Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os04g0677100 | OGI:04101290 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr04:34586733-34588232 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACATGTGGAGTAGTAAAGTATAGGTACTTGGTAGCCTGATAGCGAGTACGAGTAGTGTACTGCTTATATATACTTCTAGCATGTATTGGGTCCGAAGCCGACGTATCCGTTGGCTGAGTCGACGGTGATCTGGATCCCTTCCTGCTGTATGTTCCCCAGGATGGAGATCCCCGACGACGACGGCGCGAACGCCAGGCAGAACACGGCGCCGCCGACCTCCACCAGCAGGTTCCTCGCCGGCAGCGTCAGCACGGCGCCCTGGTCGAAGTAGAACGACACGGTCGGCACGCGCACGCTCGCGTACCCGCTCAGGTCGTAGCACGTGTCGAGCAGCGACACGGCCGGCGAGCGCGGGAGCGCGCCCATGGCGCCGTCGAACGCGCCGCGCAGCGCGGCGTACGCCTCCCGCGGGAGGCGCGTCACGGCCGTGCCGGTGTCCATCACCACGCCGCCGGCGCCGTCCTCGGTGAGCTGGAACAGGCTGTCCTGCAGCGGCAGCCTCTCGCCGCCGACGCCGATCCCCGTCAGCCCGACGTAGTAGAAGCTCGACGCCTGGTTGTTGCGCACGAGCGGCACCCACACGGCGCCCACGGGGGACGGCCTCGGTCCGGCCGAGGACGAGCGACCCGGCGCCGCCGGCGCCGCGGCTCGCCAGGCAGTAGCTGAACACGCCGCCCGCCGCGCCGCCGAGCTGGCCAACGAGCGACATGGCGCCCCAGCCGAGGCCGAGCAGCCCGGCCGCCCCGACGAAGAGGCCGCTGTTGCGGTGGCCGCAGCCGATGGCGACGCCCTGCACCGCCGTGCCGCCTAACGTGAGCGTCTCGAGCGCGAGCTCCCCCTTGGTGTACGACCCGTCGCCATACGTCACCGAGTAGTCGCACTTCCCCGCGTCGCCGCCGCCGCCGCACCCGGTGCCCGACAGCGTCCGGCAGATGGCGGAGCCGCACGACACGCCGGAGAAGGACGACGAGGCGGCCGGGTCGAACAGCGGGTCGGTCTGCGCGTAGCACTGCTCGCAGGGGCGGCACTGCACCCAGATGACGTCGCTGCCGGAGTCCACGACGAGGTACTGATCCGTGGGCGGCGAGCCGACGCCGACGCGGACGAAGTACTCGCCGCTGCCGTCGTCGACGCCGGGCACCACCTCCGACACCAGGTCCTCGGGGAGGTACGGCGACGTCGAGGCCACCAGCCGCTTCTCCAGGTGCTCGACGCGGGCATTGTCGCGCGCGACGAGGCCGACGACTTGGTGCCGGCGCGACGGGTACGTGGCGCCGGAGATCGCGTCGCGGTGCACCAAGGAGAGCGAAGGGTTGTTGTTGTTGCGGCTACGGTGAACGGCCGACGCCGACGCCGACGACGACGATGACGCCGGCGTGGTGAAGTTGTGAGGGTTGATGTAGTGGAAGCGCGGCGGCGAGGCGGGGGAGACGATGAGCACCGATGTGGAGACGAAGAGGAGGAAGAGGATGACCTTGCCGTTGGCGACGAACTCCAT
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| CDS seq | ATGGAGTTCGTCGCCAACGGCAAGGTCATCCTCTTCCTCCTCTTCGTCTCCACATCGGTGCTCATCGTCTCCCCCGCCTCGCCGCCGCGCTTCCACTACATCAACCCTCACAACTTCACCACGCCGGCGTCATCGTCGTCGTCGGCGTCGGCGTCGGCCGTTCACCGTAGCCGCAACAACAACAACCCTTCGCTCTCCTTGGTGCACCGCGACGCGATCTCCGGCGCCACGTACCCGTCGCGCCGGCACCAAGTCGTCGGCCTCGTCGCGCGCGACAATGCCCGCGTCGAGCACCTGGAGAAGCGGCTGGTGGCCTCGACGTCGCCGTACCTCCCCGAGGACCTGGTGTCGGAGGTGGTGCCCGGCGTCGACGACGGCAGCGGCGAGTACTTCGTCCGCGTCGGCGTCGGCTCGCCGCCCACGGATCAGTACCTCGTCGTGGACTCCGGCAGCGACGTCATCTGGGTGCAGTGCCGCCCCTGCGAGCAGTGCTACGCGCAGACCGACCCGCTGTTCGACCCGGCCGCCTCGTCGTCCTTCTCCGGCGTGTCGTGCGGCTCCGCCATCTGCCGGACGCTGTCGGGCACCGGGTGCGGCGGCGGCGGCGACGCGGGGAAGTGCGACTACTCGGTGACGTATGGCGACGGGTCGTACACCAAGGGGGAGCTCGCGCTCGAGACGCTCACGTTAGGCGGCACGGCGGTGCAGGGCGTCGCCATCGGCTGCGGCCACCGCAACAGCGGCCTCTTCGTCGGGGCGGCCGGGCTGCTCGGCCTCGGCTGGGGCGCCATGTCGCTCGTTGGCCAGCTCGGCGGCGCGGCGGGCGGCGTGTTCAGCTACTGCCTGGCGAGCCGCGGCGCCGGCGGCGCCGGGTCGCTCGTCCTCGGCCGGACCGAGGCCGTCCCCCGTGGGCGCCGTGTGGGTGCCGCTCGTGCGCAACAACCAGGCGTCGAGCTTCTACTACGTCGGGCTGACGGGGATCGGCGTCGGCGGCGAGAGGCTGCCGCTGCAGGACAGCCTGTTCCAGCTCACCGAGGACGGCGCCGGCGGCGTGGTGATGGACACCGGCACGGCCGTGACGCGCCTCCCGCGGGAGGCGTACGCCGCGCTGCGCGGCGCGTTCGACGGCGCCATGGGCGCGCTCCCGCGCTCGCCGGCCGTGTCGCTGCTCGACACGTGCTACGACCTGAGCGGGTACGCGAGCGTGCGCGTGCCGACCGTGTCGTTCTACTTCGACCAGGGCGCCGTGCTGACGCTGCCGGCGAGGAACCTGCTGGTGGAGGTCGGCGGCGCCGTGTTCTGCCTGGCGTTCGCGCCGTCGTCGTCGGGGATCTCCATCCTGGGGAACATACAGCAGGAAGGGATCCAGATCACCGTCGACTCAGCCAACGGATACGTCGGCTTCGGACCCAATACATGCTAGAAGTATATATAAGCAGTACACTACTCGTACTCGCTATCAGGCTACCAAGTACCTATACTTTACTACTCCACATGTAG
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| Protein seq | MEFVANGKVILFLLFVSTSVLIVSPASPPRFHYINPHNFTTPASSSSSASASAVHRSRNNNNPSLSLVHRDAISGATYPSRRHQVVGLVARDNARVEHLEKRLVASTSPYLPEDLVSEVVPGVDDGSGEYFVRVGVGSPPTDQYLVVDSGSDVIWVQCRPCEQCYAQTDPLFDPAASSSFSGVSCGSAICRTLSGTGCGGGGDAGKCDYSVTYGDGSYTKGELALETLTLGGTAVQGVAIGCGHRNSGLFVGAAGLLGLGWGAMSLVGQLGGAAGGVFSYCLASRGAGGAGSLVLGRTEAVPRGRRVGAARAQQPGVELLLRRADGDRRRRREAAAAGQPVPAHRGRRRRRGDGHRHGRDAPPAGGVRRAARRVRRRHGRAPALAGRVAARHVLRPERVRERARADRVVLLRPGRRADAAGEEPAGGGRRRRVLPGVRAVVVGDLHPGEHTAGRDPDHRRLSQRIRRLRTQYMLEVYISSTLLVLAIRLPSTYTLLLHM |
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| Function | Protein ASPARTIC PROTEASE IN GUARD CELL 2 [UniProtKB/Swiss-Prot:Q9LHE3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os04g0677100 | Os04t0677100-00 | Chr04 | 34586733 | 34588232 | - | irgsp1_rep | ||
| CDS seq | ATGGAGTTCGTCGCCAACGGCAAGGTCATCCTCTTCCTCCTCTTCGTCTCCACATCGGTGCTCATCGTCTCCCCCGCCTCGCCGCCGCGCTTCCACTACATCAACCCTCACAACTTCACCACGCCGGCGTCATCGTCGTCGTCGGCGTCGGCGTCGGCCGTTCACCGTAGCCGCAACAACAACAACCCTTCGCTCTCCTTGGTGCACCGCGACGCGATCTCCGGCGCCACGTACCCGTCGCGCCGGCACCAAGTCGTCGGCCTCGTCGCGCGCGACAATGCCCGCGTCGAGCACCTGGAGAAGCGGCTGGTGGCCTCGACGTCGCCGTACCTCCCCGAGGACCTGGTGTCGGAGGTGGTGCCCGGCGTCGACGACGGCAGCGGCGAGTACTTCGTCCGCGTCGGCGTCGGCTCGCCGCCCACGGATCAGTACCTCGTCGTGGACTCCGGCAGCGACGTCATCTGGGTGCAGTGCCGCCCCTGCGAGCAGTGCTACGCGCAGACCGACCCGCTGTTCGACCCGGCCGCCTCGTCGTCCTTCTCCGGCGTGTCGTGCGGCTCCGCCATCTGCCGGACGCTGTCGGGCACCGGGTGCGGCGGCGGCGGCGACGCGGGGAAGTGCGACTACTCGGTGACGTATGGCGACGGGTCGTACACCAAGGGGGAGCTCGCGCTCGAGACGCTCACGTTAGGCGGCACGGCGGTGCAGGGCGTCGCCATCGGCTGCGGCCACCGCAACAGCGGCCTCTTCGTCGGGGCGGCCGGGCTGCTCGGCCTCGGCTGGGGCGCCATGTCGCTCGTTGGCCAGCTCGGCGGCGCGGCGGGCGGCGTGTTCAGCTACTGCCTGGCGAGCCGCGGCGCCGGCGGCGCCGGGTCGCTCGTCCTCGGCCGGACCGAGGCCGTCCCCCGTGGGCGCCGTGTGGGTGCCGCTCGTGCGCAACAACCAGGCGTCGAGCTTCTACTACGTCGGGCTGACGGGGATCGGCGTCGGCGGCGAGAGGCTGCCGCTGCAGGACAGCCTGTTCCAGCTCACCGAGGACGGCGCCGGCGGCGTGGTGATGGACACCGGCACGGCCGTGACGCGCCTCCCGCGGGAGGCGTACGCCGCGCTGCGCGGCGCGTTCGACGGCGCCATGGGCGCGCTCCCGCGCTCGCCGGCCGTGTCGCTGCTCGACACGTGCTACGACCTGAGCGGGTACGCGAGCGTGCGCGTGCCGACCGTGTCGTTCTACTTCGACCAGGGCGCCGTGCTGACGCTGCCGGCGAGGAACCTGCTGGTGGAGGTCGGCGGCGCCGTGTTCTGCCTGGCGTTCGCGCCGTCGTCGTCGGGGATCTCCATCCTGGGGAACATACAGCAGGAAGGGATCCAGATCACCGTCGACTCAGCCAACGGATACGTCGGCTTCGGACCCAATACATGCTAGAAGTATATATAAGCAGTACACTACTCGTACTCGCTATCAGGCTACCAAGTACCTATACTTTACTACTCCACATGTAG
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| Protein seq | MEFVANGKVILFLLFVSTSVLIVSPASPPRFHYINPHNFTTPASSSSSASASAVHRSRNNNNPSLSLVHRDAISGATYPSRRHQVVGLVARDNARVEHLEKRLVASTSPYLPEDLVSEVVPGVDDGSGEYFVRVGVGSPPTDQYLVVDSGSDVIWVQCRPCEQCYAQTDPLFDPAASSSFSGVSCGSAICRTLSGTGCGGGGDAGKCDYSVTYGDGSYTKGELALETLTLGGTAVQGVAIGCGHRNSGLFVGAAGLLGLGWGAMSLVGQLGGAAGGVFSYCLASRGAGGAGSLVLGRTEAVPRGRRVGAARAQQPGVELLLRRADGDRRRRREAAAAGQPVPAHRGRRRRRGDGHRHGRDAPPAGGVRRAARRVRRRHGRAPALAGRVAARHVLRPERVRERARADRVVLLRPGRRADAAGEEPAGGGRRRRVLPGVRAVVVGDLHPGEHTAGRDPDHRRLSQRIRRLRTQYMLEVYISSTLLVLAIRLPSTYTLLLHM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0677100 | RBH | 0.0 | 0.0 | 0.599351 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g58070 | RBH | 0.0 | 0.0 | 0.337403 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0031010 | RBH | 0.0 | 5.571218 | 0.317513 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0031790 | RBH | 0.0 | 3.075519 | 0.460025 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0031370 | RBH | 0.0 | 5.362830 | 0.752378 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0031190 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0031460 | RBH | 0.0 | 2.331846 | 0.397592 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0545400 | RBH | 0 | 0 | 0.0511975 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0030090 | RBH | 0.049102 | 0.245007 | 0.119894 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0551600 | RBH | 0.0860145 | 0.7026685 | 0.581224 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0030550 | RBH | 0.0 | 0.085449 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0030370 | RBH | 0.0 | 2.124500 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0030500 | RBH | 0.0 | 6.145979 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0031050 | RBH | 0.0 | 0.378011 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0031060 | RBH | 0.0 | 6.057578 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G030540 | RBH | 0.0 | 1.823822 | 0.181604 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0030240 | RBH | 0.0 | 7.980777 | 0.864524 |
