Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os03g0825300 | OGI:03096830 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr03:34663375-34668223 | ||||||||
| Gene Symbol | RLCK119, OsRLCK119, OsBSK4, BSK4 | ||||||||||
| DNA seq | ACGCCACTCCACCCCCCTCCCCCTCCTCCTCTCTCCCACCCCTCCTCGCGTAGTAGTAGTAGTAGTATTAGTCTATTCGAGTCCTACCAGTAGCTAGCTAAGCAGCCGAGACGGTGGCGGTGGAGGAGGTGGTGGTGGTGGTAGTAGTAGTACGCCGGGGAGAGAGAGCCGTTGCTGCTGCTGTGAGGTGAGGGCGAGATCTAGGAGGGAGGCGTCCATGGGAGCTCGCTGCTCCAAGCTCTCCGTGTGCTGGTGGCCGCCGCACTTCAAGTCGCCGCTGCTTGGTATGGTGCTCTCGCTCTCGCATTGGGTTGGGTTTGGGGGGGGGGGGGAGGGATTTGGTTGCTGGTTTCGGATGTGCGCGTGTTGATGATGGAGTGGGGTTGTTGCGGTGGCGCCCTGCATTTGGGCCTGGTTTTGCTGCGTTTTTTCTGGGGATCTTTTTTTTTTTTTTGGGGGGGGGGGGAACTCGGTTTGCGTCTCTAATTCTCCTGCTTTGGTTTGCGGTCGTGGAGCTGTTGATCCTGCTGGAATTCGCTGTGAAATGGGTCTGATCCAGTGGGTGGTTTTTGTGTGAACGCTCATCAACGATCCCATTTTTTTTTTCACTCTCTCTCTCGCTCTAGCAACCTGTTGCTGATTTGATGTTTTTTTTTGTTTGTTTTTTTTTGTCGGTTGGGTTGACGAATTCGGTTGCTCTTGCGAGTGTTTGGAGTTGGTTGCGTTTGATTCAGTGGGGTAATCTCTTGGCGTCGAGAGCATTGCGACCTCTTCGCGAGAATCCGTGGTTGATTCCGACGCGCGCGTCGTGCTTTTTTGGTGCTGATCCGAGCTATCTGTGTGGTTTTGTTGACGTGCAGAGAATGGCGCCGCCGCGGACGACGGCAGCGGCGTGCCGGTGTTCGCCGAGTACAGCCTCGACGAGCTACGGGTGGCGACCGACGGGTTCTCTCCCGAGCGCATCGTGTCGGAGCACGGCGAGAAGGCGCCCAACGTCGTCTACCGCGGCACCCTCTTCAGCACCGGCCGCACCGTGGCCATCAAGCGCTTCGGCCGCTCTGCCTGGCCCGACTCCCGCCAGTTCTTGGTTCGTGCAGCTTTGCTCCATCTGCATCAGTGCTTGCCTTGCCTTCGCCGCTTCGATTGAATGGCTCCGTTCTTGCGTGTGTGTGTGTGCAGGAGGAGGCGAGGGCTGTCGGGCAGCTGCGGAGTGTCCGGCTGGCCAACCTGATCGGCTGCTGCTGCGAGAATGGCGAGCGGCTGCTCGTCGCGGAGTTCATGCCGCACGAGACCTTGGCAAAGCATCTCTTCCACTGTATGTGTTTGGTGCTCACCTTTTTTTTCTTCTTGTTCTATACTAGCTGCAGCTACATATTGGGCTTTGGCAAATGTTGTTTCCGATTTGGTAGTACAAATGTAGGCATCAAAGATGATAAGATTGGGCCCCTTATTTAAGGATGGATGTGTTTTTGTCACCTGAATCTAATGTTGAATTGTTGCTTTCAGTTGGAGACGGTTGAAGTAATTCCTTCAACAAACTCTTTTTGCTGTTTCTTTTGTCTGGTCCTACATTTGTTCTTCTGGGTTAACTAGAAATTAATGCATTTATTCTTCTATAAATGCTTGTTATTAGTGTTCTGTTTGGAGTACTACACTAGTAGTTGGCATCAAGATGTTTTCATTATTTATTGCCTTTCTAGAATATATATCCAACTCAATTGCATCTAAGGTTCTTAGTATGGGTTATGGTAAATTGGAGAGCTTTTGCCTCCTGTTGCATTTAACGTTTTCAGTAGGAGTAGACACTTTGCATTTGGATTATCTACATTTTGCGCTCATGGTGGTTATCCTTGGCAGGGGAGACAAAGCCATTGAGCTGGGCAATGAGGGTACGAGCTGCATTCTATGTGGCTCAGGCATTGGAGTACTGCAGTAGCAAAGGGAGAGCTCTCTACCATGATCTGCATGCATACAGGGTTCTCTTTGATGTGGTGAGTCAGTACCTGTGCTACTTAGTAACTTCTTAGCTTGGGCTTCCAGTAATAAGGCATGTAATGTTTTGATGATAAATCATAGGATGGTAACCCCAGACTGTCGTGCTTCGGTCTGATGAAGAACAGCAGGGATGGGAAGAGCTATAGTACCAATTTGGCTTTCACGCCTCCTGAGTACCTTAAGACTGGTATGTGTTGTGCATACAAGCAAGTTTTTTTCTGTGAGTTATGCATTTCATGAATTTTATTTGTTAATGTTTGATCATGAAGTAAGGACTTGTAATATGAGCGTAATATGAGCTAACTCTTAGACACTTGTTGAGTATGTCCATGTTCTTTGCTAGTTATTTTCCCCAGTGGGGTAAATCATTCTATGCAAATGTTATTGCTGGGTTTCCATTGTTTATTTTTAGCTATTCACACCTTGTTTATTTTTAGCTATGGTACCATGGTTATGAACCACAGACATTAGGCAACAACGTAAGCTGCACGGACTTGTTTTTCATGAAGGGATAGTATTTAGCATTCGACCTCTCTCATAGTGAAGCAACAGAATTCTGTGTTGCAAAATCTACCTCGTTTTCTTATGACTTTGTCCATCAAAGACACAGTCTCTATTTCTTTACTAACCACTACATTTTCTGCAGGCAGAGTAATTCCAGAGAGTGTGGTGTACAGTTTTGGTACTATCTTGCTTGATCTCCTAAGTGGAAAACATATCCCACCAAGCCATGTAAGTTATCTATCCTTCCTGCTTTTCTGCTTACCCAAGATAAGTATTCACTTTGCTTGGTTTTGCTGTAGGCGCTTGACCTTATAAGAGGAAAAAATTACCTGGTGTTGATGGACTCTTGCTTAGAAGGCCATGTCTCCAGCTCTGATGGAACTGAGTTGATACGATTAGCATCCCGTTGCTTGCAGTATGAAGGTCGTGACCGGCCAAACCTGAAATCGGTGGTGTCTGCTCTTGGAAACCTCCAGAAAGATGCTTCTGTAATGTTTCTTTTTCTTGCTACTTTCTAGACTAGTAACAGTATTGTGTAATATTGAAAAAGCTGCAGGAAAAAAACTCCACACAATCGTTTGATAACTATTTTGTCTTCTGTCAACGTGCTACCTTTGCTTTTCATTTGATATTATGTTAGCATAAATGGTTTTTTGAAGTATGCGCCAACTCATCTTTCTCCTTATTAATGTGTCGCGCCTGCCAGCTTAATATTTCTTACTCGATGTTTAATTGTCTGTGCAGGCTCCTTCACATGCTTTACTAGGCATACAACATGATAAGGAAAATACAGAGCGAATTTCGTTATCTGCTATAGCGAAAGTTTATGCCAGAGCAGACCTTGATGAGGTTCATGAGATGCTGGAGAATGATGGATATTGTGAGGATGAAAGAGCAACATTCGAGGTATTAACTTTTTGTCAGTTAAGCTTATCATAATGAAATATTCTTGTTGGTACCATAGATCCTTCCCTAACTCATTGCTGCCATTTCCCTAAAAAGGAATAAACTGCCGGAACTTATTACTACATTATTGTCATCTTGGAATATTTCAATTGTGTAGATGAAACAAAATATGTTGAAAGCCCACACATTTTGTGGCATAGGATAGGAAGAAAGTAGATGGTCTATGTTGATGCCCATGCTCTTCGACCAATGAAACCTAATGGTTAGCTCATGTTTTAAGTGCCATTCTTTTGAGCTCGAGGCTAAACTTTTAACTAGTTTGACCATGCTTATTTTTATTGCTCTATAGGTCTGAAAGTACAATAGAACATTTATGTATCTTTTGAAGATATATTATACATCCATCAGTTGACCTGTAATATATCCCATACAAAACTTAACTTCTCACCATGTTGGCTGGTCCAAGTTTTTTTAACGTGAAGGTTTTCCATGTTTTCGCACTGCTCCCGTTCATATCTGACCCATACCTTAAAAATTTGGTGTATATAACAGGTATCTTTCCATTCCTGGACTGGCCAACAAGTATCTGATAGTATTCTTGTCAAGAAACATGGAGACAGTGCTTTTCAATCCAAGGATTTTGCGACTGCAGTTGAGTGCTACTCAAGGGTATGTATTAGAGTATCAAATGTTGTCCATGAATCTAATTCACTTTCCTGTATCTATACTCTGTTTTCGATAGCCTCGCTGCTTGTACATTAACAATTACTTTTCCTCAAATTAAGATTATGGTTAAAAAAACTGTGTTCCTGATTGATTTTCAGGTTGCTAAGCTGTGTTTTTAAACATTTTGCAGTTCATTGACACTGGTGTAATGGTGTCTCCGACTATGCTGGCACGACGAAGTTTCGTATACATGGTGCTCGGCAAGCTGCAAGAAGGCCTTGCGGATGCAAAGAAAGCAGCAGACATATCTCCTGAGTGGCCTACTGCACACTACCTTCAAGGGATGGCATATCTCGCCATGGGAATGGAGCCTGAAGGGCATGAAGAACTCAAGCAAGGCGCCGCTTTGGAAGCTGAAAGGAATGCTAGATAGAGATGAACTGTATAGCCCTCAAACATGATGTGATGCCTCCTCTCTTCTGTACCTAGATCGCCTGCATTTTGGGTGTCCTCCAGTGCTTTGCCACCAATAGGGCTGTTTTTTGGTCTTCCCTAACTTGTATTGGTATTTCCAGTGGTTTTACAACTCCTAGGTTGGCTGTTATGACACCTCCAATATATTCATAAGTACAAAAAATGGGCAACTAGCATTCAAATAGCAAACCGTGGATGTGAGATTGTAAAGCTTTAATGTTATTTCGTCACAATTCATGTATATACACAACTTGCAGACTTTTCTGAGGCGTCAAGAGTTAAAGACTGTTGTGAGTAATCAGCC
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| CDS seq | ATGGGAGCTCGCTGCTCCAAGCTCTCCGTGTGCTGGTGGCCGCCGCACTTCAAGTCGCCGCTGCTTGAGAATGGCGCCGCCGCGGACGACGGCAGCGGCGTGCCGGTGTTCGCCGAGTACAGCCTCGACGAGCTACGGGTGGCGACCGACGGGTTCTCTCCCGAGCGCATCGTGTCGGAGCACGGCGAGAAGGCGCCCAACGTCGTCTACCGCGGCACCCTCTTCAGCACCGGCCGCACCGTGGCCATCAAGCGCTTCGGCCGCTCTGCCTGGCCCGACTCCCGCCAGTTCTTGGAGGAGGCGAGGGCTGTCGGGCAGCTGCGGAGTGTCCGGCTGGCCAACCTGATCGGCTGCTGCTGCGAGAATGGCGAGCGGCTGCTCGTCGCGGAGTTCATGCCGCACGAGACCTTGGCAAAGCATCTCTTCCACTGGGAGACAAAGCCATTGAGCTGGGCAATGAGGGTACGAGCTGCATTCTATGTGGCTCAGGCATTGGAGTACTGCAGTAGCAAAGGGAGAGCTCTCTACCATGATCTGCATGCATACAGGGTTCTCTTTGATGTGGATGGTAACCCCAGACTGTCGTGCTTCGGTCTGATGAAGAACAGCAGGGATGGGAAGAGCTATAGTACCAATTTGGCTTTCACGCCTCCTGAGTACCTTAAGACTGGCAGAGTAATTCCAGAGAGTGTGGTGTACAGTTTTGGTACTATCTTGCTTGATCTCCTAAGTGGAAAACATATCCCACCAAGCCATGCGCTTGACCTTATAAGAGGAAAAAATTACCTGGTGTTGATGGACTCTTGCTTAGAAGGCCATGTCTCCAGCTCTGATGGAACTGAGTTGATACGATTAGCATCCCGTTGCTTGCAGTATGAAGGTCGTGACCGGCCAAACCTGAAATCGGTGGTGTCTGCTCTTGGAAACCTCCAGAAAGATGCTTCTGCTCCTTCACATGCTTTACTAGGCATACAACATGATAAGGAAAATACAGAGCGAATTTCGTTATCTGCTATAGCGAAAGTTTATGCCAGAGCAGACCTTGATGAGGTTCATGAGATGCTGGAGAATGATGGATATTGTGAGGATGAAAGAGCAACATTCGAGGTATCTTTCCATTCCTGGACTGGCCAACAAGTATCTGATAGTATTCTTGTCAAGAAACATGGAGACAGTGCTTTTCAATCCAAGGATTTTGCGACTGCAGTTGAGTGCTACTCAAGGTTCATTGACACTGGTGTAATGGTGTCTCCGACTATGCTGGCACGACGAAGTTTCGTATACATGGTGCTCGGCAAGCTGCAAGAAGGCCTTGCGGATGCAAAGAAAGCAGCAGACATATCTCCTGAGTGGCCTACTGCACACTACCTTCAAGGGATGGCATATCTCGCCATGGGAATGGAGCCTGAAGGGCATGAAGAACTCAAGCAAGGCGCCGCTTTGGAAGCTGAAAGGAATGCTAGATAG
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| Protein seq | MGARCSKLSVCWWPPHFKSPLLENGAAADDGSGVPVFAEYSLDELRVATDGFSPERIVSEHGEKAPNVVYRGTLFSTGRTVAIKRFGRSAWPDSRQFLEEARAVGQLRSVRLANLIGCCCENGERLLVAEFMPHETLAKHLFHWETKPLSWAMRVRAAFYVAQALEYCSSKGRALYHDLHAYRVLFDVDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLKTGRVIPESVVYSFGTILLDLLSGKHIPPSHALDLIRGKNYLVLMDSCLEGHVSSSDGTELIRLASRCLQYEGRDRPNLKSVVSALGNLQKDASAPSHALLGIQHDKENTERISLSAIAKVYARADLDEVHEMLENDGYCEDERATFEVSFHSWTGQQVSDSILVKKHGDSAFQSKDFATAVECYSRFIDTGVMVSPTMLARRSFVYMVLGKLQEGLADAKKAADISPEWPTAHYLQGMAYLAMGMEPEGHEELKQGAALEAERNAR |
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| Function | Serine/threonine-protein kinase BSK5 [UniProtKB/Swiss-Prot:Q9FIL1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os03g0825300 | Os03t0825300-01 | Chr03 | 34663375 | 34668215 | + | irgsp1_rep | ||
| CDS seq | ATGGGAGCTCGCTGCTCCAAGCTCTCCGTGTGCTGGTGGCCGCCGCACTTCAAGTCGCCGCTGCTTGAGAATGGCGCCGCCGCGGACGACGGCAGCGGCGTGCCGGTGTTCGCCGAGTACAGCCTCGACGAGCTACGGGTGGCGACCGACGGGTTCTCTCCCGAGCGCATCGTGTCGGAGCACGGCGAGAAGGCGCCCAACGTCGTCTACCGCGGCACCCTCTTCAGCACCGGCCGCACCGTGGCCATCAAGCGCTTCGGCCGCTCTGCCTGGCCCGACTCCCGCCAGTTCTTGGAGGAGGCGAGGGCTGTCGGGCAGCTGCGGAGTGTCCGGCTGGCCAACCTGATCGGCTGCTGCTGCGAGAATGGCGAGCGGCTGCTCGTCGCGGAGTTCATGCCGCACGAGACCTTGGCAAAGCATCTCTTCCACTGGGAGACAAAGCCATTGAGCTGGGCAATGAGGGTACGAGCTGCATTCTATGTGGCTCAGGCATTGGAGTACTGCAGTAGCAAAGGGAGAGCTCTCTACCATGATCTGCATGCATACAGGGTTCTCTTTGATGTGGATGGTAACCCCAGACTGTCGTGCTTCGGTCTGATGAAGAACAGCAGGGATGGGAAGAGCTATAGTACCAATTTGGCTTTCACGCCTCCTGAGTACCTTAAGACTGGCAGAGTAATTCCAGAGAGTGTGGTGTACAGTTTTGGTACTATCTTGCTTGATCTCCTAAGTGGAAAACATATCCCACCAAGCCATGCGCTTGACCTTATAAGAGGAAAAAATTACCTGGTGTTGATGGACTCTTGCTTAGAAGGCCATGTCTCCAGCTCTGATGAGGTTCATGAGATGCTGGAGAATGATGGATATTGTGAGGATGAAAGAGCAACATTCGAGGTATCTTTCCATTCCTGGACTGGCCAACAAGTATCTGATAGTATTCTTGTCAAGAAACATGGAGACAGTGCTTTTCAATCCAAGGATTTTGCGACTGCAGTTGAGTGCTACTCAAGGTTCATTGACACTGGTGTAATGGTGTCTCCGACTATGCTGGCACGACGAAGTTTCGTATACATGGTGCTCGGCAAGCTGCAAGAAGGCCTTGCGGATGCAAAGAAAGCAGCAGACATATCTCCTGAGTGGCCTACTGCACACTACCTTCAAGGGATGGCATATCTCGCCATGGGAATGGAGCCTGAAGGGCATGAAGAACTCAAGCAAGGCGCCGCTTTGGAAGCTGAAAGGAATGCTAGATAG
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| Protein seq | MGARCSKLSVCWWPPHFKSPLLENGAAADDGSGVPVFAEYSLDELRVATDGFSPERIVSEHGEKAPNVVYRGTLFSTGRTVAIKRFGRSAWPDSRQFLEEARAVGQLRSVRLANLIGCCCENGERLLVAEFMPHETLAKHLFHWETKPLSWAMRVRAAFYVAQALEYCSSKGRALYHDLHAYRVLFDVDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLKTGRVIPESVVYSFGTILLDLLSGKHIPPSHALDLIRGKNYLVLMDSCLEGHVSSSDEVHEMLENDGYCEDERATFEVSFHSWTGQQVSDSILVKKHGDSAFQSKDFATAVECYSRFIDTGVMVSPTMLARRSFVYMVLGKLQEGLADAKKAADISPEWPTAHYLQGMAYLAMGMEPEGHEELKQGAALEAERNAR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os03g0825300 | Os03t0825300-02 | Chr03 | 34663422 | 34668094 | + | irgsp1_rep | ||
| CDS seq | ATGGGAGCTCGCTGCTCCAAGCTCTCCGTGTGCTGGTGGCCGCCGCACTTCAAGTCGCCGCTGCTTGAGAATGGCGCCGCCGCGGACGACGGCAGCGGCGTGCCGGTGTTCGCCGAGTACAGCCTCGACGAGCTACGGGTGGCGACCGACGGGTTCTCTCCCGAGCGCATCGTGTCGGAGCACGGCGAGAAGGCGCCCAACGTCGTCTACCGCGGCACCCTCTTCAGCACCGGCCGCACCGTGGCCATCAAGCGCTTCGGCCGCTCTGCCTGGCCCGACTCCCGCCAGTTCTTGGAGGAGGCGAGGGCTGTCGGGCAGCTGCGGAGTGTCCGGCTGGCCAACCTGATCGGCTGCTGCTGCGAGAATGGCGAGCGGCTGCTCGTCGCGGAGTTCATGCCGCACGAGACCTTGGCAAAGCATCTCTTCCACTGGGAGACAAAGCCATTGAGCTGGGCAATGAGGGTACGAGCTGCATTCTATGTGGCTCAGGCATTGGAGTACTGCAGTAGCAAAGGGAGAGCTCTCTACCATGATCTGCATGCATACAGGGTTCTCTTTGATGTGGATGGTAACCCCAGACTGTCGTGCTTCGGTCTGATGAAGAACAGCAGGGATGGGAAGAGCTATAGTACCAATTTGGCTTTCACGCCTCCTGAGTACCTTAAGACTGGCAGAGTAATTCCAGAGAGTGTGGTGTACAGTTTTGGTACTATCTTGCTTGATCTCCTAAGTGGAAAACATATCCCACCAAGCCATGCGCTTGACCTTATAAGAGGAAAAAATTACCTGGTGTTGATGGACTCTTGCTTAGAAGGCCATGTCTCCAGCTCTGATGGAACTGAGTTGATACGATTAGCATCCCGTTGCTTGCAGTATGAAGGTCGTGACCGGCCAAACCTGAAATCGGTGGTGTCTGCTCTTGGAAACCTCCAGAAAGATGCTTCTGCTCCTTCACATGCTTTACTAGGCATACAACATGATAAGGAAAATACAGAGCGAATTTCGTTATCTGCTATAGCGAAAGTTTATGCCAGAGCAGACCTTGATGAGGTTCATGAGATGCTGGAGAATGATGGATATTGTGAGGATGAAAGAGCAACATTCGAGGTATCTTTCCATTCCTGGACTGGCCAACAAGTATCTGATAGTATTCTTGTCAAGAAACATGGAGACAGTGCTTTTCAATCCAAGGATTTTGCGACTGCAGTTGAGTGCTACTCAAGGTTCATTGACACTGGTGTAATGGTGTCTCCGACTATGCTGGCACGACGAAGTTTCGTATACATGGTGCTCGGCAAGCTGCAAGAAGGCCTTGCGGATGCAAAGAAAGCAGCAGACATATCTCCTGAGTGGCCTACTGCACACTACCTTCAAGGGATGGCATATCTCGCCATGGGAATGGAGCCTGAAGGGCATGAAGAACTCAAGCAAGGCGCCGCTTTGGAAGCTGAAAGGAATGCTAGATAG
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| Protein seq | MGARCSKLSVCWWPPHFKSPLLENGAAADDGSGVPVFAEYSLDELRVATDGFSPERIVSEHGEKAPNVVYRGTLFSTGRTVAIKRFGRSAWPDSRQFLEEARAVGQLRSVRLANLIGCCCENGERLLVAEFMPHETLAKHLFHWETKPLSWAMRVRAAFYVAQALEYCSSKGRALYHDLHAYRVLFDVDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLKTGRVIPESVVYSFGTILLDLLSGKHIPPSHALDLIRGKNYLVLMDSCLEGHVSSSDGTELIRLASRCLQYEGRDRPNLKSVVSALGNLQKDASAPSHALLGIQHDKENTERISLSAIAKVYARADLDEVHEMLENDGYCEDERATFEVSFHSWTGQQVSDSILVKKHGDSAFQSKDFATAVECYSRFIDTGVMVSPTMLARRSFVYMVLGKLQEGLADAKKAADISPEWPTAHYLQGMAYLAMGMEPEGHEELKQGAALEAERNAR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os03g0825300 | Os03t0825300-03 | Chr03 | 34663449 | 34668223 | + | irgsp1_rep | ||
| CDS seq | ATGGGAGCTCGCTGCTCCAAGCTCTCCGTGTGCTGGTGGCCGCCGCACTTCAAGTCGCCGCTGCTTGAGAATGGCGCCGCCGCGGACGACGGCAGCGGCGTGCCGGTGTTCGCCGAGTACAGCCTCGACGAGCTACGGGTGGCGACCGACGGGTTCTCTCCCGAGCGCATCGTGTCGGAGCACGGCGAGAAGGCGCCCAACGTCGTCTACCGCGGCACCCTCTTCAGCACCGGCCGCACCGTGGCCATCAAGCGCTTCGGCCGCTCTGCCTGGCCCGACTCCCGCCAGTTCTTGGAGGAGGCGAGGGCTGTCGGGCAGCTGCGGAGTGTCCGGCTGGCCAACCTGATCGGCTGCTGCTGCGAGAATGGCGAGCGGCTGCTCGTCGCGGAGTTCATGCCGCACGAGACCTTGGCAAAGCATCTCTTCCACTGGGAGACAAAGCCATTGAGCTGGGCAATGAGGGTACGAGCTGCATTCTATGTGGCTCAGGCATTGGAGTACTGCAGTAGCAAAGGGAGAGCTCTCTACCATGATCTGCATGCATACAGGGTTCTCTTTGATGTGGATGGTAACCCCAGACTGTCGTGCTTCGGTCTGATGAAGAACAGCAGGGATGGGAAGAGCTATAGTACCAATTTGGCTTTCACGCCTCCTGAGTACCTTAAGACTGGCAGAGTAATTCCAGAGAGTGTGGTGTACAGTTTTGGTACTATCTTGCTTGATCTCCTAAGTGGAAAACATATCCCACCAAGCCATGCGCTTGACCTTATAAGAGGAAAAAATTACCTGGTGTTGATGGACTCTTGCTTAGAAGGCCATGTCTCCAGCTCTGATGGAACTGAGTTGATACGATTAGCATCCCGTTGCTTGCAGTATGAAGGTCGTGACCGGCCAAACCTGAAATCGGTGGTGTCTGCTCTTGGAAACCTCCAGAAAGATGCTTCTGCTCCTTCACATGCTTTACTAGGCATACAACATGATAAGGAAAATACAGAGCGAATTTCGTTATCTGCTATAGCGAAAGTTTATGCCAGAGCAGACCTTGATGAGGTTCATGAGATGCTGGAGAATGATGGATATTGTGAGGATGAAAGAGCAACATTCGAGGTATCTTTCCATTCCTGGACTGGCCAACAAGTATCTGATAGTATTCTTGTCAAGAAACATGGAGACAGTGCTTTTCAATCCAAGGATTTTGCGACTGCAGTTGAGTGCTACTCAAGGTTCATTGACACTGGTGTAATGGTGTCTCCGACTATGCTGGCACGACGAAGTTTCGTATACATGGTGCTCGGCAAGCTGCAAGAAGGCCTTGCGGATGCAAAGAAAGCAGCAGACATATCTCCTGAGTGGCCTACTGCACACTACCTTCAAGGGATGGCATATCTCGCCATGGGAATGGAGCCTGAAGGGCATGAAGAACTCAAGCAAGGCGCCGCTTTGGAAGCTGAAAGGAATGCTAGATAG
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| Protein seq | MGARCSKLSVCWWPPHFKSPLLENGAAADDGSGVPVFAEYSLDELRVATDGFSPERIVSEHGEKAPNVVYRGTLFSTGRTVAIKRFGRSAWPDSRQFLEEARAVGQLRSVRLANLIGCCCENGERLLVAEFMPHETLAKHLFHWETKPLSWAMRVRAAFYVAQALEYCSSKGRALYHDLHAYRVLFDVDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLKTGRVIPESVVYSFGTILLDLLSGKHIPPSHALDLIRGKNYLVLMDSCLEGHVSSSDGTELIRLASRCLQYEGRDRPNLKSVVSALGNLQKDASAPSHALLGIQHDKENTERISLSAIAKVYARADLDEVHEMLENDGYCEDERATFEVSFHSWTGQQVSDSILVKKHGDSAFQSKDFATAVECYSRFIDTGVMVSPTMLARRSFVYMVLGKLQEGLADAKKAADISPEWPTAHYLQGMAYLAMGMEPEGHEELKQGAALEAERNAR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0825300 | RBH | 0.0 | 0.000000 | 1.481203 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g61010 | RBH | 0.0 | 0.000000 | 0.372157 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0040370 | RBH | 0.089780 | 6.184267 | 4.188140 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0040050 | RBH | 0.0 | 3.672338 | 0.925443 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0040120 | RBH | 0.0 | 11.230477 | 0.373833 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0040340 | RBH | 0.0 | 1.102509 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0039890 | RBH | 0.0 | 22.419363 | 8.870363 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0591300 | RBH | 6.448292 | 21.72658 | 29.4284555 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0039640 | RBH | 0.0 | 1.795087 | 0.609259 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0594100 | RBH | 6.064696 | 13.315929 | 38.7221355 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0040230 | RBH | 0.0 | 0.229695 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0040140 | RBH | 0.0 | 16.081667 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0039820 | RBH | 0.0 | 9.258422 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0039890 | RBH | 0.180181 | 1.508239 | 0.691246 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0039940 | RBH | 0.000000 | 9.822524 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G039690 | RBH | 0.0 | 11.062487 | 1.328559 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0039440 | RBH | 0.0 | 32.035370 | 3.064445 |
