Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os06g0111400 | OGI:06001460 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr06:634262-640450 | ||||||||
| Gene Symbol | PXLG1, OsPXLG1 | ||||||||||
| DNA seq | CCAGGAAATGATTTTATAAGCTCACACAACACAACTTACACAAGTCACAAAACACGCATGATAATGATTTTACAAGCTAACCATTTCTCGTCCTCCACTATATTTGACTGGCAAATTAGTATGAAAGTGTATTAATTAATGATCTATAAAGAACACACAATAATCATCATCTCCATCTGACAAACTAATACAGCAATACTACTATACAATACAATCAGTAACGAGATCTCTGCCTGCACAGAACGAAATCGGTTGCAAATCACCCAGGGGAAAAAATACTACTGAAAAAAGAAGAGCAACAATCTCCAGTTTCTTTCTGGGCAAAATGTGCATCATTCTTGTCTGATCAGACGTGAGGAGCTGAGCTCTGTGGTGCTGTAGAAGGACTCATCTGGGTAGTACCCACCCCCATCCTTCTCATCCTCCCATTTGAGCACCTCCCTGATGAACTTGAAGGCCTCGTCGACGGTCAGCCTGTCGCGGGCTCGCGCCTGCCACACGAACAGCTTGCGATCCGTGCAGGCGGCGTACAACTCCTTGAACTTCATCGCGACATAGTAGAACGCCTGGTGAGCCAGCGACTGATTGTTGTGGTGAGTCCGGAGAGGGCAGAAGTCGCTGAACCACTCGCAGGTGGAGAGCGGGACGCGCCCGATTTTCTCCTCGAAGAGGTCGAACTTGTTGAGCACAAGAACAAATGGCATGTCGCGGAAACATGGTTGCCTGGGACAAGTATAGGTTAGTAACTTTGGTCCTGGAATGAGATTTTACTAATTTCAGGAAAGCTGTAACATTGTTCGCATTATATATAGGCAATATGGTATTCGCAAATATGAAATGTGCAATCTTCCCAAACTATTAGATTCAATTGAAACAAGCTGTAACATTGTCCATTTTGTACACAAGCAATACGGTATTCGCAAATATGAAGTATGCAATCCTCCCAAACTATTACTAGATTCAATTGGAACAAGACCAACCTCCCTTGATCTATCACTTGTCACTTTAAATATCTTTTTTCTGATTATGCGCAATTATGGAACTGTTAAAGTTACAAAACTATCTGGCTAATGCCAATAGTACCTGATTGTAGCCTCAAACAAGTCCCTGCTTTGGATCATCTTATTCACAAGGGGACTGTTGCCACCACTTGAAGGGGCCCCCAGCTGGTCATAGTCACTGAGTGCTACCGAGAATATTACCATGCTGACATCCTCAAACATTTCCACCCACTTGCATCCCTCATTCATTCCCTTGGCACTTACTCTAATCAGCTGATATCTGAAAAGGAATAAAAGCTGATGAGACAATAGCTTTCCGGTACTTGCTTCGCAGGGCAAATAAATAATCACCCCAAGCAAAGAGCAGGTAGCCTACCTATTTCACTGACCAGTAGAAATGCATTTTACCACAATCGAAAGATACATTGCCAACAATTTAATATCTAAGGCTATTTTATTTATAGAGAGCTAGTAACAAAAAAAATGACGGATGGAAAAGGAAAATAAAAGGCACTGTTTAGGGTATATGGATATGTAGAGATGTGTACTATTAAAGGATTTATATGCACTTCAGGCATGAGTCATGAAGAAAGAGTTTACTTGTTTAGTGTCTGAGAGTGAGGCTCATGATTGTCAGTGTACATTTCTGACATAGGGCTACGGTCATCCAGAGTAAACTCAATGAAGGCTAATCCATTCCCTTGTGTTACTCCTTCAGCATATATTATATCTTTCTCTGAAGGTTCATACTCATTACTTGATACTTCAATGGCCTGCAAGGATGTCATAAAAAGACAAGTCAATGAGGGATTCAAACACCTATAGTGTACACAAAAAAAAAAAGTAAGTGCAGGGGCACATTATGTTATGCTTGGTGCCGGAGTAAGGCAAATGATTAGTGGTTCAAGCTGTTGTAGAATTTTTAGGAACAGATATGATATAGGAATCTAGAGGGATTCACTGACACTTATAAAGTTATAACCATAATAGGTACTGGTGTAGCACAATGCACAAAGGCAGGTTGTGAATAATAATGCAAGTTTTCAATGATAAATTCACTCTTTGTTTAATATATAAGCTGAGTTAAATACCCTGCTCAAGAAATATTCGGCAACATCAGGGAGAAAATGCAATTCGTCTTTTCTTTTATATGTTGCTTGTATGGCAGGATCCTTCCACATTTCCTCAACAATTGGAGCATATTCACGCGTAGCTGCAGGGAAGAATGCATCGAGGTCTCCCATTGCTATTATATCCAAAAGCCAATCCGAGAACTTCTTCAGCTTTGCATTTATCGAGTATATGCAAGAATCTGAACCATTCGATTTATTTCCATCTGCATCAATAAGAAAAACTTAAAGATATTGCATATAGCCCTGAAAAATAGAAGTGAAGAATATGTGTTAGCTGTGGTTCTACCATGCTGCGTATTCTCATCCTCTGAGCTTGGGTTATTCGATCCAGCCAAAGCCTCTTCCTCAAAACGCTCACGGCCCTCAAGAAGGATCCCAAGGTACTTGAACATATTACTTTGGATCATAAGTTTGATACTATCAAGTTCTTCTTGGGTAAACCTAGTGTCGTATAATAACTTTGCCTGTTTTGAGAAAAAAAAACATCATGCAAATGTATACAAGATAAATAATAGGGCTGACTCCTCAATTGTCCACTGGAAACTGTGCATCCACATATCAGAATGAATAACTTGTGTGGTGCTCCATAAAAATTTGCAGGCATTTATTGGAAAAGAAACACACCAGAGATAACTAAACTACACATGAAAATTGATCAGTGATAGTTTGCAGAATGTCATGTCACGTTGCATATGTGATTGTCACCTATAACAGTTAACCTGCAGTCCTGTGCTTCCGAACGGCGAGAAGGTTTCTATGTCACTAAACGGAGACTATAAATCAAATTCAAGCTGTATATCATACAGGGCCAGTAGGTAAAGGTAGAGTCCACCCTAAGAGATGTATAACAAAGTAAAAGTTTACTGCAGTTTTAAATGTCAAATTTGGTCGTACCTGCTTGAATATGGTGCTTGTACCAGCTCCAGGCGATCCAAGAATAAGAAGCTTTTGGATTCTTTTCTGATCTAAGTAATCAGGAACAGTTCTTGCTGAATAAGGAGCTTCGTCCTTTGGTTCGTCAGAGTTTGCTGGAGGAACCGGTAGTGAAAACAAGGCACATGCAAAACGTGTCACAGGCTGCAAATAAGGACATGCAAAATCATGTTAAGAAAACAACAAGACATGCAGTAGTTTTAGGAAGTACAATGAATGGGTTAGAACTCCTTTTTCTTTACGTGAAACAGTAGGAGAGGCTCCTACTGCATTAAATATTAAAAATAAGATAAATTACAAAGAGGGAAGGGAGAATGCACTGGATTATGTACGGGGAGAGGGGCAGCAGAGGAAAAGAAGGAAAATAGAACACGATTATAAAAGTGAGCTAATCCATGATTGCCAAAGTGGTTAGAACTCCTTTGAGCAAGATACATACCGATTCCCATATCTTCCCTTTGATATTGTTTTGGCCTTCTTCCTCATAGCCACCATCATGGTAAACCCAAAAGTGAGTGTCACGGGGGCACTGAACTTGTGCAATCTACAAGAATGATTCAGATATTGAGGCAAATTCAGTGATAGTGATAGCACAATTATAGTACCAGCAAAAAAAATCGCCTTATTCGTTTCCTAAAAACCACGCACATAGTCCTTACACTCTTTCTTAATCTGGTGAAATTATAGTCAGACTACATGCTACATTCATCTTCATGTGTTTTGCTATTAATAGAATACAACATTGGGTATACCACTCAAGTCTTTCCTCTTAAGATAGATAACACCAAAATTGCTGGGTTCACTTTAAGACCATCCAAACTTCACAAATCTCATCAACTACTATTCCCGTTACCTCACGTCCAATCTCCTAAGAGAGACTCAACTAGATGGCTGATCTGGCTTGGTTTGACTTCTTCCAAACCAGGACAGTAGACAGAACCGCAGAAGGAAAGTGAGGCACTAGACAGAGGCCAATCCTTCTTACCCAAAGCCAAGCCACACCAGATCAGCCATCTAGTTCAATAGCTATTAGTTGGTCCAACAGGTGGTAATGATAGTGGTCAATTTACAAGAGTTATGAAGTTTGGACGGTATTAAAGTAAACTTTATTTTTTGTGGTATGTGGTATATTTCTAAAGAAGAAAATTTGGATGGTATACAGTATACACCTAGTTTCTCCCGTAATATTGTCTTCTTGGTTTGAACAATCATATGAAATTCTATGAAAGGCTGTATGCCTATAAGAAAGTGTGTCTATGATATAACTTAGACATAGTCTTAAAAAAATGTGTCATATATATTAATATTGTTTCATAATGGATATTTCTGCAATTGTACCCGCTTTCAAAGATAGATGTACAATGATAGAACACTGATACCTTCAGAACTCTCAGTTCAATCTTGGTAATTTCCCTTCCATTCATATAAACCTGAGTGTTGCCATTACTGGCATTGGGCTGAAGCTTTCCATTAAAGGTTAGGTTAGTGCTGACAACCCTGTCTGGCTTTTCTCCTTCCTATCAGCAGGAACAAAATGTCATTAGCAAAAGCTCAGACTGCATAAGAAGGTATGCTCTTCTCCTACCAACACTAACAGGCTTACCTTTCCCCACAAGCCTGACTCCTTGTCGTACCAATATCTTCCAGGCTTGAGCTTTTGAGGAGGCCGTTGGCAACTAAGCAAGCTGGCCATCTCATCTGGATTAAGAGGAAAACCATTTATGATGAGTTGCTCAGGCCGGAGCTGGTTTGCTTGGCATTCCTTCTCAGCTTTCAGTATTTGCCTTACTTCCAACGGGCTGAGCAGACGTGATAGTATCCTCGAACCCTTCCCGAGCTTCGACCGCTTGCTCTCATCGATTGGCTGGCCAATGCAAGTGATGCACTTGCGCCCTTCTGGCATCGAGCCCATGGCCCTGAGCACGCAGTAGCTGCAAAACCTCGCGTCGCAAACAATGCATGATTCCTTGCTCTCCCACTTCCTTTTACCGCAACGGCTGCAGGTCCTCCCTCTCTTCTCCTTCTTGGTCACCGCCACGTACTGTTCCGACACATCATCAAACTCTTTGCTCTCATACCTGCTGTCCTCAGTGACCCCAAATGTGACAACCTGAGCTCTTCTTCCCTCCTGAGCAGCTGTCCTACCACCTCTCTGCCCATGGAAATTGTGCGCGGATTCTTGCGACACCGAGCATGAGTCATCATCATCAGAGAACCCCTCATTCTGCGGCGCCGAATCGACCGATTCCGAGCTTCTCCTCCTCCTACCCTGTGCCGCAACCGGCGGTGGCTCGGCACGGTGAGCATCCTGCTTCCGGTGCACCGGCGGCATAAACACCGGCCTGACGACCGGAGCCACCACGCCGTTGCTCCTCCCGGGCACCAGCGGGCCGGAGACGGGCTGCGCGGTGGGAATCGCCGGCAGGTCGACGGGATCGATCCTGGGGAGCTCGTAGGACACCGGAGGGCCGTCGTACTCGAGCGCAATCGAATAGTCGAGGTTGGCCGGCGCCTCCGGGATGGTGGTCCCCGGTGGGAGCATCCTCCTCACCATCTCCTCCCAGTTGCTCCCCCCCACGGCTCCCGCTCCGGCCATCTCCCCCTCCAAAAACCTAGGTAACCTAACCTCCTCCTCCTCACCTCCCAAATCGAGTAAACATGGAGTAGTACAATCAAAACTCACTCCGACCTAATTAAGACTTGAAAACCCAAAATCTTTTCACCGCGGATTGAGGAATCCCTCCTCCACCGTCGTCAACGACGGCCAAAGCCGGGTCAAAGCCCAATCTTTGAGCCACCACCAACAACCAAGAAGAGCGAGGATACTGAACCAAACACCAACGACTCCACGTCTCCACTCCACCCCGGGTCAGTCAAACGAGAGAAACCCCCAAAAGGCTAACCTTTGAACGAGTTTGATGCTGCACAAGGGAGGGAGAAAGGGATGTCGCCAGTTTGGACCGAATGGTAAAGTTGCGATTTTTCTCCTTTTTTCGTCTTGTGTGTTTTTTTGGGAGGAAATGGAAATGGAAATGGAAATGGGAGAGATTGGGTGGAGACGACGACGACGAGGGTTGAGACTCGAGAGTTCAGACTCGAGGAGACGACCGTTTCAGACTTTC
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| CDS seq | ATGGCCGGAGCGGGAGCCGTGGGGGGGAGCAACTGGGAGGAGATGGTGAGGAGGATGCTCCCACCGGGGACCACCATCCCGGAGGCGCCGGCCAACCTCGACTATTCGATTGCGCTCGAGTACGACGGCCCTCCGGTGTCCTACGAGCTCCCCAGGATCGATCCCGTCGACCTGCCGGCGATTCCCACCGCGCAGCCCGTCTCCGGCCCGCTGGTGCCCGGGAGGAGCAACGGCGTGGTGGCTCCGGTCGTCAGGCCGGTGTTTATGCCGCCGGTGCACCGGAAGCAGGATGCTCACCGTGCCGAGCCACCGCCGGTTGCGGCACAGGGTAGGAGGAGGAGAAGCTCGGAATCGGTCGATTCGGCGCCGCAGAATGAGGGGTTCTCTGATGATGATGACTCATGCTCGGTGTCGCAAGAATCCGCGCACAATTTCCATGGGCAGAGAGGTGGTAGGACAGCTGCTCAGGAGGGAAGAAGAGCTCAGGTTGTCACATTTGGGGTCACTGAGGACAGCAGGTATGAGAGCAAAGAGTTTGATGATGTGTCGGAACAGTACGTGGCGGTGACCAAGAAGGAGAAGAGAGGGAGGACCTGCAGCCGTTGCGGTAAAAGGAAGTGGGAGAGCAAGGAATCATGCATTGTTTGCGACGCGAGGTTTTGCAGCTACTGCGTGCTCAGGGCCATGGGCTCGATGCCAGAAGGGCGCAAGTGCATCACTTGCATTGGCCAGCCAATCGATGAGAGCAAGCGGTCGAAGCTCGGGAAGGGTTCGAGGATACTATCACGTCTGCTCAGCCCGTTGGAAGTAAGGCAAATACTGAAAGCTGAGAAGGAATGCCAAGCAAACCAGCTCCGGCCTGAGCAACTCATCATAAATGGTTTTCCTCTTAATCCAGATGAGATGGCCAGCTTGCTTAGTTGCCAACGGCCTCCTCAAAAGCTCAAGCCTGGAAGATATTGGTACGACAAGGAGTCAGGCTTGTGGGGAAAGGAAGGAGAAAAGCCAGACAGGGTTGTCAGCACTAACCTAACCTTTAATGGAAAGCTTCAGCCCAATGCCAGTAATGGCAACACTCAGGTTTATATGAATGGAAGGGAAATTACCAAGATTGAACTGAGAGTTCTGAAGATTGCACAAGTTCAGTGCCCCCGTGACACTCACTTTTGGGTTTACCATGATGGTGGCTATGAGGAAGAAGGCCAAAACAATATCAAAGGGAAGATATGGGAATCGCCTGTGACACGTTTTGCATGTGCCTTGTTTTCACTACCGGTTCCTCCAGCAAACTCTGACGAACCAAAGGACGAAGCTCCTTATTCAGCAAGAACTGTTCCTGATTACTTAGATCAGAAAAGAATCCAAAAGCTTCTTATTCTTGGATCGCCTGGAGCTGGTACAAGCACCATATTCAAGCAGGCAAAGTTATTATACGACACTAGGTTTACCCAAGAAGAACTTGATAGTATCAAACTTATGATCCAAAGTAATATGTTCAAGTACCTTGGGATCCTTCTTGAGGGCCGTGAGCGTTTTGAGGAAGAGGCTTTGGCTGGATCGAATAACCCAAGCTCAGAGGATGAGAATACGCAGCATGATGGAAATAAATCGAATGGTTCAGATTCTTGCATATACTCGATAAATGCAAAGCTGAAGAAGTTCTCGGATTGGCTTTTGGATATAATAGCAATGGGAGACCTCGATGCATTCTTCCCTGCAGCTACGCGTGAATATGCTCCAATTGTTGAGGAAATGTGGAAGGATCCTGCCATACAAGCAACATATAAAAGAAAAGACGAATTGCATTTTCTCCCTGATGTTGCCGAATATTTCTTGAGCAGGGCCATTGAAGTATCAAGTAATGAGTATGAACCTTCAGAGAAAGATATAATATATGCTGAAGGAGTAACACAAGGGAATGGATTAGCCTTCATTGAGTTTACTCTGGATGACCGTAGCCCTATGTCAGAAATGTACACTGACAATCATGAGCCTCACTCTCAGACACTAAACAAATATCAGCTGATTAGAGTAAGTGCCAAGGGAATGAATGAGGGATGCAAGTGGGTGGAAATGTTTGAGGATGTCAGCATGGTAATATTCTCGGTAGCACTCAGTGACTATGACCAGCTGGGGGCCCCTTCAAGTGGTGGCAACAGTCCCCTTGTGAATAAGATGATCCAAAGCAGGGACTTGTTTGAGGCTACAATCAGGCAACCATGTTTCCGCGACATGCCATTTGTTCTTGTGCTCAACAAGTTCGACCTCTTCGAGGAGAAAATCGGGCGCGTCCCGCTCTCCACCTGCGAGTGGTTCAGCGACTTCTGCCCTCTCCGGACTCACCACAACAATCAGTCGCTGGCTCACCAGGCGTTCTACTATGTCGCGATGAAGTTCAAGGAGTTGTACGCCGCCTGCACGGATCGCAAGCTGTTCGTGTGGCAGGCGCGAGCCCGCGACAGGCTGACCGTCGACGAGGCCTTCAAGTTCATCAGGGAGGTGCTCAAATGGGAGGATGAGAAGGATGGGGGTGGGTACTACCCAGATGAGTCCTTCTACAGCACCACAGAGCTCAGCTCCTCACGTCTGATCAGACAAGAATGA
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| Protein seq | MAGAGAVGGSNWEEMVRRMLPPGTTIPEAPANLDYSIALEYDGPPVSYELPRIDPVDLPAIPTAQPVSGPLVPGRSNGVVAPVVRPVFMPPVHRKQDAHRAEPPPVAAQGRRRRSSESVDSAPQNEGFSDDDDSCSVSQESAHNFHGQRGGRTAAQEGRRAQVVTFGVTEDSRYESKEFDDVSEQYVAVTKKEKRGRTCSRCGKRKWESKESCIVCDARFCSYCVLRAMGSMPEGRKCITCIGQPIDESKRSKLGKGSRILSRLLSPLEVRQILKAEKECQANQLRPEQLIINGFPLNPDEMASLLSCQRPPQKLKPGRYWYDKESGLWGKEGEKPDRVVSTNLTFNGKLQPNASNGNTQVYMNGREITKIELRVLKIAQVQCPRDTHFWVYHDGGYEEEGQNNIKGKIWESPVTRFACALFSLPVPPANSDEPKDEAPYSARTVPDYLDQKRIQKLLILGSPGAGTSTIFKQAKLLYDTRFTQEELDSIKLMIQSNMFKYLGILLEGRERFEEEALAGSNNPSSEDENTQHDGNKSNGSDSCIYSINAKLKKFSDWLLDIIAMGDLDAFFPAATREYAPIVEEMWKDPAIQATYKRKDELHFLPDVAEYFLSRAIEVSSNEYEPSEKDIIYAEGVTQGNGLAFIEFTLDDRSPMSEMYTDNHEPHSQTLNKYQLIRVSAKGMNEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSSGGNSPLVNKMIQSRDLFEATIRQPCFRDMPFVLVLNKFDLFEEKIGRVPLSTCEWFSDFCPLRTHHNNQSLAHQAFYYVAMKFKELYAACTDRKLFVWQARARDRLTVDEAFKFIREVLKWEDEKDGGGYYPDESFYSTTELSSSRLIRQE |
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| Function | Extra-large guanine nucleotide-binding protein 3 [UniProtKB/Swiss-Prot:Q9C516] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os06g0111400 | Os06t0111400-01 | Chr06 | 634367 | 640450 | - | irgsp1_rep | ||
| CDS seq | ATGGCCGGAGCGGGAGCCGTGGGGGGGAGCAACTGGGAGGAGATGGTGAGGAGGATGCTCCCACCGGGGACCACCATCCCGGAGGCGCCGGCCAACCTCGACTATTCGATTGCGCTCGAGTACGACGGCCCTCCGGTGTCCTACGAGCTCCCCAGGATCGATCCCGTCGACCTGCCGGCGATTCCCACCGCGCAGCCCGTCTCCGGCCCGCTGGTGCCCGGGAGGAGCAACGGCGTGGTGGCTCCGGTCGTCAGGCCGGTGTTTATGCCGCCGGTGCACCGGAAGCAGGATGCTCACCGTGCCGAGCCACCGCCGGTTGCGGCACAGGGTAGGAGGAGGAGAAGCTCGGAATCGGTCGATTCGGCGCCGCAGAATGAGGGGTTCTCTGATGATGATGACTCATGCTCGGTGTCGCAAGAATCCGCGCACAATTTCCATGGGCAGAGAGGTGGTAGGACAGCTGCTCAGGAGGGAAGAAGAGCTCAGGTTGTCACATTTGGGGTCACTGAGGACAGCAGGTATGAGAGCAAAGAGTTTGATGATGTGTCGGAACAGTACGTGGCGGTGACCAAGAAGGAGAAGAGAGGGAGGACCTGCAGCCGTTGCGGTAAAAGGAAGTGGGAGAGCAAGGAATCATGCATTGTTTGCGACGCGAGGTTTTGCAGCTACTGCGTGCTCAGGGCCATGGGCTCGATGCCAGAAGGGCGCAAGTGCATCACTTGCATTGGCCAGCCAATCGATGAGAGCAAGCGGTCGAAGCTCGGGAAGGGTTCGAGGATACTATCACGTCTGCTCAGCCCGTTGGAAGTAAGGCAAATACTGAAAGCTGAGAAGGAATGCCAAGCAAACCAGCTCCGGCCTGAGCAACTCATCATAAATGGTTTTCCTCTTAATCCAGATGAGATGGCCAGCTTGCTTAGTTGCCAACGGCCTCCTCAAAAGCTCAAGCCTGGAAGATATTGGTACGACAAGGAGTCAGGCTTGTGGGGAAAGGAAGGAGAAAAGCCAGACAGGGTTGTCAGCACTAACCTAACCTTTAATGGAAAGCTTCAGCCCAATGCCAGTAATGGCAACACTCAGGTTTATATGAATGGAAGGGAAATTACCAAGATTGAACTGAGAGTTCTGAAGATTGCACAAGTTCAGTGCCCCCGTGACACTCACTTTTGGGTTTACCATGATGGTGGCTATGAGGAAGAAGGCCAAAACAATATCAAAGGGAAGATATGGGAATCGCCTGTGACACGTTTTGCATGTGCCTTGTTTTCACTACCGGTTCCTCCAGCAAACTCTGACGAACCAAAGGACGAAGCTCCTTATTCAGCAAGAACTGTTCCTGATTACTTAGATCAGAAAAGAATCCAAAAGCTTCTTATTCTTGGATCGCCTGGAGCTGGTACAAGCACCATATTCAAGCAGGCAAAGTTATTATACGACACTAGGTTTACCCAAGAAGAACTTGATAGTATCAAACTTATGATCCAAAGTAATATGTTCAAGTACCTTGGGATCCTTCTTGAGGGCCGTGAGCGTTTTGAGGAAGAGGCTTTGGCTGGATCGAATAACCCAAGCTCAGAGGATGAGAATACGCAGCATGATGGAAATAAATCGAATGGTTCAGATTCTTGCATATACTCGATAAATGCAAAGCTGAAGAAGTTCTCGGATTGGCTTTTGGATATAATAGCAATGGGAGACCTCGATGCATTCTTCCCTGCAGCTACGCGTGAATATGCTCCAATTGTTGAGGAAATGTGGAAGGATCCTGCCATACAAGCAACATATAAAAGAAAAGACGAATTGCATTTTCTCCCTGATGTTGCCGAATATTTCTTGAGCAGGGCCATTGAAGTATCAAGTAATGAGTATGAACCTTCAGAGAAAGATATAATATATGCTGAAGGAGTAACACAAGGGAATGGATTAGCCTTCATTGAGTTTACTCTGGATGACCGTAGCCCTATGTCAGAAATGTACACTGACAATCATGAGCCTCACTCTCAGACACTAAACAAATATCAGCTGATTAGAGTAAGTGCCAAGGGAATGAATGAGGGATGCAAGTGGGTGGAAATGTTTGAGGATGTCAGCATGGTAATATTCTCGGTAGCACTCAGTGACTATGACCAGCTGGGGGCCCCTTCAAGTGGTGGCAACAGTCCCCTTGTGAATAAGATGATCCAAAGCAGGGACTTGTTTGAGGCTACAATCAGGCAACCATGTTTCCGCGACATGCCATTTGTTCTTGTGCTCAACAAGTTCGACCTCTTCGAGGAGAAAATCGGGCGCGTCCCGCTCTCCACCTGCGAGTGGTTCAGCGACTTCTGCCCTCTCCGGACTCACCACAACAATCAGTCGCTGGCTCACCAGGCGTTCTACTATGTCGCGATGAAGTTCAAGGAGTTGTACGCCGCCTGCACGGATCGCAAGCTGTTCGTGTGGCAGGCGCGAGCCCGCGACAGGCTGACCGTCGACGAGGCCTTCAAGTTCATCAGGGAGGTGCTCAAATGGGAGGATGAGAAGGATGGGGGTGGGTACTACCCAGATGAGTCCTTCTACAGCACCACAGAGCTCAGCTCCTCACGTCTGATCAGACAAGAATGA
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| Protein seq | MAGAGAVGGSNWEEMVRRMLPPGTTIPEAPANLDYSIALEYDGPPVSYELPRIDPVDLPAIPTAQPVSGPLVPGRSNGVVAPVVRPVFMPPVHRKQDAHRAEPPPVAAQGRRRRSSESVDSAPQNEGFSDDDDSCSVSQESAHNFHGQRGGRTAAQEGRRAQVVTFGVTEDSRYESKEFDDVSEQYVAVTKKEKRGRTCSRCGKRKWESKESCIVCDARFCSYCVLRAMGSMPEGRKCITCIGQPIDESKRSKLGKGSRILSRLLSPLEVRQILKAEKECQANQLRPEQLIINGFPLNPDEMASLLSCQRPPQKLKPGRYWYDKESGLWGKEGEKPDRVVSTNLTFNGKLQPNASNGNTQVYMNGREITKIELRVLKIAQVQCPRDTHFWVYHDGGYEEEGQNNIKGKIWESPVTRFACALFSLPVPPANSDEPKDEAPYSARTVPDYLDQKRIQKLLILGSPGAGTSTIFKQAKLLYDTRFTQEELDSIKLMIQSNMFKYLGILLEGRERFEEEALAGSNNPSSEDENTQHDGNKSNGSDSCIYSINAKLKKFSDWLLDIIAMGDLDAFFPAATREYAPIVEEMWKDPAIQATYKRKDELHFLPDVAEYFLSRAIEVSSNEYEPSEKDIIYAEGVTQGNGLAFIEFTLDDRSPMSEMYTDNHEPHSQTLNKYQLIRVSAKGMNEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSSGGNSPLVNKMIQSRDLFEATIRQPCFRDMPFVLVLNKFDLFEEKIGRVPLSTCEWFSDFCPLRTHHNNQSLAHQAFYYVAMKFKELYAACTDRKLFVWQARARDRLTVDEAFKFIREVLKWEDEKDGGGYYPDESFYSTTELSSSRLIRQE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os06g0111400 | Os06t0111400-02 | Chr06 | 634262 | 639360 | - | irgsp1_rep | ||
| CDS seq | GTGACCAAGAAGGAGAAGAGAGGGAGGACCTGCAGCCGTTGCGGTAAAAGGAAGTGGGAGAGCAAGGAATCATGCATTGTTTGCGACGCGAGGTTTTGCAGCTACTGCGTGCTCAGGGCCATGGGCTCGATGCCAGAAGGGCGCAAGTGCATCACTTGCATTGGCCAGCCAATCGATGAGAGCAAGCGGTCGAAGCTCGGGAAGGGTTCGAGGATACTATCACGTCTGCTCAGCCCGTTGGAAGTAAGGCAAATACTGAAAGCTGAGAAGGAATGCCAAGCAAACCAGCTCCGGCCTGAGCAACTCATCATAAATGGTTTTCCTCTTAATCCAGATGAGATGGCCAGCTTGCTTAGTTGCCAACGGCCTCCTCAAAAGCTCAAGCCTGGAAGATATTGGTACGACAAGGAGTCAGGCTTGTGGGGAAAGGAAGGAGAAAAGCCAGACAGGGTTGTCAGCACTAACCTAACCTTTAATGGAAAGCTTCAGCCCAATGCCAGTAATGGCAACACTCAGGTTTATATGAATGGAAGGGAAATTACCAAGATTGAACTGAGAGTTCTGAAGATTGCACAAGTTCAGTGCCCCCGTGACACTCACTTTTGGGTTTACCATGATGGTGGCTATGAGGAAGAAGGCCAAAACAATATCAAAGGGAAGATATGGGAATCGCCTGTGACACGTTTTGCATGTGCCTTGTTTTCACTACCGGTTCCTCCAGCAAACTCTGACGAACCAAAGGACGAAGCTCCTTATTCAGCAAGAACTGTTCCTGATTACTTAGATCAGAAAAGAATCCAAAAGCTTCTTATTCTTGGATCGCCTGGAGCTGGTACAAGCACCATATTCAAGCAGGCAAAGTTATTATACGACACTAGGTTTACCCAAGAAGAACTTGATAGTATCAAACTTATGATCCAAAGTAATATGTTCAAGTACCTTGGGATCCTTCTTGAGGGCCGTGAGCGTTTTGAGGAAGAGGCTTTGGCTGGATCGAATAACCCAAGCTCAGAGGATGAGAATACGCAGCATGATGGAAATAAATCGAATGGTTCAGATTCTTGCATATACTCGATAAATGCAAAGCTGAAGAAGTTCTCGGATTGGCTTTTGGATATAATAGCAATGGGAGACCTCGATGCATTCTTCCCTGCAGCTACGCGTGAATATGCTCCAATTGTTGAGGAAATGTGGAAGGATCCTGCCATACAAGCAACATATAAAAGAAAAGACGAATTGCATTTTCTCCCTGATGTTGCCGAATATTTCTTGAGCAGGGCCATTGAAGTATCAAGTAATGAGTATGAACCTTCAGAGAAAGATATAATATATGCTGAAGGAGTAACACAAGGGAATGGATTAGCCTTCATTGAGTTTACTCTGGATGACCGTAGCCCTATGTCAGAAATGTACACTGACAATCATGAGCCTCACTCTCAGACACTAAACAAATATCAGCTGATTAGAGTAAGTGCCAAGGGAATGAATGAGGGATGCAAGTGGGTGGAAATGTTTGAGGATGTCAGCATGGTAATATTCTCGGTAGCACTCAGTGACTATGACCAGCTGGGGGCCCCTTCAAGTGGTGGCAACAGTCCCCTTGTGAATAAGATGATCCAAAGCAGGGACTTGTTTGAGGCTACAATCAGGCAACCATGTTTCCGCGACATGCCATTTGTTCTTGTGCTCAACAAGTTCGACCTCTTCGAGGAGAAAATCGGGCGCGTCCCGCTCTCCACCTGCGAGTGGTTCAGCGACTTCTGCCCTCTCCGGACTCACCACAACAATCAGTCGCTGGCTCACCAGGCGTTCTACTATGTCGCGATGAAGTTCAAGGAGTTGTACGCCGCCTGCACGGATCGCAAGCTGTTCGTGTGGCAGGCGCGAGCCCGCGACAGGCTGACCGTCGACGAGGCCTTCAAGTTCATCAGGGAGGTGCTCAAATGGGAGGATGAGAAGGATGGGGGTGGGTACTACCCAGATGAGTCCTTCTACAGCACCACAGAGCTCAGCTCCTCACGTCTGATCAGACAAGAATGA
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| Protein seq | VTKKEKRGRTCSRCGKRKWESKESCIVCDARFCSYCVLRAMGSMPEGRKCITCIGQPIDESKRSKLGKGSRILSRLLSPLEVRQILKAEKECQANQLRPEQLIINGFPLNPDEMASLLSCQRPPQKLKPGRYWYDKESGLWGKEGEKPDRVVSTNLTFNGKLQPNASNGNTQVYMNGREITKIELRVLKIAQVQCPRDTHFWVYHDGGYEEEGQNNIKGKIWESPVTRFACALFSLPVPPANSDEPKDEAPYSARTVPDYLDQKRIQKLLILGSPGAGTSTIFKQAKLLYDTRFTQEELDSIKLMIQSNMFKYLGILLEGRERFEEEALAGSNNPSSEDENTQHDGNKSNGSDSCIYSINAKLKKFSDWLLDIIAMGDLDAFFPAATREYAPIVEEMWKDPAIQATYKRKDELHFLPDVAEYFLSRAIEVSSNEYEPSEKDIIYAEGVTQGNGLAFIEFTLDDRSPMSEMYTDNHEPHSQTLNKYQLIRVSAKGMNEGCKWVEMFEDVSMVIFSVALSDYDQLGAPSSGGNSPLVNKMIQSRDLFEATIRQPCFRDMPFVLVLNKFDLFEEKIGRVPLSTCEWFSDFCPLRTHHNNQSLAHQAFYYVAMKFKELYAACTDRKLFVWQARARDRLTVDEAFKFIREVLKWEDEKDGGGYYPDESFYSTTELSSSRLIRQE
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0111400 | RBH | 4.805995 | 4.443540 | 3.726785 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g02130 | RBH | 3.023550 | 2.607382 | 0.701281 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0000790 | RBH | 1.649757 | 22.352449 | 6.624013 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0000800 | RBH | 0.331584 | 5.687310 | 2.466086 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0000770 | RBH | 3.056175 | 10.246732 | 9.731375 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0000770 | RBH | 0.608017 | 0.196584 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0000750 | RBH | 12.390927 | 20.092102 | 18.930067 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0008800 | RBH | 6.3565215 | 15.746397 | 4.903684 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0000720 | RBH | 1.046733 | 1.090081 | 1.119502 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0009800 | RBH | 10.356374 | 25.805561 | 20.3043165 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0000750 | RBH | 0.541796 | 0.481471 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0000750 | RBH | 0.937653 | 15.346973 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0000770 | RBH | 14.475553 | 21.124439 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0000750 | RBH | 1.953992 | 1.678818 | 1.175474 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0000710 | RBH | 1.116198 | 7.714026 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G000740 | RBH | 1.336404 | 3.813622 | 4.015728 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0000740 | RBH | 4.141378 | 45.165428 | 6.236800 |
