Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os03g0152300 | OGI:03007660 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr03:2878831-2880830 | ||||||||
| Gene Symbol | prx36 | ||||||||||
| DNA seq | GCACGATACTGGACCCCTCGTGATGGACACCCGCCTCCCCCTCCTCCTCCTCCTCGCCGGCGTCGTCGCCGCCGCGGCGCCACTGCTCGCCACCGCCCAGCTCTCCGCCGACTTCTACTCCTCCACCTGCCCCAACGTCGAGAAGGTCGTCTCCACCGTCATCGAGCGCAAGTTCAAGGAGGACCCTACCACCTCCGCCCTCCTCCTCCGCCTCCTCTTCCACGACTGCTTCGCCAATGTACGTTCACGTTCTACGACCTTGCCCGCCGCCGGCAATGGCGGATGCTGACTTGCATGTGATGTTGGATGCGTGCGTGCGTGTGCGTGTGTGGGTGGTGTAGGGATGCGACGCGTCGATCTTGATCGACCCGCTGTCGAACCAGAGCGCGGAGAAGGAGGCGGGGCCGAACATCTCGGTGAAGGGCTACGACATCATCGACGAGATCAAGACGGAGCTGGAGAAGGAGTGCCCGCAGGTGGTGTCGTGCGCGGACATCGTGGCGCTCAGCACGCGCGACAGCGTGCGCCTCGCCGGGGGCCCCAACTACGACGTGCCCACCGGCCGCCGCGACTCGCTCGTCTCCAACCGCGAGGAAGGCGACTCGCTCCCCGGCCCGGACATCGCCGTCCCGAAGCTCATGGCGCAGTTCTCCGAGAAGGGGTTCAGCGCCGACGAGATGGTCGTCCTCCTCGCCGGCGGCCACTCCATCGGCAAGGCCAAGTGCTTCTTCATCGAGGTCGACGCGGCGCCCATCGACCCGACCTACCGCTCCAACATCACCGCCTTCTGCGACGGCAAGGACGGCGACAAGGGAGCCGTCCCCCTTGATCCCATCACCCCCGACGTCGTCGACCCCAACTACTTCGAACTCGTCATGGACAAGAAGATGCCGCTCACCATCGACCGCCTCATGGGGATGGACGCAAGAACGAAGCCCATCGTGGAGTCCATGGGTAAAAAGACCGACCAGTTCGACGCCACCTTCGGCAAGGCCATGACGAAGCTCAGCGGCATGAAGGTCATCACCGGCAAGGACGGCGAGATCAGGAAATCGTGCTCCGAGTTCAACAACCCGGTGAACACCGACGACGGCCCGTCCGTCATCCGGATCAGCTCGCTGAACCCCGAGGAGATGATGGGCTCCTTTGCGCCGGCCACCGGGAAGTCCCCCTCCGCCGCCTCGGAGTCCAGGAAGGTGGCACCAGGCGGCGCCATGGAGGAAAGGATGGCGGCCGGTGAGGCGAAGACGGATGCTTCAGGCGGCGCCATGGCGGAAAGGTTGGCGGCCGGTGAGGCGAAGACGGCTGCTGCGGCCTCCGAGGATGAAAACCAAGCGGCAGCTGGTGGCGCCGCCGGCGATGAGGCGGCGGCGGAGGAGGAGGGGACCAAGTCCAACAAGAAGAAGGCCGAGCGGGTGACCGCAGAAGTACCTGCCGACGAGGCGGCGCCGGCGGCAAAGAAGCCGAGGGCGATGGGCGGACAATCGTTCAGCATGGCCGGCGCCGGCGCCGGCGGCGAGCCGGCGAAGAAGTCGACGGCGATGAAGAGCCAATCCTTCAGCATGGCGGGCCAGCCGCAACAGTAGACGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGCCGCGCTGCTAGCTGAGCCGTTCGCACGGCGGCCTGATCGAGCGCGCATTGCCATTTATCGTTTTTGATTTTCTCACTCTCTCTCTCGCCTGTTTGTAGAAGGGACGAGCATACTACTACCGCTAATTACTAGGCTTAATTTTGCAAGTAATGTCGTGTCGAGTTTTTTTTAACAGCGACCAAAAGCTCGATGATATTTTCTCTTTTCATTTTCCCTTTTTTTTTTGTCATTCTTGTTAAGAATTCGTTGCCAACTCAATCTGGCTGGCAAATAAAAGTGTATTAAATTTCCCCTTTTTATATAGAGAGACAGGTACACAATTGTAATTGTTTTTTTAGATCAACCAATGCATGTGAAACGATATACGTGCTACT
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| CDS seq | ATGGACACCCGCCTCCCCCTCCTCCTCCTCCTCGCCGGCGTCGTCGCCGCCGCGGCGCCACTGCTCGCCACCGCCCAGCTCTCCGCCGACTTCTACTCCTCCACCTGCCCCAACGTCGAGAAGGTCGTCTCCACCGTCATCGAGCGCAAGTTCAAGGAGGACCCTACCACCTCCGCCCTCCTCCTCCGCCTCCTCTTCCACGACTGCTTCGCCAATGGATGCGACGCGTCGATCTTGATCGACCCGCTGTCGAACCAGAGCGCGGAGAAGGAGGCGGGGCCGAACATCTCGGTGAAGGGCTACGACATCATCGACGAGATCAAGACGGAGCTGGAGAAGGAGTGCCCGCAGGTGGTGTCGTGCGCGGACATCGTGGCGCTCAGCACGCGCGACAGCGTGCGCCTCGCCGGGGGCCCCAACTACGACGTGCCCACCGGCCGCCGCGACTCGCTCGTCTCCAACCGCGAGGAAGGCGACTCGCTCCCCGGCCCGGACATCGCCGTCCCGAAGCTCATGGCGCAGTTCTCCGAGAAGGGGTTCAGCGCCGACGAGATGGTCGTCCTCCTCGCCGGCGGCCACTCCATCGGCAAGGCCAAGTGCTTCTTCATCGAGGTCGACGCGGCGCCCATCGACCCGACCTACCGCTCCAACATCACCGCCTTCTGCGACGGCAAGGACGGCGACAAGGGAGCCGTCCCCCTTGATCCCATCACCCCCGACGTCGTCGACCCCAACTACTTCGAACTCGTCATGGACAAGAAGATGCCGCTCACCATCGACCGCCTCATGGGGATGGACGCAAGAACGAAGCCCATCGTGGAGTCCATGGGTAAAAAGACCGACCAGTTCGACGCCACCTTCGGCAAGGCCATGACGAAGCTCAGCGGCATGAAGGTCATCACCGGCAAGGACGGCGAGATCAGGAAATCGTGCTCCGAGTTCAACAACCCGGTGAACACCGACGACGGCCCGTCCGTCATCCGGATCAGCTCGCTGAACCCCGAGGAGATGATGGGCTCCTTTGCGCCGGCCACCGGGAAGTCCCCCTCCGCCGCCTCGGAGTCCAGGAAGGTGGCACCAGGCGGCGCCATGGAGGAAAGGATGGCGGCCGGTGAGGCGAAGACGGATGCTTCAGGCGGCGCCATGGCGGAAAGGTTGGCGGCCGGTGAGGCGAAGACGGCTGCTGCGGCCTCCGAGGATGAAAACCAAGCGGCAGCTGGTGGCGCCGCCGGCGATGAGGCGGCGGCGGAGGAGGAGGGGACCAAGTCCAACAAGAAGAAGGCCGAGCGGGTGACCGCAGAAGTACCTGCCGACGAGGCGGCGCCGGCGGCAAAGAAGCCGAGGGCGATGGGCGGACAATCGTTCAGCATGGCCGGCGCCGGCGCCGGCGGCGAGCCGGCGAAGAAGTCGACGGCGATGAAGAGCCAATCCTTCAGCATGGCGGGCCAGCCGCAACAGTAG
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| Protein seq | MDTRLPLLLLLAGVVAAAAPLLATAQLSADFYSSTCPNVEKVVSTVIERKFKEDPTTSALLLRLLFHDCFANGCDASILIDPLSNQSAEKEAGPNISVKGYDIIDEIKTELEKECPQVVSCADIVALSTRDSVRLAGGPNYDVPTGRRDSLVSNREEGDSLPGPDIAVPKLMAQFSEKGFSADEMVVLLAGGHSIGKAKCFFIEVDAAPIDPTYRSNITAFCDGKDGDKGAVPLDPITPDVVDPNYFELVMDKKMPLTIDRLMGMDARTKPIVESMGKKTDQFDATFGKAMTKLSGMKVITGKDGEIRKSCSEFNNPVNTDDGPSVIRISSLNPEEMMGSFAPATGKSPSAASESRKVAPGGAMEERMAAGEAKTDASGGAMAERLAAGEAKTAAAASEDENQAAAGGAAGDEAAAEEEGTKSNKKKAERVTAEVPADEAAPAAKKPRAMGGQSFSMAGAGAGGEPAKKSTAMKSQSFSMAGQPQQ |
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| Function | Peroxidase 44 [UniProtKB/Swiss-Prot:Q93V93] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os03g0152300 | Os03t0152300-01 | Chr03 | 2878831 | 2880830 | + | irgsp1_rep | ||
| CDS seq | ATGGACACCCGCCTCCCCCTCCTCCTCCTCCTCGCCGGCGTCGTCGCCGCCGCGGCGCCACTGCTCGCCACCGCCCAGCTCTCCGCCGACTTCTACTCCTCCACCTGCCCCAACGTCGAGAAGGTCGTCTCCACCGTCATCGAGCGCAAGTTCAAGGAGGACCCTACCACCTCCGCCCTCCTCCTCCGCCTCCTCTTCCACGACTGCTTCGCCAATGGATGCGACGCGTCGATCTTGATCGACCCGCTGTCGAACCAGAGCGCGGAGAAGGAGGCGGGGCCGAACATCTCGGTGAAGGGCTACGACATCATCGACGAGATCAAGACGGAGCTGGAGAAGGAGTGCCCGCAGGTGGTGTCGTGCGCGGACATCGTGGCGCTCAGCACGCGCGACAGCGTGCGCCTCGCCGGGGGCCCCAACTACGACGTGCCCACCGGCCGCCGCGACTCGCTCGTCTCCAACCGCGAGGAAGGCGACTCGCTCCCCGGCCCGGACATCGCCGTCCCGAAGCTCATGGCGCAGTTCTCCGAGAAGGGGTTCAGCGCCGACGAGATGGTCGTCCTCCTCGCCGGCGGCCACTCCATCGGCAAGGCCAAGTGCTTCTTCATCGAGGTCGACGCGGCGCCCATCGACCCGACCTACCGCTCCAACATCACCGCCTTCTGCGACGGCAAGGACGGCGACAAGGGAGCCGTCCCCCTTGATCCCATCACCCCCGACGTCGTCGACCCCAACTACTTCGAACTCGTCATGGACAAGAAGATGCCGCTCACCATCGACCGCCTCATGGGGATGGACGCAAGAACGAAGCCCATCGTGGAGTCCATGGGTAAAAAGACCGACCAGTTCGACGCCACCTTCGGCAAGGCCATGACGAAGCTCAGCGGCATGAAGGTCATCACCGGCAAGGACGGCGAGATCAGGAAATCGTGCTCCGAGTTCAACAACCCGGTGAACACCGACGACGGCCCGTCCGTCATCCGGATCAGCTCGCTGAACCCCGAGGAGATGATGGGCTCCTTTGCGCCGGCCACCGGGAAGTCCCCCTCCGCCGCCTCGGAGTCCAGGAAGGTGGCACCAGGCGGCGCCATGGAGGAAAGGATGGCGGCCGGTGAGGCGAAGACGGATGCTTCAGGCGGCGCCATGGCGGAAAGGTTGGCGGCCGGTGAGGCGAAGACGGCTGCTGCGGCCTCCGAGGATGAAAACCAAGCGGCAGCTGGTGGCGCCGCCGGCGATGAGGCGGCGGCGGAGGAGGAGGGGACCAAGTCCAACAAGAAGAAGGCCGAGCGGGTGACCGCAGAAGTACCTGCCGACGAGGCGGCGCCGGCGGCAAAGAAGCCGAGGGCGATGGGCGGACAATCGTTCAGCATGGCCGGCGCCGGCGCCGGCGGCGAGCCGGCGAAGAAGTCGACGGCGATGAAGAGCCAATCCTTCAGCATGGCGGGCCAGCCGCAACAGTAG
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| Protein seq | MDTRLPLLLLLAGVVAAAAPLLATAQLSADFYSSTCPNVEKVVSTVIERKFKEDPTTSALLLRLLFHDCFANGCDASILIDPLSNQSAEKEAGPNISVKGYDIIDEIKTELEKECPQVVSCADIVALSTRDSVRLAGGPNYDVPTGRRDSLVSNREEGDSLPGPDIAVPKLMAQFSEKGFSADEMVVLLAGGHSIGKAKCFFIEVDAAPIDPTYRSNITAFCDGKDGDKGAVPLDPITPDVVDPNYFELVMDKKMPLTIDRLMGMDARTKPIVESMGKKTDQFDATFGKAMTKLSGMKVITGKDGEIRKSCSEFNNPVNTDDGPSVIRISSLNPEEMMGSFAPATGKSPSAASESRKVAPGGAMEERMAAGEAKTDASGGAMAERLAAGEAKTAAAASEDENQAAAGGAAGDEAAAEEEGTKSNKKKAERVTAEVPADEAAPAAKKPRAMGGQSFSMAGAGAGGEPAKKSTAMKSQSFSMAGQPQQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0152300 | RBH | 0.0 | 0.0 | 26.390594 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g05770 | RBH | 0.0 | 0.0 | 6.575092 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0004030 | RBH | 0.0 | 0.0 | 23.630095 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0003950 | RBH | 0.0 | 0.0 | 30.419088 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0003990 | RBH | 0.0 | 0.0 | 41.237720 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0003940 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0004040 | RBH | 0.0 | 0.0 | 82.438393 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0046400 | RBH | 0.006577 | 0 | 0.0746665 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0003930 | RBH | 0.0 | 0.0 | 17.086309 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0046800 | RBH | 0.0082705 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0004040 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0004010 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0003980 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_03g0004040 | RBH | 0.0 | 0.0 | 5.996913 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0004020 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G003990 | RBH | 0.0 | 0.0 | 9.905877 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0003850 | RBH | 0.0 | 0.0 | 75.526115 |
