Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os03g0365200 | OGI:10017890 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr03:14258562-14264654 | ||||||||
| Gene Symbol | GELP47, OsGELP47, - | ||||||||||
| DNA seq | ACTGAGTATGAGAAGTTATATTCCTGCGTAGTGAACAATTGTAATAGTCGTTCAGAATAGTTACAATATATGAAGTTTGGTACCTTTTGTGATGTGACCTTTCAAGTTGTTATCTTACTGTAATAGTTACAATATGGCACAGAAATTGTATCTATACAAATCTACTATAAACTGTTGAGCTAAAGTAATCTTGGTTTTCAAAGTATTCCTGTTGAATCAAATCAGCCCTACAAAAAAAAGAATAAAAAAGCTAAATGTAAAGGTAACAGAAGAAAAAAATTTTAAAAACATATTTTAAAAAAAAGTTAAGATGACTACTTACCTTTGCATAATAGTCAGTAACAAGTTTCTTTGTTGCAGAGTTCAGCATAATGTTGCATGGATGGAAAAACAACTTGTTGACATATTGAATCCTTATGTTAGGAATGTCTTTTTGAGAGAACTGGTTGGTTAGCAGAACTCTTGGACGCCAAATTTCCATGAATTTCAGAGTAAAAATACCACAATCAAGGCTAAAAAAACAGAAATAAAAAAAACATAAGTCATAAATAATAAAAATTACTATAATTAAAATAACATTCAAAGAGTTAACATTTGTAATTTACCGATTTGTTTGTCTTGGACGAGGTGGGTATATTATCTTGAAACTAGCAAAGTTAATTGGATGTTCAGAGACAAATTTCCTCCATACAATTGAAAATTTTGATATCTGACAAAATGAAACAATCATAAAAATAAATTATTCTATACATATAATAATTTGCAAAAAAAAAATCATACCAATCTGCATCTAGCATTGTATTGATAGTCTTCTTCTTCTTCAAATAAGGAGTCAATGAAAACAAAACTCTCATCTTTCAAATCAACAACAAACAGAAACCAATGCCTCAAATGCAATATTGGGAAAAACAGCTGAAAAAATGATACAATAAAAACAAATGTAAAAACAGAGAAATCTAATATAAACTAATTCAATTAAACATTACATAAGTACATACCATGTCACATATCTCAATTGGTCTAGCAAGTGATGCTCTAGAAAAACTCTTTTGGACCATTCCAAAATTAGTTTTTGAAGGGTGTTTCATAAGATCATTCTGAAATAAAAAAATACATACTCAATTTGCAAGTAACAGAGTTGTATTTAATAAAAAAATTAAAAATTACAAACACTAACCCCAATTGAAGAGAAGAAATAGTGTCTTTTGGATTTTGAAGGATGAATCGATTTAAACATATATCGACAGAACACAAACATTACAAAATTTGATAATTCTCCACCTTGTTTGAATGAAGAACCAAAAGATGAGAATTTGCAGTGAACTCCATCAATATTAACAGCTTCTTGACTGCAGTAACAGTACAAAACTTACATATATGAAGAAACTGAAAAAAATTACATGAAAAAATATTTAAAGTTACAGTTTATTTTGCAAGAAAAAAAATGTATGCAGACATTCTAACATGGAGCAGCACATGCTTGCACAAGCATTCAATCACAGCTAAATGTTCAGCAAGTAAATATAAAAGTGTCAAGCTTATCCCATAGCATATCAAAAACTATAAAAAATTAAAGATCATGATCATATAAAACAATAATTTGCAATCAGTCAGAACACACCCTTGTTGGTTATCTTTCTCAAAGGTTTTTCTCTGCCAAAAAAAATTTAAAGAAAAGAAATTAAAAAAACTAAAGAAAAAATTATTCACCAATGTAATAAGGTAATAAAATTACCTTATTTTTAGACTGTTCACCAAGCATGCTTAATTTCATTTTCAAAGAATGGAGAACTAGATCATTGTGAATCTCTAACAATGCATCATCGATAATTGAGTCTGATTCAACTTTATGTCTCTGAAAATAAAAAATATCATATTAAAAAAATAATGTAAATTACAAAAATCTAAATATGCATTAATCATACCTTCTTTTTATGGTCATCTGTAAATGGCCTTTTACCAAGCTTTATTTTCAATTTCTTCATAAGCTCTTCTTTAGTTAAATGAAGCAAAGGATCATTTTCCTCAAAATGTTGGTCCTTAATAAAAAAACAAGAAGATTCAAAAAAAATATTGAAATAAAAAATAAACTTCCATGATAAATGAACATGACAAATGAACTTACATGATTATCAGAACTTTCATCATGATTAGATAAATGAACATCACCATCATGATTATCAGAACTCAAACTACAATCATTGTCACTGTTAGATTCACTAGAAATATCCACTTTTGATCTTTTTCTATGACCCATGACTGCAAGGAGAGAAAAAAAGATCTCAAAACATAAGTATTATGGACTAAAATATATAACAAAACAGAATAAAACATACAAGTTAAATGCACCATGTCATACGAAAATAATATTACTTTCATATAGTAGAAATAATTATTTTCATAGAGTAGTGTCAAATGTGTAGCACAAACTCATGTCATATATCAGAGTATAGTGATGACTAGGAATACTATACTCTTCTCCTTCTGAACAAATGTATTAACAATACTCTTCTCCTTCTGAATACTAAACCTAAGCATGCAAAATGCAGAGACAAAAATTGACTACTATAAAAAACATTCTAGTACAGAAATCTTCAATAACTTGTGTTATTTACTCATGTAAGGTTGTCATTGAAAGATTAAAAATACCAAACTAAAATGCAAATGGCATATAGCATTTGTGGATTTCTAGAAAAAAAAACATCCTGAATCAGTGCATAAACATTCACCTAAATAGCATATAGCATTTTCTTGCATAGATTTAGAAACTGACATCAAAGCATTACTACAAAATCAATCAGTGCACAGAACATGCAAATCAAGGGTATACAGAAGGGTCAACAAATATACATTGCACACATCTAGTTCACAAAAGCAAAAGCACAGATCTAGTTCACAAATGCAAAAAAGCAATCACAAAAAGATATATCTAAAATGAAATGAATCACACATCTAGTCCACATAAACAATATCTAGGGCTAAGAACACAAATCACAACCATAAACATAACAGTACTCTTCTCATTTTGAATACTGAACCTGAACATGGAACATGCATCAGAGACAAAAAAAATTAACAACCATAAATACCATTCTAATAAAGACATAAAACTTGAAACTTAGTACAAACCAGCATATCTTAGTCATGCAAAAAACAACTGATAATATCAATAACAAATTTAACTGCTCATATAAGGTTGTCATTGAATTAACATATAGCATTTGCAGATTTCTAGAATAAAAACATCCTGAATGCATTACTACAAAAACAATCAGTGCATACAGATAGGTGAACATATATACATTACTCCCTTATTTGCACACATCTAGTTCAGAAAAAAGCAAAAAACACAGTTCTAGAACAAAATAAAAAAGCACGTAACTAGTTCACAAAAGCAAAAGCACAGATCTAGTTCACAACTACAACCACATCATGTTCTGTAATTTTCATATAGAAGACAAAAGCAAAAGCGCAGATCTAGTGCACAAGAAGACAATATATAGGGCTAAGAACACAGAGATCACCGAGTCATAAACGAATATGAATCAAGGGGATTCACCATATCAAACACATACATAGATTCCGAGTCGAAACAAACTCAGATCTACAAGCCCCACGAATCGACGACCTAAAACACAAGGGAATATCAGAAAAACGATGGGGAAACTCACCGAAATCAGCTCCAACTTCACAGCCGCGTCGTAGCCACCAGCAAACCAAAGACTACGAGAAGAGAAAAATGAAGAGATGAATCAACACAAGAGCAACAAATAGAAGAAGAAATCGATAAAAAATGGAAAATAAATCTGCCACCTTCACCTCCCGCAAACTGCGCAACAGGACTGCACAATCACCGGATGGAATCGCCACCGCTCCTCCCGACGGAAACGCCGCCGCTCCGCCCGACGGAATCGCCGCCGCGTCGCCTGAGACGACGAGAACGAGAGAAATATCTCTCTCTCTCCCTCTATCTGACTCACTCTCTCTCCGTCGGCACAAAAAAGACAAGCGCGGATTTCAAAATTCGAACAGTGCCCATGGGTCCCACACAGGCTGTCGAAAAGAATTTCTGATGTGGGTCCCACATAATTACCACACACAAAAAAAAGCCCAAAAGCCCAGACACAAATAAAAAGCTCATAAGCCCACACACCGACACTACAAAATGAACTACAAGCCAGTACGAATCACAAAGAAATCCGACGGCTTAAAAAACGAATGATAGAGGCAAGAAAAAACATTCGACTGCCAAATAGCCATCCCGTATAATAATATAGTAATAACTACTACTTAAAAAATCAATAACTCTCCGTTCGTCACATAATTTTTGTGTTCGTCAATCCGTTTTTGTCCGTTTCTTTTTACGCGTTCGTCTGCGAGCGATGCCCTCTGCCCGGACAAGGAACAAATTCAAAATTGATGCAAGATTCAATCGGGATGTCGGACAAAAAATAAAATTAAAAACCAATATAAAATCCAATCAGGTAATCAGTTCTTAGAGAACTCAAGCAGAAGGGAGGAAAGAAAAGAAGGAAAAGAACACACAAATCCAATACCCCAGCTAAGCTTGATAGGATTGCATCGGCAGCGCCTCCTCTGTATAACAAAACAGGGAGGAGCTCTATTCAAGCCGGCTATGACAAAATCACATATTGATGCCTAAATTAATACCGACCGCATGCTAGATCGATGCCTAAATTAATAAAATCATTCTATCTAAGAACTGAATCAAACAGAAGAGATATATCGTTCAGAAGAGATATATCGTTCATGTCTCAGTCACACAAAAGAAACAAATAAAAAAGAATCGTTCATGCCCGTGTGGGACAGATAGAGAGGGAAGTTGTATGTGGCTATGAAAGGGAGAAGAAAGAGATAAGGGGGAGGAGAAAGAGATAAGTCTAGGATGCTATGGGCATGTAGATAAGCAGCAGTAGCAGTTTAGCACCATGAAAATAAACTAAGGCTGAGTTTACTTCTAAACTTTTTCTTCTAACTCTCGACTTTTCCATCAAATCAAAACTTTCTTGCACATACAAACTTCTAACTTTTCCGTCACATCGTTCCAATTTCAATCAAATTTCCAATTTTAGCGTGAACTAAACACAGGCCTTGTTTAGATCCTAAAAATTTTTGGCCAAAAACGTCACATCAAATGTTTGGACACATATATGGGGCATTAATTAAATGGGGAAAAAACCAATTGCACAGTTTGCATGTAAATTGTGAGACGAATCTTTTAAGCCTAATTACGCCATGATTTGACAATGTGATGCTACAGTAAACATTTGCTAATGACGAATTAATTAGGTTTAATAAATTCGTCTCGCAGTTTACAGGCGGAATCTGTAATTTGTTTTGTTATTAGTCTACGTTTAATAGTTCAAATGTGTGTCCGTATACTTAAAAAAAATTTACACCCAAAAAACTAAACACACCCTAATGTTGAATATACTACTGGGTCCGCATCTTGTCAGACTGTCTTTGACTGTTTGAACACAACGGTTAATTGGATCATGACACTGTAATTTTTTTAAGGTTTTGTAATATACCATTATTATTCATCTATTTATAATCATACCATCACAATTATATAAGTATTGGAGACATGGCACTTCCTACCTCTTCACTTCACTTGTCGAAATATTTGGACCAAAAGATACCCGTCCCCTTCCTCCCAAGCTCCAACCAACAAACTCTGATGAGCTCGTGCAGCTGCTAGAAGAGCTGCAACGCAACAGGCTGTCCCCCGCCGGGGAAGCTGGTGCGGAGCGGCGGTTAGTTGCGACCTCCACGAGCTGCAGCCCGCTGCGACGCTGGAATATCAGCTAGCAGCAGAACGCTCGATATGCGCAGCGTGCAATGAGTTGCGGCTAGCAGGCAGGCCTGACGACGTCGTACAAGCGCACGAAGGCCCCGGCGATCGAGCACGCCACAACGAGCGTCCAACGGCAGCGCGTTGCCTCGCAGCATACAAGCACCGCGGTGGACGCTAGGCCGTCGAGGGTCTACCCGCCGGAATACAAGCACGATGCTGCTCGTCTGCTCTGCCCACCAATCCACCATGGTGAGAGGAGTCTGTAGCTAAGCTAG
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| CDS seq | AATCCGCGCTTGTCTTTTTTGTGCCGACGGAGAGAGAGTGAGTCAGATAGAGGGAGAGAGAGAGATATTTCTCTCGTTCTCGTCGTCTCAGGCGACGCGGCGGCGATTCCGTCGGGCGGAGCGGCGGCGTTTCCGTCGGGAGGAGCGGTGGCGATTCCATCCGGTGATTGTGCAGTCCTGTTGCGCAGTTTGCGGGAGGTGAAGTCTTTGGTTTGCTGGTGGCTACGACGCGGCTGTGAAGTTGGAGCTGATTTCGTCATGGGTCATAGAAAAAGATCAAAAGTGGATATTTCTAGTGAATCTAACAGTGACAATGATTGTAGTTTGAGTTCTGATAATCATGATGGTGATGTTCATTTATCTAATCATGATGAAAGTTCTGATAATCATGACCAACATTTTGAGGAAAATGATCCTTTGCTTCATTTAACTAAAGAAGAGCTTATGAAGAAATTGAAAATAAAGCTTGGTAAAAGGCCATTTACAGATGACCATAAAAAGAAGAGACATAAAGTTGAATCAGACTCAATTATCGATGATGCATTGTTAGAGATTCACAATGATCTAGTTCTCCATTCTTTGAAAATGAAATTAAGCATGCTTGGTGAACAGTCTAAAAATAAGTCAAGAAGCTGTTAA
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| Protein seq | NPRLSFLCRRRESESDRGRERDISLVLVVSGDAAAIPSGGAAAFPSGGAVAIPSGDCAVLLRSLREVKSLVCWWLRRGCEVGADFVMGHRKRSKVDISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKEELMKKLKIKLGKRPFTDDHKKKRHKVESDSIIDDALLEIHNDLVLHSLKMKLSMLGEQSKNKSRSC |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os03g0365200 | Os03t0365200-01 | Chr03 | 14258562 | 14264654 | - | irgsp1_rep | ||
| CDS seq | AATCCGCGCTTGTCTTTTTTGTGCCGACGGAGAGAGAGTGAGTCAGATAGAGGGAGAGAGAGAGATATTTCTCTCGTTCTCGTCGTCTCAGGCGACGCGGCGGCGATTCCGTCGGGCGGAGCGGCGGCGTTTCCGTCGGGAGGAGCGGTGGCGATTCCATCCGGTGATTGTGCAGTCCTGTTGCGCAGTTTGCGGGAGGTGAAGTCTTTGGTTTGCTGGTGGCTACGACGCGGCTGTGAAGTTGGAGCTGATTTCGTCATGGGTCATAGAAAAAGATCAAAAGTGGATATTTCTAGTGAATCTAACAGTGACAATGATTGTAGTTTGAGTTCTGATAATCATGATGGTGATGTTCATTTATCTAATCATGATGAAAGTTCTGATAATCATGACCAACATTTTGAGGAAAATGATCCTTTGCTTCATTTAACTAAAGAAGAGCTTATGAAGAAATTGAAAATAAAGCTTGGTAAAAGGCCATTTACAGATGACCATAAAAAGAAGAGACATAAAGTTGAATCAGACTCAATTATCGATGATGCATTGTTAGAGATTCACAATGATCTAGTTCTCCATTCTTTGAAAATGAAATTAAGCATGCTTGGTGAACAGTCTAAAAATAAGTCAAGAAGCTGTTAA
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| Protein seq | NPRLSFLCRRRESESDRGRERDISLVLVVSGDAAAIPSGGAAAFPSGGAVAIPSGDCAVLLRSLREVKSLVCWWLRRGCEVGADFVMGHRKRSKVDISSESNSDNDCSLSSDNHDGDVHLSNHDESSDNHDQHFEENDPLLHLTKEELMKKLKIKLGKRPFTDDHKKKRHKVESDSIIDDALLEIHNDLVLHSLKMKLSMLGEQSKNKSRSC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0365200 | RBH | 0.134737 | 0.069088 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g24960 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0018830 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0018660 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0018690 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0018740 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0018510 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0088300 | RBH | 0.008284 | 0.013857 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0018340 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0441500 | RBH | 7.9324245 | 23.1995685 | 29.2589075 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0018560 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0018590 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0018650 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0018520 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0018430 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G018460 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0018380 | RBH | 0.000000 | 0.0 | 0.000000 |
