Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os06g0662200 | OGI:06076910 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr06:27299932-27302104 | ||||||||
| Gene Symbol | RISBZ5, OsbZIP52, bZIP52 | ||||||||||
| DNA seq | AGTGATAATTTTCATCGTAATTGTCACATATTTGTTTAGGAATTATAGTACACCGTAATTTTGCAGTCGTTTACTATTACAACTGCCATGAAAAGTGGCACATTTCACACCGATGCTATGCGCACCAGAAGCACCAGAGCTACGCCAAGAACTGAACCAATGCAGGACTGTTGAAGTATACTGAACAGATCAATTCGTAACAGATGTTACAGAGCGTATACACCAAAGGCGCTGACGACTAGAGGTGATCAAAATCAAACTATTATACTTATACCAATCAAATTTCGATCAGATTTATACCAATCAAATTTCGATCAGATGGCCTTGATTGCCGCAGATCAAACGCACTAAAACATAGTTCTTCAGCACCAAAACACCAGAAATACTTGCCTCAGACTGTAGTACCTAGTACTTAGCAGCTTGTCAGTTATGCACATGCACCTAGTAACAGAGGATACCGTATTACTTTACATATAGGTTCTGATGGAGATTTGTTTGGGAAGGTTTCTGTCAGCTACACCTTCTCGCATAATTTTTTATCTGTCCCAAACGATTTAGATTCTCTCCCAGATTTTGAGCATTAGTAGCCAGAGAATTCAAACATAAACTAAAAATAGGAAACTGAACAACTAGCCTTTTCAGATTCTCACCGGCTGCTTCTTAGAATCTCAAGCTCTCTCGAACACGGATGAAGTGTCTTAAGGCCACACATCAGCCGAGCAGCTGGTCACCTCGCTGGATATCCGGTTGTCCAGGCTCTCTAGGCTTGCAGCGCTTTGAACCGGTGAGTTCTGAACCTGTCGACCCAGGTTCAAGCCTTTGAAACCACAGGCATCGTTCCGTGGTAAACTGAGCATATCCAAAGCTTGGCACATCTTCCTGGAGCTGAGCAATGGCGCCAGCCCGAGCTGGCCCAGGCCACACGACATCGCGGCCCTCGCGACCATGTCTTCAGCCATCTTGACCTGGGATCGAAGCCAAGAATTGGTAAGTTTGGAGAGATGCCGGAAGCCGATCATCAGAAACAATTAACTATTTACCACTCTTACGAGTGACAATTTGCAATTGGACTCACATGTCATAGACACATAAAGTGATAAAGACCCATATGTTGTCATAGACTATGGGTGGTAAATTCTTAATTACCTCATCTTAAAAGTGGCGAAAAGTTAAATGCGCCGATAATTGGTGGCTGAAGGAGAGTTTGGTTTCTAATTACCTTGACTCTTAAGGCCTCTACATCCGATTTGAGGATCCTGTTGTCCGTGACCGCTGTATTGAACTGCTGGCTGGACTCTGTGAGCTGCTTGAAGAGGGATGAGTTTTCGCCTTTGAGTTGCTCGACCTGATCATAGATGGATTGCTGTAAGATCACACTGATATTTGCATCAACGCATCTGGAAATTTGAACTTTGAAGTTTATAATACCTGTGATTCGAGTTCAGATAACTGTGCCTGCTTTCTCCTCCTGGATCGTCGAGCGGACTCCCTGTTGGACACCATCCTGAAATTCGAACAAGCAGTTCATAAGAATGCGTTCTCTGTTCAAATTTGTTGCATTTGCTAGAAATCAAGATTGATCGATCACTATGTACCTTCTTATTCGCTTTGTTTCTGTGGATTTCGTGCCACGCAGGCGTGGACTCCTCTCTGCTTCTAACAGCGAATCGCAATCGGAGTCCGAGTCGCTTTCAGGCGCGTGGTTCGCTGAGGTGGTTGGTTTGGGGTCATCTGCAACCAAAATGAACCCAACATGTGATGAATTTGACTAAATTTGGGTGTGTTTCATAACTCCAAATAAACGCATAGAAAATGGGCTGTTTGCACAATAGCTCTGTAACTCAAAAAAACTCAAATTATGTCATGTGTACCTACCGGAGATGGACGCCGGCGTCCGCTCGTCGGCCGTGGCCGAGAAGGCGGCGGCGGCGCGCGGCGGCGTACGGACGCTCTCCGGCCACCACAGCTGGTGGCCGCCGCCGCTTCCGTCCAGTGTACTCTGATCCAACACGGACATCTCGCCGTCGCCGGGAGAGAACAGGCCGGACTTACGCGCGCCGTCGCCGGGAGATAACACGCCGGGCTTGCGGTCGCCGGCGCCGGCCTCCTCCCGGATGAACGCCTCCAGCTGCAGCTCCGACGGGCACTTCTTCATCATCGCCTTCCTCCGACC
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| CDS seq | ATGATGAAGAAGTGCCCGTCGGAGCTGCAGCTGGAGGCGTTCATCCGGGAGGAGGCCGGCGCCGGCGACCGCAAGCCCGGCGTGTTATCTCCCGGCGACGGCGCGCGTAAGTCCGGCCTGTTCTCTCCCGGCGACGGCGAGATGTCCGTGTTGGATCAGAGTACACTGGACGGAAGCGGCGGCGGCCACCAGCTGTGGTGGCCGGAGAGCGTCCGTACGCCGCCGCGCGCCGCCGCCGCCTTCTCGGCCACGGCCGACGAGCGGACGCCGGCGTCCATCTCCGATGACCCCAAACCAACCACCTCAGCGAACCACGCGCCTGAAAGCGACTCGGACTCCGATTGCGATTCGCTGTTAGAAGCAGAGAGGAGTCCACGCCTGCGTGGCACGAAATCCACAGAAACAAAGCGAATAAGAAGGATGGTGTCCAACAGGGAGTCCGCTCGACGATCCAGGAGGAGAAAGCAGGCACAGTTATCTGAACTCGAATCACAGGTCGAGCAACTCAAAGGCGAAAACTCATCCCTCTTCAAGCAGCTCACAGAGTCCAGCCAGCAGTTCAATACAGCGGTCACGGACAACAGGATCCTCAAATCGGATGTAGAGGCCTTAAGAGTCAAGGTCAAGATGGCTGAAGACATGGTCGCGAGGGCCGCGATGTCGTGTGGCCTGGGCCAGCTCGGGCTGGCGCCATTGCTCAGCTCCAGGAAGATGTGCCAAGCTTTGGATATGCTCAGTTTACCACGGAACGATGCCTGTGGTTTCAAAGGCTTGAACCTGGGTCGACAGGTTCAGAACTCACCGGTTCAAAGCGCTGCAAGCCTAGAGAGCCTGGACAACCGGATATCCAGCGAGGTGACCAGCTGCTCGGCTGATGTGTGGCCTTAA
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| Protein seq | MMKKCPSELQLEAFIREEAGAGDRKPGVLSPGDGARKSGLFSPGDGEMSVLDQSTLDGSGGGHQLWWPESVRTPPRAAAAFSATADERTPASISDDPKPTTSANHAPESDSDSDCDSLLEAERSPRLRGTKSTETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQFNTAVTDNRILKSDVEALRVKVKMAEDMVARAAMSCGLGQLGLAPLLSSRKMCQALDMLSLPRNDACGFKGLNLGRQVQNSPVQSAASLESLDNRISSEVTSCSADVWP |
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| Function | bZIP transcription factor RISBZ5 [UniProtKB/Swiss-Prot:Q654B3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os06g0662200 | Os06t0662200-01 | Chr06 | 27299932 | 27302104 | - | irgsp1_rep | ||
| CDS seq | ATGATGAAGAAGTGCCCGTCGGAGCTGCAGCTGGAGGCGTTCATCCGGGAGGAGGCCGGCGCCGGCGACCGCAAGCCCGGCGTGTTATCTCCCGGCGACGGCGCGCGTAAGTCCGGCCTGTTCTCTCCCGGCGACGGCGAGATGTCCGTGTTGGATCAGAGTACACTGGACGGAAGCGGCGGCGGCCACCAGCTGTGGTGGCCGGAGAGCGTCCGTACGCCGCCGCGCGCCGCCGCCGCCTTCTCGGCCACGGCCGACGAGCGGACGCCGGCGTCCATCTCCGATGACCCCAAACCAACCACCTCAGCGAACCACGCGCCTGAAAGCGACTCGGACTCCGATTGCGATTCGCTGTTAGAAGCAGAGAGGAGTCCACGCCTGCGTGGCACGAAATCCACAGAAACAAAGCGAATAAGAAGGATGGTGTCCAACAGGGAGTCCGCTCGACGATCCAGGAGGAGAAAGCAGGCACAGTTATCTGAACTCGAATCACAGGTCGAGCAACTCAAAGGCGAAAACTCATCCCTCTTCAAGCAGCTCACAGAGTCCAGCCAGCAGTTCAATACAGCGGTCACGGACAACAGGATCCTCAAATCGGATGTAGAGGCCTTAAGAGTCAAGGTCAAGATGGCTGAAGACATGGTCGCGAGGGCCGCGATGTCGTGTGGCCTGGGCCAGCTCGGGCTGGCGCCATTGCTCAGCTCCAGGAAGATGTGCCAAGCTTTGGATATGCTCAGTTTACCACGGAACGATGCCTGTGGTTTCAAAGGCTTGAACCTGGGTCGACAGGTTCAGAACTCACCGGTTCAAAGCGCTGCAAGCCTAGAGAGCCTGGACAACCGGATATCCAGCGAGGTGACCAGCTGCTCGGCTGATGTGTGGCCTTAA
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| Protein seq | MMKKCPSELQLEAFIREEAGAGDRKPGVLSPGDGARKSGLFSPGDGEMSVLDQSTLDGSGGGHQLWWPESVRTPPRAAAAFSATADERTPASISDDPKPTTSANHAPESDSDSDCDSLLEAERSPRLRGTKSTETKRIRRMVSNRESARRSRRRKQAQLSELESQVEQLKGENSSLFKQLTESSQQFNTAVTDNRILKSDVEALRVKVKMAEDMVARAAMSCGLGQLGLAPLLSSRKMCQALDMLSLPRNDACGFKGLNLGRQVQNSPVQSAASLESLDNRISSEVTSCSADVWP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0662200 | RBH | 0.0 | 0.000000 | 2.770680 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g45140 | RBH | 0.0 | 0.000000 | 0.699083 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0175100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0025260 | RBH | 0.0 | 39.445961 | 2.806811 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0025070 | RBH | 0.000000 | 3.132651 | 0.692433 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0025240 | RBH | 0.248535 | 21.273031 | 4.252605 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0024830 | RBH | 0.045050 | 0.990334 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0025300 | RBH | 0.0 | 1.316144 | 4.162639 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0427900 | RBH | 4.117811 | 47.8840065 | 0.3699265 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0024800 | RBH | 0.069210 | 1.863851 | 1.029572 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0411100 | RBH | 24.58798 | 85.3410565 | 0.9120235 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0025210 | RBH | 0.0 | 0.672312 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0025220 | RBH | 0.130041 | 17.007204 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0024870 | RBH | 0.0 | 53.220638 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0025460 | RBH | 0.114346 | 7.244645 | 0.270882 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0025110 | RBH | 0.0 | 19.827431 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G024960 | RBH | 0.0 | 6.298362 | 0.454255 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0025070 | RBH | 0.350736 | 60.482521 | 0.512344 |
