Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os07g0104100 | OGI:07000530 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr07:236594-237329 | ||||||||
| Gene Symbol | prx97, Osprx97, prx94 | ||||||||||
| DNA seq | GCCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCACTTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATTGACGTGCTCACCGGGGCGCAGGGCGAGATCAGGAACAAGTGCTACGCCATCAACATATAATAAAGTAACTGCATCTGCATGCATGCGCACTAATCAAAGGTTCGATTTATTTGGTTTCTTCCGTCAATTTTTTTTAATTGGTTTCAGTTTATTTGCAAAAAAGATCGTGTTAATTTGGTTTGGGTACAGTACAGATGAACGAATCCATCACTGCGTACTATGTATATGTGTGTAACTGATGTACTATGTACGTAGATTGCATGCCAATGGGTTTCTTGTTTTGCT
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| CDS seq | CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCACTTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATTGACGTGCTCACCGGGGCGCAGGGCGAGATCAGGAACAAGTGCTACGCCATCAACATATAA
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| Protein seq | PPPTANFTQLSQMFAAKGLDAKDLVVLSGGHTLGTAHCALFSDRLYNFTGLVNDGDVDPALDAAYMAKLKAKCRSLSDNTTLSEMDPGSFLTFDASYYRLVAKRRGIFHSDSALLTDPVTRAYVERQATGHFADDFFRDFADSMVKMSTIDVLTGAQGEIRNKCYAINI |
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| Function | Peroxidase 1 [UniProtKB/Swiss-Prot:P37834] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os07g0104100 | Os07t0104100-01 | Chr07 | 236594 | 237329 | + | irgsp1_rep | ||
| CDS seq | CCGCCCCCCACCGCCAACTTCACCCAGCTCTCCCAGATGTTCGCCGCCAAAGGCCTCGACGCCAAGGACCTCGTCGTCCTCTCCGGCGGCCACACGCTCGGCACGGCGCACTGCGCGCTCTTCTCCGACCGCCTCTACAACTTCACCGGCCTGGTGAACGACGGCGACGTGGACCCGGCGCTGGACGCGGCGTACATGGCGAAGCTCAAGGCCAAGTGCCGGAGCCTGAGCGACAACACCACCCTGTCGGAGATGGACCCCGGCAGCTTCCTCACCTTCGACGCCAGCTACTACCGGCTGGTGGCCAAGCGCCGCGGCATCTTCCACTCCGACTCCGCGCTGCTCACCGATCCCGTCACCAGGGCCTACGTCGAGCGCCAGGCCACCGGCCACTTCGCCGACGACTTCTTCCGCGACTTCGCCGACTCCATGGTGAAGATGAGCACCATTGACGTGCTCACCGGGGCGCAGGGCGAGATCAGGAACAAGTGCTACGCCATCAACATATAA
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| Protein seq | PPPTANFTQLSQMFAAKGLDAKDLVVLSGGHTLGTAHCALFSDRLYNFTGLVNDGDVDPALDAAYMAKLKAKCRSLSDNTTLSEMDPGSFLTFDASYYRLVAKRRGIFHSDSALLTDPVTRAYVERQATGHFADDFFRDFADSMVKMSTIDVLTGAQGEIRNKCYAINI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0104100 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g01370 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0000280 | RBH | 0.0 | 38.008358 | 4.438465 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017540 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017500 | SBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017400 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0000280 | RBH | 0.0 | 16.430176 | 4.520131 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0003500 | RBH | 0.288125 | 0.0730545 | 0.4210295 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0000280 | SBH | 0.0 | 0.675968 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0002500 | RBH | 7.4058845 | 0.071056 | 0.991121 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0000280 | RBH | 0.0 | 0.246635 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0000300 | RBH | 0.0 | 2.871957 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0000300 | RBH | 0.000000 | 21.520962 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0000310 | RBH | 0.0 | 1.951701 | 0.863090 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0000300 | RBH | 0.0 | 8.834372 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G000290 | RBH | 0.0 | 0.606289 | 2.353158 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0000290 | RBH | 0.0 | 13.363930 | 1.588605 |
