Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os07g0242400 OGI:07023120 | 16/16 Nipponbare | IRGSP 1.0 | RAP-db Chr07:7938936-7941316
Gene Symbol OsFbox356, Os_F0118
DNA seq

GAACCGAAAACATTTTTTTGGAACCGATATCATTATGATCCGTCTTTGAAAGAAAGCCAACACGGGGACAGGGATTTCTTTAGAGATTCACAAACAATAATTAAAAGCAGCATACTGTGGATTCCAGTTTTAGGTAGAAAATACCATGGAACAACCCACAGGTCCAAAAACTATTCACTAGCTGCATAACTGAACCATCTGCAGAACCAAGAAAAATAACACCCCAGTAGCTTGCACGACAGTAGCCTGTCCAAGAGTGTTATAGTTTTCAGGAGCGGCCTCAAATTCTCCAGTATGCAATCACACCAGTCCTGACATCGGTTTTGCTCCTCTTCTTTTGGCACTTCTTCCATTTCTGCAGGAAGAAAATTATTTTGTACAACGCATTCAGGAGAGATTTGGCAATTAACTTCATTGAACACAAAAACATAACCACAATAACCAGCAAACAGTTTGCTAAAATAGTAGGCCGAAAATTACTATGGTTCTTATTCCATTTCAAATGCAAAATTTACTATGAAAAAAACTTGATAGAACTATTATGCACCTTTATATTCAAATGCAAATCCACACAAAAGGCCCTCCCATTATTTTTTTTATCAACATGTCGAGAAGATATGTGCTCATTCAAATTAAAAAGACCCTCCTTAAACACCAAGTTTAGCAAGAATTGCCAATTGCCAGCAATGCAAAATTACCAATTTACAATACATCTAAATTAATAGAGTATATGATTTTAAGTGTTTGAGTAACGATTGAAGTCCTTATATTCCTGAAACAAATAATCAAACTATATAGGCCCATTTCCTAATTTCAGTTGGATATCATCTTATTTCGATGAGCATATGGAAGCTTTTAGCATAAAAGATACAAGTAGAAGATGAATTTGCAATGAAATTTGTAGAACTGCATTTGTGACAGATAAGTAAATGACAAAATGATGCTGTTTATCAAATCACGGCATGAATACCAATTATGTGATGATACGAAACCAAACTTTACCTTGTCACATACTCTGTGGACATAATTGATTTCCAGTATATACACCTACTCCAGTAAAGATACTAGCCTTTGTCTGAACTATCTCTGAGGAAGTGTTGGTTACTGGATTATAAATCCAGACCATCCCTTTTGATCCTATCTGCACCCAAAGTACCACATTTCCCTCATCCGTCACAAGCAAAGGTTGCACACCATCTCCAAAACCATCAAAAGCAAATTCAACATTTATCCTATATTCTTTGGACCACATACCATTCTCAAAATCAACTAGAAACCATAAGTCCACCGCAGAAATTTGATCATTGAAATGTGCTGTACACAAAGTTCCTTCAAGTTGGGCTAACATAAGACGATCGGTAAGGTCAGCATAGTTGAGTGTGCCATTCGCTTCCTCAAGAATTCTGTTTACTGGCCCTTGGAGAGCCGTGCTCCACTGCTCCGTCGCAAGGTCGAAGGAAGGTATGCAGCCCGTAGCAAAATAGTAGGAGGGATCCATTTGCCAGTGATCCAAGAAGAAGTAAGCAGCCCCTTCGAAGACAACTCCATTGGTGCAGCTCGGATCAAGATACCCCGGTGGACTCTCCATCTTCCTCCACCGTCCATTCATGTCGCCGATTGCGAAAACCTCACACACTGGATCAGCCTCATATCCATCCTCCAAGTCCTCTAGAATCCGGAGTAGTTTGTACTCTCCTGTGGAATTCGTCTGACCAAATGCAAACCAGGCTGGCCTCATCCCGTTGCGACGCACCATATCCTCTGCAATGCCGAAGGGCAAGGCGGAGACGGATCCTGTGGCGGGGTCGAGCACGCTGACGCGGTGGTGCTCCCCGGCGACGAGGACACGGTCGTAGCTCGCCGTCAGCACCCTGCACTCGCCGCCCACGCCGAGGATCTCCTCGACGACGTTGCCGGACAGGTCCACGAGATCAACGCAGCATCGACTGGGGAAGCTGTCAACCAAGACGGCGAGGAGCGGGTGAGGGTGGACGGCGGCGTAGGCGGCGAGGAAGAGCCGGTCCGTGGTGAAGGACAGCCACGAGCGGCAGACGGCGCGGAGGCGGCAGATCGGCTTGGCGGGGAGGCGCAGCAGGACCTCGAGCAGCAGCTCCGGGGGCAGGACGCCGTCCACGGCTCCGAACCCGCTTCCCGGTGCGGCGGCGGCGGCGCACGGCTCTGGGGACGCCATCGCGGACGCCTGGATTGGGGGTCAAAACCGGATGAAAACTTGAACCAATCAGTGCGAGAAGAAGGACGAGTTCTCTGCCATCAAGGAGAAGGGTTTACCTCGAGCGGAGCGCGGTGGCCAGCCGGAGTCCAGCACGGCGGCGGCGGCGGCGGCGGTGGCGCCGTCTCTCGTCTCTCGCCGGGATGTGTCT

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CDS seq

ACACATCCCGGCGAGAGACGAGAGACGGCGCCACCGCCGCCGCCGCCGCCGCCGTGCTGGACTCCGGCTGGCCACCGCGCTCCGCTCGAGGCGTCCGCGATGGCGTCCCCAGAGCCGTGCGCCGCCGCCGCCGCACCGGGAAGCGGGTTCGGAGCCGTGGACGGCGTCCTGCCCCCGGAGCTGCTGCTCGAGGTCCTGCTGCGCCTCCCCGCCAAGCCGATCTGCCGCCTCCGCGCCGTCTGCCGCTCGTGGCTGTCCTTCACCACGGACCGGCTCTTCCTCGCCGCCTACGCCGCCGTCCACCCTCACCCGCTCCTCGCCGTCTTGGTTGACAGCTTCCCCAGTCGATGCTGCGTTGATCTCGTGGACCTGTCCGGCAACGTCGTCGAGGAGATCCTCGGCGTGGGCGGCGAGTGCAGGGTGCTGACGGCGAGCTACGACCGTGTCCTCGTCGCCGGGGAGCACCACCGCGTCAGCGTGCTCGACCCCGCCACAGGATCCGTCTCCGCCTTGCCCTTCGGCATTGCAGAGGATATGGTGCGTCGCAACGGGATGAGGCCAGCCTGGTTTGCATTTGGTCAGACGAATTCCACAGGAGAGTACAAACTACTCCGGATTCTAGAGGACTTGGAGGATGGATATGAGGCTGATCCAGTGTGTGAGGTTTTCGCAATCGGCGACATGAATGGACGGTGGAGGAAGATGGAGAGTCCACCGGGGTATCTTGATCCGAGCTGCACCAATGGAGTTGTCTTCGAAGGGGCTGCTTACTTCTTCTTGGATCACTGGCAAATGGATCCCTCCTACTATTTTGCTACGGGCTGCATACCTTCCTTCGACCTTGCGACGGAGCAGTGGAGCACGGCTCTCCAAGGGCCAGTAAACAGAATTCTTGAGGAAGCGAATGGCACACTCAACTATGCTGACCTTACCGATCGTCTTATGTTAGCCCAACTTGAAGGAACTTTGTGTACAGCACATTTCAATGATCAAATTTCTGCGGTGGACTTATGGTTTCTAGTTGATTTTGAGAATGGTATGTGGTCCAAAGAATATAGGATAAATGTTGAATTTGCTTTTGATGGTTTTGGAGATGGTGTGCAACCTTTGCTTGTGACGGATGAGGGAAATGTGGTACTTTGGGTGCAGATAGGATCAAAAGGGATGGTCTGGATTTATAATCCAGTAACCAACACTTCCTCAGAGATAGTTCAGACAAAGGCTAGTATCTTTACTGGAGTAGGTGTATATACTGGAAATCAATTATGTCCACAGAGTATGTGA

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Protein seq

THPGERRETAPPPPPPPPCWTPAGHRAPLEASAMASPEPCAAAAAPGSGFGAVDGVLPPELLLEVLLRLPAKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLVDSFPSRCCVDLVDLSGNVVEEILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRPAWFAFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAIGDMNGRWRKMESPPGYLDPSCTNGVVFEGAAYFFLDHWQMDPSYYFATGCIPSFDLATEQWSTALQGPVNRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDFENGMWSKEYRINVEFAFDGFGDGVQPLLVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQSM

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os07g0242400 Os07t0242400-01 Chr07 7938936 7941316 - irgsp1_rep
CDS seq

ACACATCCCGGCGAGAGACGAGAGACGGCGCCACCGCCGCCGCCGCCGCCGCCGTGCTGGACTCCGGCTGGCCACCGCGCTCCGCTCGAGGCGTCCGCGATGGCGTCCCCAGAGCCGTGCGCCGCCGCCGCCGCACCGGGAAGCGGGTTCGGAGCCGTGGACGGCGTCCTGCCCCCGGAGCTGCTGCTCGAGGTCCTGCTGCGCCTCCCCGCCAAGCCGATCTGCCGCCTCCGCGCCGTCTGCCGCTCGTGGCTGTCCTTCACCACGGACCGGCTCTTCCTCGCCGCCTACGCCGCCGTCCACCCTCACCCGCTCCTCGCCGTCTTGGTTGACAGCTTCCCCAGTCGATGCTGCGTTGATCTCGTGGACCTGTCCGGCAACGTCGTCGAGGAGATCCTCGGCGTGGGCGGCGAGTGCAGGGTGCTGACGGCGAGCTACGACCGTGTCCTCGTCGCCGGGGAGCACCACCGCGTCAGCGTGCTCGACCCCGCCACAGGATCCGTCTCCGCCTTGCCCTTCGGCATTGCAGAGGATATGGTGCGTCGCAACGGGATGAGGCCAGCCTGGTTTGCATTTGGTCAGACGAATTCCACAGGAGAGTACAAACTACTCCGGATTCTAGAGGACTTGGAGGATGGATATGAGGCTGATCCAGTGTGTGAGGTTTTCGCAATCGGCGACATGAATGGACGGTGGAGGAAGATGGAGAGTCCACCGGGGTATCTTGATCCGAGCTGCACCAATGGAGTTGTCTTCGAAGGGGCTGCTTACTTCTTCTTGGATCACTGGCAAATGGATCCCTCCTACTATTTTGCTACGGGCTGCATACCTTCCTTCGACCTTGCGACGGAGCAGTGGAGCACGGCTCTCCAAGGGCCAGTAAACAGAATTCTTGAGGAAGCGAATGGCACACTCAACTATGCTGACCTTACCGATCGTCTTATGTTAGCCCAACTTGAAGGAACTTTGTGTACAGCACATTTCAATGATCAAATTTCTGCGGTGGACTTATGGTTTCTAGTTGATTTTGAGAATGGTATGTGGTCCAAAGAATATAGGATAAATGTTGAATTTGCTTTTGATGGTTTTGGAGATGGTGTGCAACCTTTGCTTGTGACGGATGAGGGAAATGTGGTACTTTGGGTGCAGATAGGATCAAAAGGGATGGTCTGGATTTATAATCCAGTAACCAACACTTCCTCAGAGATAGTTCAGACAAAGGCTAGTATCTTTACTGGAGTAGGTGTATATACTGGAAATCAATTATGTCCACAGAGTATGTGA

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Protein seq

THPGERRETAPPPPPPPPCWTPAGHRAPLEASAMASPEPCAAAAAPGSGFGAVDGVLPPELLLEVLLRLPAKPICRLRAVCRSWLSFTTDRLFLAAYAAVHPHPLLAVLVDSFPSRCCVDLVDLSGNVVEEILGVGGECRVLTASYDRVLVAGEHHRVSVLDPATGSVSALPFGIAEDMVRRNGMRPAWFAFGQTNSTGEYKLLRILEDLEDGYEADPVCEVFAIGDMNGRWRKMESPPGYLDPSCTNGVVFEGAAYFFLDHWQMDPSYYFATGCIPSFDLATEQWSTALQGPVNRILEEANGTLNYADLTDRLMLAQLEGTLCTAHFNDQISAVDLWFLVDFENGMWSKEYRINVEFAFDGFGDGVQPLLVTDEGNVVLWVQIGSKGMVWIYNPVTNTSSEIVQTKASIFTGVGVYTGNQLCPQSM

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0242400 RBH 0.0 0.0 0.721889
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g13870 RBH 0.0 0.0 0.185602
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0008610 RBH 0.000000 1.257977 0.912091
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0008720 RBH 0.0 1.936625 0.386717
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0008550 RBH 0.0 1.741357 1.194350
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0008350 RBH 0.0 0.064984 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0008490 RBH 0.912674 0.000000 12.786172
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0137500 RBH 0.98382 2.9583005 6.404438
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0008980 RBH 0.042002 0.209578 0.811103
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0139100 RBH 1.619566 4.837988 9.8072955
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0008450 RBH 0.076779 0.056306 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0008470 RBH 0.177356 21.922144 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0008460 RBH 3.995538 7.558509 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0008640 RBH 0.0 0.000000 0.317393
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0008520 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G008520 RBH 0.075160 0.999404 0.635161
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0008430 RBH 0.0 3.190505 0.727447
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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