Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os05g0490700 | OGI:05065320 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr05:24115647-24121667 | ||||||||
| Gene Symbol | OsSET22, SDG728, OsSUVH8 | ||||||||||
| DNA seq | AGAGCGAAAATGCAAGGTGATCCTAAACCGGCACATTGTACATGACTGCATCTGACAGGTCACAACTAATTGCTAGAGTTCCAGTTAAAACTGACGCTAGCCTACAAAGGATGGGTGCAGATGGATTACAGACGATTTGCAGCAATAATATCAAATACATGCCCCCACAAAATATGGAACAAAAGGTGGTGTACAGAGGCCACCAAGTTACCAAGTGCGGCATCAACACAACAGAGTTTAACCATAATTTAACTGTCTATGCAGTTCAAATCGACGGTAATTTACTGTCTCTTCACAGTTCATGTTGAAACCCATCGTCATTCTCAGGGAATAATACCAGAGCTCGAATCTGGGGGTACAGGCAGGAAGTTCTGCAGATGTAACAACACAAATAATATATCAAGCTGATATCTGAAAAACACAAATAGAAGAGACAAAAGTATGTGATGCTCCGAGGTAGATTCAAATAGCATATGTGCACTACTTTGTATGCAGAAAGTGAAGCCTTTCTGGCATTGTTATCCACTGCATTATTGCGCTAGGAGACGAACATATTTGCCCCTTCTTTCCGCTGCGTCTGAGAGGTGCACAAAGAGAAGAAAAGAGACTCGTTTTTCGCACGCACGCTTCCTGAATTGCTAAATGATGCATTTTTTACAAAAACTTTTTATAGAAAAGTTACTTTAAAGATCATATTAATCATTTTTTCAAGTTTAAAATAATTACTTCCTCCGTTTCACAATGTAAGTCATTCTAGCATTTCCTACATTCATATTGATGTTAATGAATCTAGACATGTATATCTATATAAATTCATTAACATCTATATGAATGTAGGAAATGCTAGAATGACTTACATTGTGAAACGGAGGGAGTAATACTTATTAATTAATTATGTACTAAAAGCTCATCTCGTTTTGCGTATCTTCTCAATCTTCTCTTTCCCTCTTCTCTCAAACACAGAAGTACTGCACTTAACCTTGTCATCCCACAACATTTGCGGTCCAGAAGTGCATTACAAAAGGAGTGTATATTGTAGGAGACGTAGATGCACAATTATATGATATAAAACAATAAAGTGTAGTGCATCACATAAGTAGTAAGTATTCACCATTTCACCTAAGTAAACAGTGCAGTTTGGCAATATAAAGAGAACCAATTTTGTCAAAGGAATTTACCTGGCAAATAGGTTTGTGTGTTGATCCAACACAATGAAGATACATCCATCAATTAAAATACTCCCCGGCAGTTTGATGATCCACAAAAGCAGTTCTTAGTTCTACGAGAACCTGAAGACTCAGATCCAGCAACACCATAGTCAAAAGTCAGTTCTGTCATGGGAGGAATGTGCTTCAGTGCAAAGAACATGATATGTGGGTGGCTGTCATCTCCATGGTCATGCTGAACTGGCTGCCAGAAAACATTCGGGGAACAACTATGGTTCATGAAACGTGAGACATTTCCCATCTTTTTTGCACTAATCTTGATGGGCAGTGGCTCAAATTCATCAGCTGATACATATGTACTCTCCTCACCAATCAATTCAGGACCAAAGTTGAATTTTAATGTCTTCTCACCAGGACATACAGTCTGAAAAATGTAATCATCTTCACTGTCATCCAGATTAACTTTGAGCTCATCAATGACCTCACCAGTATACTCACAGATAAATGCACCAGCACGAATGGGATCCCAGCAGCGAAGACCCCAGCCTCGATTTGCAGTCCGGAAGACCTCAAAGTGAAATCTGACCCCTTTTTGGGTCACTCTGTTCCGGCAATTCGTAGTACAATGGCAAGCATCACCGCATTCATAAATTATTGGCTTGCGGCACGCCAAAAGTCCTGATGAGCTGTAAGGTAAGTCACCTCCGTTATGTTGTCCACAAGCACAGTTGGGATCACCAGGCAGGCAAACACTCTGGCATCCGCAACCCTGTAAGGGTTTCATAGAACTGAGGGGCCTCAAGTATTTGACTTGACTGGCATAGGTGAAATGCCCAGGTCCTTTCTCATGGTCTACCTCATTGACAAGGCAAACTGGGAGAGCTTCAGCCGCAGATGATAGATCAGGTAATATAACCCTGCCTCTGCTTGCTGGATTGTCTATCCATCCTTGAGTCATCTTCCACAATGCAGCTCCATCAGGCTGTCCAGGCTCACGCAGCAGTTTGTACTTGAAGCAATTGATACCAGACTTTGTTCTCTCCTTCCAGGACTCCTGAATCTTATAGAGGCCATCATATATGTAGATTTTTCCAGTCAGGCAAAATGGATCCCTGAAGCCCCGCACAACCCTGATCTCGTTCTTCCTATGCAGGCTCCTCTCCAGAGCAAGGTTACCTCTCTCAAGCTTTTGATCATGCCTCTCCTCACTGTTCCTACTATTGCCACCTGAACCACTGTACACCAGTGTATCTGTGTCATCATCCACATTCTCATAGCCACCTGCTGCAACAATACATATTGCCACAGAATCCTCATCGCTTCCAAATTTAGCACTCATATAATCAATGCCACCCATACTAGGAGCATGCAACCCGATGATACATAGCTCCATCCGGAAATAGAAAATATCCCCTATTTCAACTCCAGGAACAAGTCCTACCCTTTTTCCCACATTAGCCCTGATATTGCTTGCCATCATGATGGCGCCAGCCTTCAGGTCAGCCCGTTTGCTAGTCTCTTGTATTTCATCCAGTTGCAGATGTCTACGCCTAAGTGCTTCAAAGGTCATGTGGACTGCTTCCACAACCTCCCTGGGATCACTGGATGAAGGTGGTAAAAAGGCAAGCTCCTTGCCAGCAACAAAATTCTTGTAAACTGGCTTAGGGCGCTTGAACTTAACTCCATTTGAACCATCAGCAGCTGAACCAGATGATCTCTTGGACTTCCGTCCAGATGCTGAACCTGAGTAAGGTTCATCGCCATCAAGTGATACAATGCCTGGTCTGGTCTTATATGCCGAGATAGGAGTGGCATCAATAGCTCCATTATTGGTGTAGCTTGTATAAGAAACCCCATTTGCTGTGGTAGTGAAGGCAGTAGTTGAACCAAAGGTAGGAAGGATTCCAGAACCAAAACCGACAGGAAATTGGCCAACCGGAGTGACACATACCAAAGGCGGGGTGCTTGACTGGTTGACATTGATTCCCAAGGGTGCAGGGAACATAGGAGCTAACGATCTAATTGGTTTGGCATCCACGAGTTCTTGATAAGGACCAGGTATGAAATTCGACGCCCTATCCATCTCAAATGTATCAAAAATCCTGCACAAGAAAGAAGAATCTTAGTGTGTACTTGATAGAAGAAAACTTGGAGAAAGCAAGGCTTGGTAAAACATTAAGCACAGAGAGGGATCTAATATGAAACTGTTTTTTTTTTACTCTTTTCACAAACAACATAAATCAAAAATAGCATACACCTACCCAAGAGCTAAATTGGACTGTCATTCCCCATTGTCTATGGCACCTGGATTGTATTTAACATAATTAGTACTTGTGTTTTCCTCTTTGTATTGGGGGATTAGGGGTTTTATTGTGTATACACCATATTTATATATACTGCACCATTGGGCTGTAATGAATACAAGCGCAATTCATAGCATGGTATCAAGGCCAAAGGTCTTGATTTCGAATCTAGACATGAGGGGGAGTGTTGAAGTAAAGAGTAAATTGCCTGGTGCCCTACTCCATCAGATTAAGCTTTTAGTTCAACTAGCTAGTGCATGCAACTCAAAAGATCGGACCTTCCCCCATGTTGAGATGAAACATTTCCTCAAGCATTAAAAAAGTTTCACTGGTACCAGATAGAACATATGCATATGGTACCATCTTATTAATTGGCAGTGATGTACATCCAAATCATATAGTCAGACTAAAAAAAAAACTATTTCTCCCACAAAATTACTCCCTCCATCTACTTTTGATAGTCATATTTCCAAATCTGAAAATTTATCCAACAACCTATCATCTTAATAACTTTCTCGGATTTAATGCATGACTCTCCATTCTTCCACACAAGATTGGGCTGCATGGGTATCAAAAAATGTAAATATTAATGAATCGCTTGTTTACGAGGAATGACTAGTAGCATGTTTAAATAGATGATAAGTAGAATTACTTATCCTTGGTCTGTGTGCCAAGATGAAATATGACTATCAAAAGTAGATGGAGGGAGTATTAAATACTCCTTCCATTTCATATTATAAGTCGCTTTGACTTTTTCCTTTGTCAAACTTTTTTAAAGTTTGACCAAGTTTGTAGAAAAATATAGCAACATTTCCAACACAAAAGCAAACATATTATCAAAATATATTCAATGTTACATTTAATAAACTAATTTGGTGTTGTAGATGCTGCTACATTTTCCTATAAACTTGGTCAGATGTAAAGAAGTTTGATTAGGAAAAAAGTCAAAGCGATTTATAATATGGAACGGAGGGAGTATCAAGTTTCTTGGGTGCCAAGCATGAGATGTACCCCCCTCCATCCTTATTTAGATGATGTTTTAGGGTATTGGTTTTGTTTTTGAATAGCTTTTTATGTTTTGTAGGTATTATGTTCCCAAATTACCCCTAATAAAAGTAGTAGGTATATTGCTCCAATGAACTCATTTATTTCTAACCACTAGCATATTTCGTCTAGAGCTTGGCTTGGCTGTAACACGACCACTAGCACAATCCTGTTCAGCCACGCACCATGTCTACTTGTGATGAAATTGAACAAGCTGGACTAGCATAGTAATGTGGACAGCTCAGTAGAAATAAAGTATATTAATTAGGGGTAAGACAGTCTCAAGTAACACAATTGAACATCACCCTAGCCTGTGTGTTTGGCCCAAGATGACAAGTAATTCAATGGAGGGAGTAGCAAACTTGACTTGAATCCACATTTCACGTCAAAGTTGCCTGAATTCGTATAGCGGTTTCAACTATATTTACAACTTACCGTTATCCACTATAAGGTCAGTACTGAGACAATTATGCCAAAACCAGATTGATCAATACATAAGAGGGAAGATAAACCCCTAGTTGTCGTTTGCTCTATCATGCATGCATGCCGCCATCCAAAGTCATCCTGCTCGTTTCACCCATTGCAACAGACAACAAGGAGGGCAGGCAGACCAGGGAAGTTCAGAAACCTACCGGAGTGTCAGAAACGGGCAGGCAGCATTTTGATGCAGCTCTCCACCAGAAATACTCACCTCACAAATGTTCGCGGTAAAGCAACCGATCTAACACGCATCCAGGATCATGCATCAATGGTATTGTAATGTGCTACCTTTTGGTGTTGAAAAAAGGCTACCTTTTCAAGCATTCCCAACTCATAGCAGCCTTATTTTGACATGAAGCCTGATGCTTAAACATCAAGTTGGGATTATAGGCGAGTAACCCCCCCTACCGCGGAACAGATAACCTCGAACAAACCCAAACTACAGCACGATTCGACAACACAATTAACTGAAATACGAAATGAACTGATGGACAAACCCTAGGATTGGAGCCCCCCAACACCAAACTAAACCACCATGATTCGAACCCAACACGCCAAACCCAAAAAAATTACTATTGAAGAAACCCTAGGAATTGGAACCCCCCTCCCTAAATCACACACGAAGGCCGAGATTCTGCGAGGCCGCACTCGCAACGGCACGCGGGCCGTTGACCAACGAAAAGAAAAAAAAATCGCCCGAATCGGGGGGAGAATCACCCACACGCACGCACGCACGTCCAACGGGAGAGCGAGAGGAAACCCTACCTACCTGAGCAAAGGAGCCCCAACGGAGGAACGGACGGAAGCACCCGGCGGGGCGAGTGGAGAGGTGGTGGAAACCCTAGAGCAGCGCCATCGTCCTCCGCCTCCGCGCCCCCCAACGTCCCCGCTTCTACTCTCCCCGACAGACAAGCGCGCGATCTGGGAGGAAGGGGAAGGGGAAGAGGGGAGGGGAGTCGTCGGCGTCGCGGGGTGGGGGTGGGGGTGCGGGTGCGAGTGCGACCGTGCCGAGAGGTGAGAGAGTGACT
More
|
||||||||||
| CDS seq | ATGGATAGGGCGTCGAATTTCATACCTGGTCCTTATCAAGAACTCGTGGATGCCAAACCAATTAGATCGTTAGCTCCTATGTTCCCTGCACCCTTGGGAATCAATGTCAACCAGTCAAGCACCCCGCCTTTGGTATGTGTCACTCCGGTTGGCCAATTTCCTGTCGGTTTTGGTTCTGGAATCCTTCCTACCTTTGGTTCAACTACTGCCTTCACTACCACAGCAAATGGGGTTTCTTATACAAGCTACACCAATAATGGAGCTATTGATGCCACTCCTATCTCGGCATATAAGACCAGACCAGGCATTGTATCACTTGATGGCGATGAACCTTACTCAGGTTCAGCATCTGGACGGAAGTCCAAGAGATCATCTGGTTCAGCTGCTGATGGTTCAAATGGAGTTAAGTTCAAGCGCCCTAAGCCAGTTTACAAGAATTTTGTTGCTGGCAAGGAGCTTGCCTTTTTACCACCTTCATCCAGTGATCCCAGGGAGGTTGTGGAAGCAGTCCACATGACCTTTGAAGCACTTAGGCGTAGACATCTGCAACTGGATGAAATACAAGAGACTAGCAAACGGGCTGACCTGAAGGCTGGCGCCATCATGATGGCAAGCAATATCAGGGCTAATGTGGGAAAAAGGGTAGGACTTGTTCCTGGAGTTGAAATAGGGGATATTTTCTATTTCCGGATGGAGCTATGTATCATCGGGTTGCATGCTCCTAGTATGGGTGGCATTGATTATATGAGTGCTAAATTTGGAAGCGATGAGGATTCTGTGGCAATATGTATTGTTGCAGCAGGTGGCTATGAGAATGTGGATGATGACACAGATACACTGGTGTACAGTGGTTCAGGTGGCAATAGTAGGAACAGTGAGGAGAGGCATGATCAAAAGCTTGAGAGAGGTAACCTTGCTCTGGAGAGGAGCCTGCATAGGAAGAACGAGATCAGGGTTGTGCGGGGCTTCAGGGATCCATTTTGCCTGACTGGAAAAATCTACATATATGATGGCCTCTATAAGATTCAGGAGTCCTGGAAGGAGAGAACAAAGTCTGGTATCAATTGCTTCAAGTACAAACTGCTGCGTGAGCCTGGACAGCCTGATGGAGCTGCATTGTGGAAGATGACTCAAGGATGGATAGACAATCCAGCAAGCAGAGGCAGGGTTATATTACCTGATCTATCATCTGCGGCTGAAGCTCTCCCAGTTTGCCTTGTCAATGAGGTAGACCATGAGAAAGGACCTGGGCATTTCACCTATGCCAGTCAAGTCAAATACTTGAGGCCCCTCAGTTCTATGAAACCCTTACAGGGTTGCGGATGCCAGAGTGTTTGCCTGCCTGGTGATCCCAACTGTGCTTGTGGACAACATAACGGAGGTGACTTACCTTACAGCTCATCAGGACTTTTGGCGTGCCGCAAGCCAATAATTTATGAATGCGGTGATGCTTGCCATTGTACTACGAATTGCCGGAACAGAGTGACCCAAAAAGGGGTCAGATTTCACTTTGAGGTCTTCCGGACTGCAAATCGAGGCTGGGGTCTTCGCTGCTGGGATCCCATTCGTGCTGGTGCATTTATCTGTGAGTATACTGGTGAGGTCATTGATGAGCTCAAAGTTAATCTGGATGACAGTGAAGATGATTACATTTTTCAGACTGTATGTCCTGGTGAGAAGACATTAAAATTCAACTTTGGTCCTGAATTGATTGGTGAGGAGAGTACATATGTATCAGCTGATGAATTTGAGCCACTGCCCATCAAGATTAGTGCAAAAAAGATGGGAAATGTCTCACGTTTCATGAACCATAGTTGTTCCCCGAATGTTTTCTGGCAGCCAGTTCAGCATGACCATGGAGATGACAGCCACCCACATATCATGTTCTTTGCACTGAAGCACATTCCTCCCATGACAGAACTGACTTTTGACTATGGTGTTGCTGGATCTGAGTCTTCAGGTTCTCGTAGAACTAAGAACTGCTTTTGTGGATCATCAAACTGCCGGGGAGTATTTTAA
More
|
||||||||||
| Protein seq | MDRASNFIPGPYQELVDAKPIRSLAPMFPAPLGINVNQSSTPPLVCVTPVGQFPVGFGSGILPTFGSTTAFTTTANGVSYTSYTNNGAIDATPISAYKTRPGIVSLDGDEPYSGSASGRKSKRSSGSAADGSNGVKFKRPKPVYKNFVAGKELAFLPPSSSDPREVVEAVHMTFEALRRRHLQLDEIQETSKRADLKAGAIMMASNIRANVGKRVGLVPGVEIGDIFYFRMELCIIGLHAPSMGGIDYMSAKFGSDEDSVAICIVAAGGYENVDDDTDTLVYSGSGGNSRNSEERHDQKLERGNLALERSLHRKNEIRVVRGFRDPFCLTGKIYIYDGLYKIQESWKERTKSGINCFKYKLLREPGQPDGAALWKMTQGWIDNPASRGRVILPDLSSAAEALPVCLVNEVDHEKGPGHFTYASQVKYLRPLSSMKPLQGCGCQSVCLPGDPNCACGQHNGGDLPYSSSGLLACRKPIIYECGDACHCTTNCRNRVTQKGVRFHFEVFRTANRGWGLRCWDPIRAGAFICEYTGEVIDELKVNLDDSEDDYIFQTVCPGEKTLKFNFGPELIGEESTYVSADEFEPLPIKISAKKMGNVSRFMNHSCSPNVFWQPVQHDHGDDSHPHIMFFALKHIPPMTELTFDYGVAGSESSGSRRTKNCFCGSSNCRGVF |
||||||||||
| Function | Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 [UniProtKB/Swiss-Prot:Q93YF5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os05g0490700 | Os05t0490700-01 | Chr05 | 24115647 | 24121667 | - | irgsp1_rep | ||
| CDS seq | ATGGATAGGGCGTCGAATTTCATACCTGGTCCTTATCAAGAACTCGTGGATGCCAAACCAATTAGATCGTTAGCTCCTATGTTCCCTGCACCCTTGGGAATCAATGTCAACCAGTCAAGCACCCCGCCTTTGGTATGTGTCACTCCGGTTGGCCAATTTCCTGTCGGTTTTGGTTCTGGAATCCTTCCTACCTTTGGTTCAACTACTGCCTTCACTACCACAGCAAATGGGGTTTCTTATACAAGCTACACCAATAATGGAGCTATTGATGCCACTCCTATCTCGGCATATAAGACCAGACCAGGCATTGTATCACTTGATGGCGATGAACCTTACTCAGGTTCAGCATCTGGACGGAAGTCCAAGAGATCATCTGGTTCAGCTGCTGATGGTTCAAATGGAGTTAAGTTCAAGCGCCCTAAGCCAGTTTACAAGAATTTTGTTGCTGGCAAGGAGCTTGCCTTTTTACCACCTTCATCCAGTGATCCCAGGGAGGTTGTGGAAGCAGTCCACATGACCTTTGAAGCACTTAGGCGTAGACATCTGCAACTGGATGAAATACAAGAGACTAGCAAACGGGCTGACCTGAAGGCTGGCGCCATCATGATGGCAAGCAATATCAGGGCTAATGTGGGAAAAAGGGTAGGACTTGTTCCTGGAGTTGAAATAGGGGATATTTTCTATTTCCGGATGGAGCTATGTATCATCGGGTTGCATGCTCCTAGTATGGGTGGCATTGATTATATGAGTGCTAAATTTGGAAGCGATGAGGATTCTGTGGCAATATGTATTGTTGCAGCAGGTGGCTATGAGAATGTGGATGATGACACAGATACACTGGTGTACAGTGGTTCAGGTGGCAATAGTAGGAACAGTGAGGAGAGGCATGATCAAAAGCTTGAGAGAGGTAACCTTGCTCTGGAGAGGAGCCTGCATAGGAAGAACGAGATCAGGGTTGTGCGGGGCTTCAGGGATCCATTTTGCCTGACTGGAAAAATCTACATATATGATGGCCTCTATAAGATTCAGGAGTCCTGGAAGGAGAGAACAAAGTCTGGTATCAATTGCTTCAAGTACAAACTGCTGCGTGAGCCTGGACAGCCTGATGGAGCTGCATTGTGGAAGATGACTCAAGGATGGATAGACAATCCAGCAAGCAGAGGCAGGGTTATATTACCTGATCTATCATCTGCGGCTGAAGCTCTCCCAGTTTGCCTTGTCAATGAGGTAGACCATGAGAAAGGACCTGGGCATTTCACCTATGCCAGTCAAGTCAAATACTTGAGGCCCCTCAGTTCTATGAAACCCTTACAGGGTTGCGGATGCCAGAGTGTTTGCCTGCCTGGTGATCCCAACTGTGCTTGTGGACAACATAACGGAGGTGACTTACCTTACAGCTCATCAGGACTTTTGGCGTGCCGCAAGCCAATAATTTATGAATGCGGTGATGCTTGCCATTGTACTACGAATTGCCGGAACAGAGTGACCCAAAAAGGGGTCAGATTTCACTTTGAGGTCTTCCGGACTGCAAATCGAGGCTGGGGTCTTCGCTGCTGGGATCCCATTCGTGCTGGTGCATTTATCTGTGAGTATACTGGTGAGGTCATTGATGAGCTCAAAGTTAATCTGGATGACAGTGAAGATGATTACATTTTTCAGACTGTATGTCCTGGTGAGAAGACATTAAAATTCAACTTTGGTCCTGAATTGATTGGTGAGGAGAGTACATATGTATCAGCTGATGAATTTGAGCCACTGCCCATCAAGATTAGTGCAAAAAAGATGGGAAATGTCTCACGTTTCATGAACCATAGTTGTTCCCCGAATGTTTTCTGGCAGCCAGTTCAGCATGACCATGGAGATGACAGCCACCCACATATCATGTTCTTTGCACTGAAGCACATTCCTCCCATGACAGAACTGACTTTTGACTATGGTGTTGCTGGATCTGAGTCTTCAGGTTCTCGTAGAACTAAGAACTGCTTTTGTGGATCATCAAACTGCCGGGGAGTATTTTAA
More
|
|||||||
| Protein seq | MDRASNFIPGPYQELVDAKPIRSLAPMFPAPLGINVNQSSTPPLVCVTPVGQFPVGFGSGILPTFGSTTAFTTTANGVSYTSYTNNGAIDATPISAYKTRPGIVSLDGDEPYSGSASGRKSKRSSGSAADGSNGVKFKRPKPVYKNFVAGKELAFLPPSSSDPREVVEAVHMTFEALRRRHLQLDEIQETSKRADLKAGAIMMASNIRANVGKRVGLVPGVEIGDIFYFRMELCIIGLHAPSMGGIDYMSAKFGSDEDSVAICIVAAGGYENVDDDTDTLVYSGSGGNSRNSEERHDQKLERGNLALERSLHRKNEIRVVRGFRDPFCLTGKIYIYDGLYKIQESWKERTKSGINCFKYKLLREPGQPDGAALWKMTQGWIDNPASRGRVILPDLSSAAEALPVCLVNEVDHEKGPGHFTYASQVKYLRPLSSMKPLQGCGCQSVCLPGDPNCACGQHNGGDLPYSSSGLLACRKPIIYECGDACHCTTNCRNRVTQKGVRFHFEVFRTANRGWGLRCWDPIRAGAFICEYTGEVIDELKVNLDDSEDDYIFQTVCPGEKTLKFNFGPELIGEESTYVSADEFEPLPIKISAKKMGNVSRFMNHSCSPNVFWQPVQHDHGDDSHPHIMFFALKHIPPMTELTFDYGVAGSESSGSRRTKNCFCGSSNCRGVF
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os05g0490700 | Os05t0490700-02 | Chr05 | 24119038 | 24121645 | - | irgsp1_rep | ||
| CDS seq | GGTCGCACTCGCACCCGCACCCCCACCCCCACCCCGCGACGCCGACGACTCCCCTCCCCTCTTCCCCTTCCCCTTCCTCCCAGATCGCGCGCTTGTCTGTCGGGGAGAGTAGAAGCGGGGACGTTGGGGGGCGCGGAGGCGGAGGACGATGGCGCTGCTCTAGGGTTTCCACCACCTCTCCACTCGCCCCGCCGGGTGCTTCCGTCCGTTCCTCCGTTGGGGCTCCTTTGCTCAGGTAGGTAG
More
|
|||||||
| Protein seq | GRTRTRTPTPTPRRRRLPSPLPLPLPPRSRACLSGRVEAGTLGGAEAEDDGAALGFPPPLHSPRRVLPSVPPLGLLCSGR |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0490700 | RBH | 4.867783 | 3.529572 | 15.203926 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g41172 | RBH | 3.150328 | 2.194428 | 3.699904 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0811300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0021780 | RBH | 1.967056 | 15.164174 | 15.607930 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0021740 | RBH | 0.666432 | 6.511556 | 5.583806 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0021670 | RBH | 3.916897 | 26.897732 | 19.354170 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0021670 | RBH | 0.452390 | 0.734620 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0021770 | RBH | 14.240845 | 42.465431 | 33.391460 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0373700 | RBH | 16.6093175 | 39.6616115 | 40.669674 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0021320 | RBH | 0.702722 | 2.096160 | 3.353598 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0383400 | RBH | 24.209258 | 54.9827365 | 64.515104 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0021620 | RBH | 0.735718 | 0.668849 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0021550 | RBH | 1.013625 | 31.624277 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0021650 | RBH | 10.194909 | 68.638733 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0021720 | RBH | 2.145642 | 2.108440 | 3.529868 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0021700 | RBH | 0.571763 | 16.906965 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G021140 | RBH | 0.970150 | 10.310052 | 8.814810 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0021580 | RBH | 3.581550 | 20.672453 | 17.506083 |
