTCAGTGCCGAGAAATGTCGAATTACATGACGTACCTACTGTTTGTCAATCCTGAGATGTTGATGCCAGGCACAAGGCGAAACCTATTCACAGACGCCTACAACGAACTGAAGGGTGTCGTCAAGGAAAAGAATCCACCACTGGATGAAAGAGAACTTGCAGAGAGAATAATCGCCGAGGTGCAGCAACAACTCGAGGAGATAACTGGGGAAGATAAGTCACCATCCAGTAAAAGAGGGCTCATTGAAGATGCTTGGTCCATTGCTGAAGAGCTCCTGAAGTTAGAAGATGACGAGAAGATGTGGAGAGTGATTGAAGGCGTATGGGTGGAGATGCTTTGCTTTTCTGCTGCCAGATGCCGAGGGTACTTGCATGCTAAGGGCCTCGGTACAGGCGTGGAGTTCCTGAGCTATGTTTGGCTACTCTTGCATTACATGGGGATGGAGACCTTGGCAGAGAAGCTGGCAAGAGGAGACCTCCAAAACAGAGGACACTCAGGTAATTTGCGGACATTCCATGTTAGAGAGTCCTCTGGTGAAGAGCAGGTTGCTGGACCATCGACTTCTTATGCTAACGGAGACAACGGTGATCAACATGTTGTTGCTCCATTCTCTGAGGATGGCTTTACCTTGGCTGGGGATGAAAATGTGTGA
More
|
|||||||
| Protein seq | MGISNALQWWEEWQLRVLLLGSLAFQYFLFITASRHKFPIRSYLRSFIWFVYLGSDALAIYALATLFNRHKKQDVGHTHNNDVLEILWAPILLIHLGGQDSITAYNIEDNELWMRHVLTALSQITVAIYVFCKSWPGGDRRLLQSAILLFVPGILKCLEKPWALNRASINSLVSFDEKVRRTINRQGKQIDSIEDFVRSARGFFCGNDHLEKPSRSADFTPDELFVDLASPCTDNRVRKLMSFSALCGDEAYYLLQNNLSDTFDLLYTKEKMSLKTPPTEELETGLHHFVELYKQLNYTLFSSLSEFFGTVIRELAMFLPFTAIGLFHQSNRKSYNDKDVKVTYALLCCTAVIEFYNPFVKVFTSVTLNQRSSSVSKLSQRPRQRYLYQHQDDMVSQYNLLGYFVRNKKHSTIMNFVGFFGCRNYLDRRWRMKSCFSSRSITNVVLGHVKRWWKDHITDVFTYRMFNDIRGQWSLKVEGCFQGLGWSLEGAFDESVLLWHLATDLCFYHISPSHGREHATTMCIERSSGLNNRCPTWCEKSIHHKNAVQCREMSNYMTYLLFVNPEMLMPGTRRNLFTDAYNELKGVVKEKNPPLDERELAERIIAEVQQQLEEITGEDKSPSSKRGLIEDAWSIAEELLKLEDDEKMWRVIEGVWVEMLCFSAARCRGYLHAKGLGTGVEFLSYVWLLLHYMGMETLAEKLARGDLQNRGHSGNLRTFHVRESSGEEQVAGPSTSYANGDNGDQHVVAPFSEDGFTLAGDENV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0270800 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g16930 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0268800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0009890 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0010020 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0009940 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0009620 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0009850 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0178300 | RBH | 0 | 0 | 0.0719315 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0010310 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0175400 | RBH | 0 | 0 | 0.249446 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0009780 | RBH | 0.0 | 0.051810 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0009830 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0009780 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0009970 | RBH | 0.476484 | 1.272620 | 1.943900 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0009860 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G009820 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0009690 | RBH | 0.0 | 0.0 | 0.0 |
