Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os03g0703300 | OGI:03079720 | 15/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr03:28260587-28266450 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTGAATAATGGCTGCTGCTTATAATAAATTAATCAACTTCATGGATCATTCTGTACATGGAGAGAACTTGAGGCATCTTGTTTATCCAGATTACAGATTATTGTAAGCTTTGGACTGCTATAAGAAAATAAATATTAACACTTGCTATACTAGTGGAGTCGCTTCTTAAAGCCCTCTACTCGTGCAAACTGGAGTAGCTGATTAAAAAAAAGTGTTCTTTAGCATATGGATTTTACTTTTACAAGATGTATGCATATTGCAAAATAAACTTCCAAATTGCGCTTAGGTGGCACCGTGGCATGTCCGTTCTTCTTGATTAAACTTTTAGCCATTCCCCGGGATACACGGCACCCGCCTTTGTTTTCTCTACTTTCTTTGCCCTTGAGTCGCCCTGAACTGATTTTTCAGAGAATGGAGCTATAACACCTGCGAAGCTTCTGTCCTTGCTCCTTCTGCAGCAAAGTTTGGATTAATTTCATAATATATAGGAGTATTAGTGTTCAGTACACCAAACGGCACACGACGATAATTTGATACTGTGGTACCATTACCTGAGATGAGCTATGAAGAACACTGCGCCGACAAGTGTAATTCCTCCAGCAACAGACTTTAGCATCCCTTTCCCTGATTTGGGAACATCATTCTCATTCATTTGAGCAGAGCTGTCATTTTCAGCTTTATATTCTGATTCCACCTGTTTATCTTCTTTTTGGGAAACGTCCTGGATGCCAAAGAAATGTTAAAGCGTGTTTGCTGTACATGAGACAAAATGATGACTATGTTAAAAGTAGTACTAGCATACACAGGTTTGGCATTTCAGGAGGTACCGTTTCATTCCCACAACGGAATTCGAGTTCCAGCCCTCGGCATGCACTATCATCTTCAGAAACTGCTGGCAATTTGCCACAAGCACTGTCTATTGGGGTTAAACTCGAGTATGGTGTACTGTCGCAATTTGAACATACAGACTCCCCATCACAGGCAAGCAGATCACATTGTTGATCAAAGGTGACCTTTTGGAGGGCATCGCTTTCTTTTTCGGGATCGTTAGCAAATCTTTTCCCATTTCCGTTAAGAGGCTCGAGATGTTCGCCATGAGTCCTTTTAGCCTTGCTGCTGTCAACTACCAAATGACTGCTTATGGAATCTGACTCTTCTGAACTTAATGAACACCTAATTGTTCTAGTTCTTGAACACTGGTCAGTTGGAGATTCAATACAGCAATATGATTCATTTTTGTGAAATAAAGGAGTTGAACCAACAGAATCAGATTCCATATTGCCGAAATCAATCGATCCAACTGATTCAGACAATGACTTCTCTTCATGCATACCATGCTCACTATCTCCATAGCCTTCCTTTTCTTCCTTGGGCATGTTGCCCGATTTCAAAAGTGTGGAAATATTGTCTTCACTGACTGAGTCCTCAGGTTCTAATGCAGAGAGCTTACTTTCAGCTTCATCAGAATCATAATGTGTTTCACATTGTTGATCATTCTCTGCACCAAAAACTCTCTGGAAATATATATCAAAATTAATGAGTTGATTGTTTTAAACAATGATAGTATTGACTTAAAATAAAGGATCAATTAGCAAGAACATGCCAATAAAACTGATCCTTTCTCCCCAAAAAAAAAAACTGATCCTTTCAAATAGCTTACCTGCTGATTTAATGCCTTAGAGTTGGCACTTGGACTGTAACCACTTGAACCAGATGAACTACATTGTGGTTGCTCCAGACTTCTCCGGATGCCTCCAACAATGTAGTTGGGCATGGCTATTGTATGAGTGACAATATCAAAATCAGGCACCTGTCACCAGAGAGCAGAAACACACCAATTAAATCTTTCAGGATGTGTATTGTGCAATGATTAGCTGATTGAATTATTTTTAATAAATGGTTTCATAAGAATCTAGGGCTTACAGTCAGGCGCATCGTCCGAGCCTTCTTAGATAGCAAGCGTATGCACATACAAACTTTCCGAACATTTCTTTTCTCAACCACATCAGAAGGGGTAAACAAATCAATTCCAGCTAACCCGAGAATTTGACATATCTGGAAAGGAAAAATATCATATCAAGCCACCTTTCAGAAGGGAAAACAAACATCAAGAAAGTAAAAGATATGGGAATGCTATCAGAATTCAGAAGCAAGACAGCCATCCAGATTCAGCATGTACTCTGCACATAAAAAATGATTTCGATCCAATTTATAGAAAGTAAAGCTTTGTTAAGAATATTTGGAGAATCTATACCAGTTTCTCGGCTAGAATAGAAATGTTTGACACCATTAACAAGCACTCTTTCAATGAAAAGAGAAAGAGTAAATGTATGTGTGATGGCAAAAAAAAATCCCATGAATTCTTTCACTCTACTGTTATCCAAATTAATGCGCTTGAAGTTGAATCAAGATAGTAACTAAAGTAAGCTGCTAAGAAGAGAGCATCCAATGGTCAATACCTTCAAAAACGAGTCAACTTTTGGATAGGGCATGTATTTTCCATTGCTCTTACCAGACGATGTTCTCTCATAAATATACACCTTGGATTGCTTCATTTGTTCTTTGTTCATTCTCACAAGCCTTTTCCACAGTACTTTGGAAACTTGAAATCTGTCAACATGCATTAAACAAGTAAGCCATTAGACAGCCTGAAAAGAGATTTAGAGCCTGGAAAGGAAACACAGGGAGAGGGCTGTCTTTTTATTCTTCCCAAAAATAAGAGAATAAATATGATAGTAATTTATTTCATTGCTCCTCTAATTAAGAATTACCTTCAGTTGTTTCAAGATAGAACATATCTAGAATAGGAAAATGTAAAAAATGTAATATAGAACTGAATTGCTTGCTGCCCAACAATAAATTGTATCATTTGCCAATTATATGATTTTTTTCTGGGTAACACTTTATAGTGGAAACATAAGCCTAATTACTAATTCCATATAGCCAAAACTACCTATCATTTGAAGTATAGTATTCGTCACTCTGATCCTATATTTGTGTAATTTTACCATGTACAATTACAGCATTGAAACTTTATAGTGGAAACTTAAGGCTAATTACTAATTTCATATAGCCAAAACTACCTATCATTTGAAGTATATTAGTGACTCTGATCTTATATTTGTGTAATTTTACCATGTAGAGTTACAGAATTGTAAATTCTTACAAAAGCCAACCAAGTGACACCAAGTATCAGGATTGCATGCTAGACAGTACTATAAATACAAATAAAAAACACTGCATCTATTGTGAAGAACCTAAATCTTACAGTAACTCTCCATCAGCAAGAAGGTCTGCAACTATAACGGCTTCATCAAACCTAAGATGGAGAACTTCACCAAGCCAGATTTTTGTCTGTGTCTGAAAGAACATAATTGAACTGAGAAATCAGGATAATAAGGATGACTAAAAGTATGATAAAGGTGTAATTGTAGGCTTTTACTTAATAAAGGTGTAATTGAAGGCTTTGAGATATTTCGGGGTTGCCCCGCTTGTATGTAATTAGAAGTTGTTCTGTATATATGTTGTAGTGCGCCCTGTGCTCTGTTGCTTGGCATGGTAGGAAACAAGATATATTCTTGCACTCCTTAATATACTCCGGCTGGCGACTTTGCCAGCCCGGCGAAAAAAAATATTGTAAAAATTGGTAGCAGGTACTGACCTGCCTAAACGACCGATAATGCATCTGCATTGGTAACTACTCCTATACAGTAATAAGTAAGGTAACCATATCCTTTATACAGATCAGTAGACCCAATATCTATAAGACTGTTTATAATAGATGGGTGATAAGCAAAAGAAAAGGTTTAATATGTTATCTTAAATAAGGATATCAGATGATCTTCGTAATCACCAATTCCTGAAGAAAATAATATAGAAGTACAGGGTTGAGAGTGACAGTGTACAAATTATGAACAACTGTAGTTGTGTCCAGGATATATATTTGTACCATAACACTGTGTGCAATATAACTTAGTATATGTTTGCAAGTAATAAAGTTAGATACATCCCATTCAAAATTTGATGTTTAAGTTTAAGTGTTTAACAGATCTTAAAATGTCGAATGGAATGTATATCTCATACTTATCGCTCACAGTTTTTAATGAAAAAAAATGTAGAGTAAACCTGAAAGTTTGTGGTCCAAATATACTCCTTAACATCCCAAACTATTGCAGTAGCTACAGTAGTACGTAGTGGCTGCATTCATGTCTTTGACTAACTTTGTGTAATTTCTTGTAAGATAAATATTAAAGCACATCATTGTAATCTTTTTGCCAAGTACGTTGAGCACCACACAAGGACTAAGTTAACAATATTATGTAAAGTGATTCCAGCATTGGCCATTTCGGTACTCGACAAATGAGCAACAGCTGCTAAGACTGGTAACATAATAAATTTATCAAAAGATACTTCAACATGAGCTAATCAATACCAATACCATTCAATTCTACCTTTTATACCATTTTTCAACTCTGGCTCTGAAAAAACCTAGGAGGATATGAAATGCAAGTAGGAGTACAAAATAACCCTTTGCCCTAGAAAAGACAAAGAAAGAGTTGAAAAGAATCTTGTACAACCATGACCACACAGAATCTTGTCAACTAGTAATCCATTCTCGTTTGCCCCCCTGCAACTTCCTCATATATTACTTATTTTTAAGGGGCAATTGCAAATTTACCACTGCTTTGAATCGTTATTGCAAGACTGCCACTAGAAAATTGCAAAAATGCCATTAGAATTGTCATTCGAGTGGCATCCTTGTAAAATTTAAAAAAAACGGTGGTAAATTTACAAATGGCCCTTTTTTAAATACGCAAGAGGCTCGCTTATTATTGAAAAATGAGAAAAATCTAGACAGAATCTAACGACTAATTTTGCGATAAAAAGGACGGCGAAATGCAGTAAAGAACTACTCAAACTTCTGAAACTCCTGCACCAGCACAACTGCTTCTTCAGTGATTTCTTTGAAGAGCTGCCACCATGTTCTTCTTGAAAACTCTACTATCAATGAAAACAAGAGCGGCAATGGTGTCGAAGCCTTTGCATCTTCACAAATCCTCTCGCCGTCGTTCTGAACTTCTCATACTAGAAAAATGAACAACATGAAATGCCTGATACTGGATTTTGAATTAGCTAAGAGGAGAGAGCAATCACACGGCAGTTTAGTAACTTCAGAAATCAACCCGCATATGCCATTTGGAGTCCGTGAAATCAGAGAAACCAATCCTAAACATCTCGCATATACAACATGCGGATGGAAAACCCGAAACAGATAGCATCAAGCCATGAACTCATTGAAGGCAGCTCGAATCACTGGAGCATCTCCGGCGCCCATTGGAGAGAACGGCGCCGACGAACGCCGGCCGTCGCCAACAGAGCCACCGGCCGGCCACGGCCTTTACTGTTCCATTAACCCGGACTCCGACGACCCGACTGAAGCACACACAAGATTTAGTTCAGTACACGGCGCATTTCGCCGGCACCGCGACCGACCTGGAGGAAGGCGTCGTCGAGCTCGCGGAAGCTGGACGCGGGCGACGCCTGGTCCACGCGCACCACCCCGCCCTGCTGCTTCTGCTGCTGCTGCTGCGCCGTCCTCATCGCGTCCCTCCGCCGCCGCCCGCCGCCGATCACGAAGCGGCCCGGCGCCCGAGGTGGCTCATCCCAGATAGATCCTCGGTCGCCGCGCTCGCACTCACCCCTGGAGCCTCGGTTTCCTCGTCTGCTCTGCTGGCTTCAGCGGCTAGCTATGGCGGTGGTGGTGGTGGTGGTGGTGCTCGTGCGTGCGTGCGTGGGGGTGTGGTTTGGAGGCGACGCCGCGGCCGCGTGTCGCGTCCTGCGCCGGATAAGCGCGGCGCTGCCCC
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| CDS seq | ATGAGGACGGCGCAGCAGCAGCAGCAGAAGCAGCAGGGCGGGGTGGTGCGCGTGGACCAGGCGTCGCCCGCGTCCAGCTTCCGCGAGCTCGACGACGCCTTCCTCCAGACACAGACAAAAATCTGGCTTGGTGAAGTTCTCCATCTTAGGTTTGATGAAGCCGTTATAGTTGCAGACCTTCTTGCTGATGGAGAGTTACTATTTCAAGTTTCCAAAGTACTGTGGAAAAGGCTTGTGAGAATGAACAAAGAACAAATGAAGCAATCCAAGGTGTATATTTATGAGAGAACATCGTCTGGTAAGAGCAATGGAAAATACATGCCCTATCCAAAAGTTGACTCGTTTTTGAAGATATGTCAAATTCTCGGGTTAGCTGGAATTGATTTGTTTACCCCTTCTGATGTGGTTGAGAAAAGAAATGTTCGGAAAGTTTGTATGTGCATACGCTTGCTATCTAAGAAGGCTCGGACGATGCGCCTGACTGTGCCTGATTTTGATATTGTCACTCATACAATAGCCATGCCCAACTACATTGTTGGAGGCATCCGGAGAAGTCTGGAGCAACCACAATGTAGTTCATCTGGTTCAAGTGGTTACAGTCCAAGTGCCAACTCTAAGGCATTAAATCAGCAGAGAGTTTTTGGTGCAGAGAATGATCAACAATGTGAAACACATTATGATTCTGATGAAGCTGAAAGTAAGCTCTCTGCATTAGAACCTGAGGACTCAGTCAGTGAAGACAATATTTCCACACTTTTGAAATCGGGCAACATGCCCAAGGAAGAAAAGGAAGGCTATGGAGATAGTGAGCATGGTATGCATGAAGAGAAGTCATTGTCTGAATCAGTTGGATCGATTGATTTCGGCAATATGGAATCTGATTCTGTTGGTTCAACTCCTTTATTTCACAAAAATGAATCATATTGCTGTATTGAATCTCCAACTGACCAGTGTTCAAGAACTAGAACAATTAGGTGTTCATTAAGTTCAGAAGAGTCAGATTCCATAAGCAGTCATTTGGTAGTTGACAGCAGCAAGGCTAAAAGGACTCATGGCGAACATCTCGAGCCTCTTAACGGAAATGGGAAAAGATTTGCTAACGATCCCGAAAAAGAAAGCGATGCCCTCCAAAAGGTCACCTTTGATCAACAATGTGATCTGCTTGCCTGTGATGGGGAGTCTGTATGTTCAAATTGCGACAGTACACCATACTCGAGTTTAACCCCAATAGACAGTGCTTGTGGCAAATTGCCAGCAGTTTCTGAAGATGATAGTGCATGCCGAGGGCTGGAACTCGAATTCCGTTGTGGGAATGAAACGGACGTTTCCCAAAAAGAAGATAAACAGGTGGAATCAGAATATAAAGCTGAAAATGACAGCTCTGCTCAAATGAATGAGAATGATGTTCCCAAATCAGGGAAAGGGATGCTAAAGTCTGTTGCTGGAGGAATTACACTTGTCGGCGCAGTGTTCTTCATAGCTCATCTCAGAAGGAGCAAGGACAGAAGCTTCGCAGGTGTTATAGCTCCATTCTCTGAAAAATCAGTTCAGGGCGACTCAAGGGCAAAGAAAGTAGAGAAAACAAAGGCGGGTGCCGTGTATCCCGGGGAATGGCTAAAAGTTTAA
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| Protein seq | MRTAQQQQQKQQGGVVRVDQASPASSFRELDDAFLQTQTKIWLGEVLHLRFDEAVIVADLLADGELLFQVSKVLWKRLVRMNKEQMKQSKVYIYERTSSGKSNGKYMPYPKVDSFLKICQILGLAGIDLFTPSDVVEKRNVRKVCMCIRLLSKKARTMRLTVPDFDIVTHTIAMPNYIVGGIRRSLEQPQCSSSGSSGYSPSANSKALNQQRVFGAENDQQCETHYDSDEAESKLSALEPEDSVSEDNISTLLKSGNMPKEEKEGYGDSEHGMHEEKSLSESVGSIDFGNMESDSVGSTPLFHKNESYCCIESPTDQCSRTRTIRCSLSSEESDSISSHLVVDSSKAKRTHGEHLEPLNGNGKRFANDPEKESDALQKVTFDQQCDLLACDGESVCSNCDSTPYSSLTPIDSACGKLPAVSEDDSACRGLELEFRCGNETDVSQKEDKQVESEYKAENDSSAQMNENDVPKSGKGMLKSVAGGITLVGAVFFIAHLRRSKDRSFAGVIAPFSEKSVQGDSRAKKVEKTKAGAVYPGEWLKV |
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| Function | Protein OPAQUE10 [UniProtKB/Swiss-Prot:P0DKL2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os03g0703300 | Os03t0703300-01 | Chr03 | 28260597 | 28266450 | - | irgsp1_rep | ||
| CDS seq | ATGAGGACGGCGCAGCAGCAGCAGCAGAAGCAGCAGGGCGGGGTGGTGCGCGTGGACCAGGCGTCGCCCGCGTCCAGCTTCCGCGAGCTCGACGACGCCTTCCTCCAGACACAGACAAAAATCTGGCTTGGTGAAGTTCTCCATCTTAGGTTTGATGAAGCCGTTATAGTTGCAGACCTTCTTGCTGATGGAGAGTTACTATTTCAAGTTTCCAAAGTACTGTGGAAAAGGCTTGTGAGAATGAACAAAGAACAAATGAAGCAATCCAAGGTGTATATTTATGAGAGAACATCGTCTGGTAAGAGCAATGGAAAATACATGCCCTATCCAAAAGTTGACTCGTTTTTGAAGATATGTCAAATTCTCGGGTTAGCTGGAATTGATTTGTTTACCCCTTCTGATGTGGTTGAGAAAAGAAATGTTCGGAAAGTTTGTATGTGCATACGCTTGCTATCTAAGAAGGCTCGGACGATGCGCCTGACTGTGCCTGATTTTGATATTGTCACTCATACAATAGCCATGCCCAACTACATTGTTGGAGGCATCCGGAGAAGTCTGGAGCAACCACAATGTAGTTCATCTGGTTCAAGTGGTTACAGTCCAAGTGCCAACTCTAAGGCATTAAATCAGCAGAGAGTTTTTGGTGCAGAGAATGATCAACAATGTGAAACACATTATGATTCTGATGAAGCTGAAAGTAAGCTCTCTGCATTAGAACCTGAGGACTCAGTCAGTGAAGACAATATTTCCACACTTTTGAAATCGGGCAACATGCCCAAGGAAGAAAAGGAAGGCTATGGAGATAGTGAGCATGGTATGCATGAAGAGAAGTCATTGTCTGAATCAGTTGGATCGATTGATTTCGGCAATATGGAATCTGATTCTGTTGGTTCAACTCCTTTATTTCACAAAAATGAATCATATTGCTGTATTGAATCTCCAACTGACCAGTGTTCAAGAACTAGAACAATTAGGTGTTCATTAAGTTCAGAAGAGTCAGATTCCATAAGCAGTCATTTGGTAGTTGACAGCAGCAAGGCTAAAAGGACTCATGGCGAACATCTCGAGCCTCTTAACGGAAATGGGAAAAGATTTGCTAACGATCCCGAAAAAGAAAGCGATGCCCTCCAAAAGGTCACCTTTGATCAACAATGTGATCTGCTTGCCTGTGATGGGGAGTCTGTATGTTCAAATTGCGACAGTACACCATACTCGAGTTTAACCCCAATAGACAGTGCTTGTGGCAAATTGCCAGCAGTTTCTGAAGATGATAGTGCATGCCGAGGGCTGGAACTCGAATTCCGTTGTGGGAATGAAACGGACGTTTCCCAAAAAGAAGATAAACAGGTGGAATCAGAATATAAAGCTGAAAATGACAGCTCTGCTCAAATGAATGAGAATGATGTTCCCAAATCAGGGAAAGGGATGCTAAAGTCTGTTGCTGGAGGAATTACACTTGTCGGCGCAGTGTTCTTCATAGCTCATCTCAGAAGGAGCAAGGACAGAAGCTTCGCAGGTGTTATAGCTCCATTCTCTGAAAAATCAGTTCAGGGCGACTCAAGGGCAAAGAAAGTAGAGAAAACAAAGGCGGGTGCCGTGTATCCCGGGGAATGGCTAAAAGTTTAA
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| Protein seq | MRTAQQQQQKQQGGVVRVDQASPASSFRELDDAFLQTQTKIWLGEVLHLRFDEAVIVADLLADGELLFQVSKVLWKRLVRMNKEQMKQSKVYIYERTSSGKSNGKYMPYPKVDSFLKICQILGLAGIDLFTPSDVVEKRNVRKVCMCIRLLSKKARTMRLTVPDFDIVTHTIAMPNYIVGGIRRSLEQPQCSSSGSSGYSPSANSKALNQQRVFGAENDQQCETHYDSDEAESKLSALEPEDSVSEDNISTLLKSGNMPKEEKEGYGDSEHGMHEEKSLSESVGSIDFGNMESDSVGSTPLFHKNESYCCIESPTDQCSRTRTIRCSLSSEESDSISSHLVVDSSKAKRTHGEHLEPLNGNGKRFANDPEKESDALQKVTFDQQCDLLACDGESVCSNCDSTPYSSLTPIDSACGKLPAVSEDDSACRGLELEFRCGNETDVSQKEDKQVESEYKAENDSSAQMNENDVPKSGKGMLKSVAGGITLVGAVFFIAHLRRSKDRSFAGVIAPFSEKSVQGDSRAKKVEKTKAGAVYPGEWLKV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os03g0703300 | Os03t0703300-02 | Chr03 | 28260587 | 28263122 | - | irgsp1_rep | ||
| CDS seq | ATTTATGAGAGAACATCGTCTGGTAAGAGCAATGGAAAATACATGCCCTATCCAAAAGTTGACTCGTTTTTGAAGATATGTCAAATTCTCGGGTTAGCTGGAATTGATTTGTTTACCCCTTCTGATGTGGTTGAGAAAAGAAATGTTCGGAAAGTTTGTATGTGCATACGCTTGCTATCTAAGAAGGCTCGGACGATGCGCCTGACTGTGCCTGATTTTGATATTGTCACTCATACAATAGCCATGCCCAACTACATTGTTGGAGGCATCCGGAGAAGTCTGGAGCAACCACAATGTAGTTCATCTGGTTCAAGTGGTTACAGTCCAAGTGCCAACTCTAAGGCATTAAATCAGCAGAGAGTTTTTGGTGCAGAGAATGATCAACAATGTGAAACACATTATGATTCTGATGAAGCTGAAAGTAAGCTCTCTGCATTAGAACCTGAGGACTCAGTCAGTGAAGACAATATTTCCACACTTTTGAAATCGGGCAACATGCCCAAGGAAGAAAAGGAAGGCTATGGAGATAGTGAGCATGGTATGCATGAAGAGAAGTCATTGTCTGAATCAGTTGGATCGATTGATTTCGGCAATATGGAATCTGATTCTGTTGGTTCAACTCCTTTATTTCACAAAAATGAATCATATTGCTGTATTGAATCTCCAACTGACCAGTGTTCAAGAACTAGAACAATTAGGTGTTCATTAAGTTCAGAAGAGTCAGATTCCATAAGCAGTCATTTGGTAGTTGACAGCAGCAAGGCTAAAAGGACTCATGGCGAACATCTCGAGCCTCTTAACGGAAATGGGAAAAGATTTGCTAACGATCCCGAAAAAGAAAGCGATGCCCTCCAAAAGGTCACCTTTGATCAACAATGTGATCTGCTTGCCTGTGATGGGGAGTCTGTATGTTCAAATTGCGACAGTACACCATACTCGAGTTTAACCCCAATAGACAGTGCTTGTGGCAAATTGCCAGCAGTTTCTGAAGATGATAGTGCATGCCGAGGGCTGGAACTCGAATTCCGTTGTGGGAATGAAACGGACGTTTCCCAAAAAGAAGATAAACAGGTGGAATCAGAATATAAAGCTGAAAATGACAGCTCTGCTCAAATGAATGAGAATGATGTTCCCAAATCAGGGAAAGGGATGCTAAAGTCTGTTGCTGGAGGAATTACACTTGTCGGCGCAGTGTTCTTCATAGCTCATCTCAGAAGGAGCAAGGACAGAAGCTTCGCAGGTGTTATAGCTCCATTCTCTGAAAAATCAGTTCAGGGCGACTCAAGGGCAAAGAAAGTAGAGAAAACAAAGGCGGGTGCCGTGTATCCCGGGGAATGGCTAAAAGTTTAA
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| Protein seq | IYERTSSGKSNGKYMPYPKVDSFLKICQILGLAGIDLFTPSDVVEKRNVRKVCMCIRLLSKKARTMRLTVPDFDIVTHTIAMPNYIVGGIRRSLEQPQCSSSGSSGYSPSANSKALNQQRVFGAENDQQCETHYDSDEAESKLSALEPEDSVSEDNISTLLKSGNMPKEEKEGYGDSEHGMHEEKSLSESVGSIDFGNMESDSVGSTPLFHKNESYCCIESPTDQCSRTRTIRCSLSSEESDSISSHLVVDSSKAKRTHGEHLEPLNGNGKRFANDPEKESDALQKVTFDQQCDLLACDGESVCSNCDSTPYSSLTPIDSACGKLPAVSEDDSACRGLELEFRCGNETDVSQKEDKQVESEYKAENDSSAQMNENDVPKSGKGMLKSVAGGITLVGAVFFIAHLRRSKDRSFAGVIAPFSEKSVQGDSRAKKVEKTKAGAVYPGEWLKV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0703300 | RBH | 6.602115 | 8.583200 | 7.009464 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g49630 | RBH | 4.125127 | 4.162911 | 1.529526 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0031530 | RBH | 1.017925 | 5.258626 | 0.283890 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0031230 | RBH | 2.360132 | 0.000000 | 1.913567 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0031320 | RBH | 2.361451 | 0.000000 | 4.669744 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0031410 | RBH | 0.129173 | 0.053600 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0031110 | RBH | 9.892064 | 0.0 | 3.436828 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0487400 | RBH | 3.9384255 | 1.6360795 | 2.104157 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0030780 | RBH | 0.173630 | 0.0 | 1.496534 |
| Zhenshan 97 | ZS97RS3 | HZAU | NA | NA | NA | NA | NA |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0031170 | RBH | 0.801672 | 0.263942 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0031220 | RBH | 0.984785 | 1.366790 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0031180 | RBH | 8.415349 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0030940 | RBH | 0.727774 | 0.212783 | 4.560168 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0030970 | RBH | 1.130305 | 0.387528 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G030960 | RBH | 0.100390 | 0.632015 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0030820 | RBH | 3.735638 | 52.260235 | 5.654400 |
